Literature DB >> 21580177

(2S,6S)-1-Methyl-2,6-trans-distyryl-piperidinium chloride.

Guangrong Zheng, Sean Parkin, Linda P Dwoskin, Peter A Crooks.   

Abstract

In the crystal structure of the title compound, C(22)H(26)N(+)·Cl(-), the piperidine ring is in a chair conformation and the two styryl groups are in axial and equatorial positions. The mol-ecule has a hydrogen bond between the NH group and the chloride anion.

Entities:  

Year:  2009        PMID: 21580177      PMCID: PMC2980042          DOI: 10.1107/S1600536809049587

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

The title compound is a des-oxygen derivative of epimerized (−)-lobeline (Zheng et al., 2005 ▶).

Experimental

Crystal data

C22H26NCl− M = 339.89 Orthorhombic, a = 9.9355 (4) Å b = 12.3075 (5) Å c = 15.8299 (7) Å V = 1935.70 (14) Å3 Z = 4 Mo Kα radiation μ = 0.20 mm−1 T = 173 K 0.38 × 0.28 × 0.08 mm

Data collection

Nonius KappaCCD diffractometer Absorption correction: multi-scan (SCALEPACK; Otwinowski & Minor, 1997 ▶) T min = 0.930, T max = 0.984 11921 measured reflections 3416 independent reflections 2957 reflections with I > 2σ(I) R int = 0.065

Refinement

R[F 2 > 2σ(F 2)] = 0.054 wR(F 2) = 0.091 S = 1.11 3416 reflections 218 parameters H-atom parameters constrained Δρmax = 0.45 e Å−3 Δρmin = −0.26 e Å−3 Absolute structure: Flack (1983 ▶), 1457 Friedel pairs Flack parameter: 0.06 (7) Data collection: COLLECT (Nonius, 1998 ▶); cell refinement: SCALEPACK (Otwinowski & Minor, 1997 ▶); data reduction: DENZO-SMN (Otwinowski & Minor, 1997 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP in Siemens SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97 and local procedures. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809049587/hg2599sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809049587/hg2599Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C22H26N+·ClF(000) = 728
Mr = 339.89Dx = 1.166 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 21849 reflections
a = 9.9355 (4) Åθ = 1.0–27.5°
b = 12.3075 (5) ŵ = 0.20 mm1
c = 15.8299 (7) ÅT = 173 K
V = 1935.70 (14) Å3Irregular plates, colourless
Z = 40.38 × 0.28 × 0.08 mm
Nonius KappaCCD diffractometer3416 independent reflections
Radiation source: fine-focus sealed tube2957 reflections with I > 2σ(I)
graphiteRint = 0.065
Detector resolution: 18 pixels mm-1θmax = 25.0°, θmin = 2.1°
ω scans at fixed χ = 55°h = −11→11
Absorption correction: multi-scan (SCALEPACK; Otwinowski & Minor, 1997)k = −14→14
Tmin = 0.930, Tmax = 0.984l = −18→18
11921 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.054H-atom parameters constrained
wR(F2) = 0.091w = 1/[σ2(Fo2) + (0.0332P)2 + 0.1721P] where P = (Fo2 + 2Fc2)/3
S = 1.11(Δ/σ)max = 0.001
3416 reflectionsΔρmax = 0.45 e Å3
218 parametersΔρmin = −0.26 e Å3
0 restraintsAbsolute structure: Flack (1983), 1457 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.06 (7)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl0.49125 (6)1.13417 (4)0.35616 (4)0.03556 (19)
N10.44499 (17)0.82481 (15)0.25784 (13)0.0275 (5)
H10.46610.76430.22530.033*
C10.4017 (3)0.9121 (2)0.19752 (16)0.0358 (7)
H1A0.31440.89280.17290.054*
H1B0.46870.91920.15240.054*
H1C0.39380.98120.22780.054*
C20.3304 (2)0.79138 (19)0.31510 (17)0.0305 (6)
H20.25790.76070.27830.037*
C30.3774 (3)0.7007 (2)0.37336 (17)0.0372 (7)
H3A0.30350.68120.41250.045*
H3B0.39910.63560.33920.045*
C40.5004 (3)0.7336 (2)0.42414 (16)0.0395 (7)
H4A0.47800.79580.46120.047*
H4B0.52980.67240.46020.047*
C50.6127 (2)0.76520 (19)0.36400 (16)0.0331 (6)
H5A0.63900.70080.33040.040*
H5B0.69200.78840.39720.040*
C60.5726 (2)0.85631 (19)0.30435 (15)0.0272 (6)
H60.55450.92320.33830.033*
C70.6841 (2)0.87992 (19)0.24306 (15)0.0292 (6)
H70.70390.82830.20020.035*
C80.7558 (2)0.9709 (2)0.24688 (15)0.0283 (6)
H80.72601.02410.28610.034*
C90.8759 (2)0.9986 (2)0.19738 (15)0.0281 (6)
C100.9516 (2)1.0897 (2)0.22012 (17)0.0342 (7)
H100.92371.13270.26670.041*
C111.0659 (2)1.1182 (2)0.17623 (18)0.0391 (7)
H111.11641.18000.19320.047*
C121.1074 (3)1.0578 (2)0.10788 (17)0.0444 (8)
H121.18591.07800.07750.053*
C131.0347 (3)0.9682 (2)0.08396 (17)0.0460 (8)
H131.06290.92660.03660.055*
C140.9202 (3)0.9378 (2)0.12838 (17)0.0419 (7)
H140.87150.87500.11160.050*
C150.2714 (2)0.88730 (18)0.36100 (16)0.0278 (6)
H150.33000.93780.38750.033*
C160.1402 (2)0.90289 (19)0.36523 (17)0.0307 (6)
H160.08560.85200.33590.037*
C170.0685 (2)0.9906 (2)0.41046 (14)0.0257 (6)
C18−0.0696 (2)0.9803 (2)0.42416 (15)0.0312 (6)
H18−0.11470.91670.40540.037*
C19−0.1417 (3)1.0608 (2)0.46452 (16)0.0383 (7)
H19−0.23591.05270.47290.046*
C20−0.0774 (3)1.1519 (2)0.49227 (17)0.0390 (7)
H20−0.12691.20710.52040.047*
C210.0595 (3)1.1644 (2)0.47978 (16)0.0342 (7)
H210.10371.22780.49980.041*
C220.1322 (3)1.0848 (2)0.43814 (15)0.0290 (6)
H220.22581.09450.42840.035*
U11U22U33U12U13U23
Cl0.0428 (4)0.0231 (3)0.0408 (4)−0.0033 (3)0.0079 (3)−0.0019 (3)
N10.0250 (11)0.0208 (11)0.0369 (12)0.0017 (9)0.0023 (10)−0.0077 (10)
C10.0337 (16)0.0357 (15)0.0379 (16)0.0067 (13)−0.0034 (13)−0.0001 (14)
C20.0190 (14)0.0247 (14)0.0478 (16)−0.0070 (11)0.0024 (13)−0.0055 (13)
C30.0334 (16)0.0283 (15)0.0500 (18)−0.0045 (12)0.0089 (14)0.0034 (14)
C40.0414 (16)0.0329 (14)0.0442 (17)0.0019 (15)0.0055 (16)0.0147 (13)
C50.0243 (14)0.0306 (15)0.0445 (17)0.0002 (12)−0.0047 (13)0.0062 (14)
C60.0194 (13)0.0244 (14)0.0377 (15)−0.0057 (12)−0.0040 (12)−0.0056 (13)
C70.0256 (13)0.0319 (15)0.0301 (15)0.0050 (13)−0.0009 (12)−0.0023 (13)
C80.0236 (14)0.0294 (15)0.0319 (15)0.0007 (12)−0.0023 (12)−0.0012 (13)
C90.0218 (14)0.0360 (16)0.0264 (14)0.0004 (12)−0.0029 (12)0.0050 (13)
C100.0288 (15)0.0325 (15)0.0412 (16)0.0026 (12)−0.0026 (13)0.0033 (13)
C110.0294 (15)0.0356 (17)0.0523 (19)−0.0086 (13)−0.0001 (14)0.0098 (16)
C120.0300 (16)0.061 (2)0.0427 (18)−0.0069 (16)0.0042 (14)0.0142 (16)
C130.0379 (18)0.066 (2)0.0339 (17)−0.0039 (16)0.0074 (14)−0.0072 (15)
C140.0347 (16)0.0530 (18)0.0380 (18)−0.0100 (14)−0.0044 (14)−0.0036 (16)
C150.0241 (14)0.0235 (14)0.0359 (15)−0.0025 (11)0.0007 (12)−0.0038 (12)
C160.0280 (15)0.0262 (14)0.0379 (15)−0.0046 (11)−0.0065 (13)−0.0035 (13)
C170.0231 (14)0.0276 (15)0.0265 (14)0.0052 (12)−0.0040 (11)0.0030 (12)
C180.0238 (15)0.0347 (16)0.0350 (15)−0.0033 (13)−0.0051 (12)−0.0003 (13)
C190.0237 (15)0.0502 (19)0.0410 (18)0.0055 (14)0.0035 (13)−0.0038 (15)
C200.0382 (18)0.0449 (19)0.0338 (16)0.0115 (15)0.0034 (13)−0.0065 (15)
C210.0378 (17)0.0297 (17)0.0352 (16)−0.0010 (13)0.0011 (13)−0.0052 (13)
C220.0224 (14)0.0335 (15)0.0311 (15)−0.0016 (12)0.0019 (12)0.0009 (13)
N1—C11.500 (3)C9—C101.397 (3)
N1—C21.512 (3)C10—C111.377 (3)
N1—C61.517 (3)C10—H100.9500
N1—H10.9300C11—C121.376 (3)
C1—H1A0.9800C11—H110.9500
C1—H1B0.9800C12—C131.371 (4)
C1—H1C0.9800C12—H120.9500
C2—C151.505 (3)C13—C141.389 (3)
C2—C31.522 (3)C13—H130.9500
C2—H21.0000C14—H140.9500
C3—C41.518 (3)C15—C161.320 (3)
C3—H3A0.9900C15—H150.9500
C3—H3B0.9900C16—C171.478 (3)
C4—C51.517 (3)C16—H160.9500
C4—H4A0.9900C17—C221.392 (3)
C4—H4B0.9900C17—C181.394 (3)
C5—C61.519 (3)C18—C191.380 (3)
C5—H5A0.9900C18—H180.9500
C5—H5B0.9900C19—C201.363 (4)
C6—C71.501 (3)C19—H190.9500
C6—H61.0000C20—C211.383 (3)
C7—C81.329 (3)C20—H200.9500
C7—H70.9500C21—C221.384 (3)
C8—C91.468 (3)C21—H210.9500
C8—H80.9500C22—H220.9500
C9—C141.395 (3)
C1—N1—C2111.13 (18)C7—C8—C9127.4 (2)
C1—N1—C6111.45 (18)C7—C8—H8116.3
C2—N1—C6114.09 (19)C9—C8—H8116.3
C1—N1—H1106.5C14—C9—C10117.5 (2)
C2—N1—H1106.5C14—C9—C8123.4 (2)
C6—N1—H1106.5C10—C9—C8119.1 (2)
N1—C1—H1A109.5C11—C10—C9121.2 (3)
N1—C1—H1B109.5C11—C10—H10119.4
H1A—C1—H1B109.5C9—C10—H10119.4
N1—C1—H1C109.5C12—C11—C10120.4 (3)
H1A—C1—H1C109.5C12—C11—H11119.8
H1B—C1—H1C109.5C10—C11—H11119.8
C15—C2—N1111.67 (18)C13—C12—C11119.6 (3)
C15—C2—C3113.7 (2)C13—C12—H12120.2
N1—C2—C3109.39 (19)C11—C12—H12120.2
C15—C2—H2107.2C12—C13—C14120.6 (3)
N1—C2—H2107.2C12—C13—H13119.7
C3—C2—H2107.2C14—C13—H13119.7
C4—C3—C2111.81 (19)C13—C14—C9120.7 (3)
C4—C3—H3A109.3C13—C14—H14119.7
C2—C3—H3A109.3C9—C14—H14119.7
C4—C3—H3B109.3C16—C15—C2121.6 (2)
C2—C3—H3B109.3C16—C15—H15119.2
H3A—C3—H3B107.9C2—C15—H15119.2
C5—C4—C3109.2 (2)C15—C16—C17127.4 (2)
C5—C4—H4A109.8C15—C16—H16116.3
C3—C4—H4A109.8C17—C16—H16116.3
C5—C4—H4B109.8C22—C17—C18118.3 (2)
C3—C4—H4B109.8C22—C17—C16122.8 (2)
H4A—C4—H4B108.3C18—C17—C16118.9 (2)
C4—C5—C6112.74 (19)C19—C18—C17121.2 (3)
C4—C5—H5A109.0C19—C18—H18119.4
C6—C5—H5A109.0C17—C18—H18119.4
C4—C5—H5B109.0C20—C19—C18119.7 (2)
C6—C5—H5B109.0C20—C19—H19120.1
H5A—C5—H5B107.8C18—C19—H19120.1
C7—C6—N1110.65 (18)C19—C20—C21120.5 (3)
C7—C6—C5110.60 (19)C19—C20—H20119.8
N1—C6—C5109.39 (19)C21—C20—H20119.8
C7—C6—H6108.7C20—C21—C22120.2 (3)
N1—C6—H6108.7C20—C21—H21119.9
C5—C6—H6108.7C22—C21—H21119.9
C8—C7—C6122.0 (2)C21—C22—C17120.1 (2)
C8—C7—H7119.0C21—C22—H22119.9
C6—C7—H7119.0C17—C22—H22119.9
C1—N1—C2—C15−54.9 (3)C8—C9—C10—C11179.3 (2)
C6—N1—C2—C1572.2 (2)C9—C10—C11—C120.7 (4)
C1—N1—C2—C3178.35 (18)C10—C11—C12—C13−0.4 (4)
C6—N1—C2—C3−54.6 (3)C11—C12—C13—C14−0.4 (4)
C15—C2—C3—C4−69.2 (3)C12—C13—C14—C90.9 (4)
N1—C2—C3—C456.4 (3)C10—C9—C14—C13−0.6 (4)
C2—C3—C4—C5−58.0 (3)C8—C9—C14—C13180.0 (2)
C3—C4—C5—C657.4 (3)N1—C2—C15—C16133.2 (3)
C1—N1—C6—C7−57.5 (2)C3—C2—C15—C16−102.5 (3)
C2—N1—C6—C7175.62 (18)C2—C15—C16—C17177.6 (2)
C1—N1—C6—C5−179.60 (19)C15—C16—C17—C2216.4 (4)
C2—N1—C6—C553.5 (2)C15—C16—C17—C18−165.4 (3)
C4—C5—C6—C7−176.7 (2)C22—C17—C18—C19−0.4 (4)
C4—C5—C6—N1−54.6 (3)C16—C17—C18—C19−178.7 (2)
N1—C6—C7—C8129.0 (2)C17—C18—C19—C20−0.5 (4)
C5—C6—C7—C8−109.6 (3)C18—C19—C20—C210.4 (4)
C6—C7—C8—C9172.7 (2)C19—C20—C21—C220.6 (4)
C7—C8—C9—C1410.4 (4)C20—C21—C22—C17−1.5 (4)
C7—C8—C9—C10−169.0 (2)C18—C17—C22—C211.4 (4)
C14—C9—C10—C11−0.2 (3)C16—C17—C22—C21179.7 (2)
D—H···AD—HH···AD···AD—H···A
N1—H1···Cli0.932.103.027 (2)176
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯Cli0.932.103.027 (2)176

Symmetry code: (i) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Defunctionalized lobeline analogues: structure-activity of novel ligands for the vesicular monoamine transporter.

Authors:  Guangrong Zheng; Linda P Dwoskin; Agripina G Deaciuc; Seth D Norrholm; Peter A Crooks
Journal:  J Med Chem       Date:  2005-08-25       Impact factor: 7.446

  2 in total
  1 in total

1.  Synthesis of Lobeline, Lobelane and their Analogues. A Review.

Authors:  Guangrong Zheng; Peter A Crooks
Journal:  Org Prep Proced Int       Date:  2015-08-17       Impact factor: 1.628

  1 in total

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