Literature DB >> 21580152

4,7-Diphenyl-2,9-bis-(trichloro-meth-yl)-1,10-phenanthroline.

Min-Hao Xie1, Ya-Ling Liu, Pei Zou, Yong-Jun He, Biao Huang.   

Abstract

In the title compound, C(26)H(14)Cl(6)N(2), the phenanthroline ring system is essentially planar, with an r.m.s. deviation of 0.048 (6) Å, and makes dihedral angles of 64.8 (14) and 66.6 (6)° with the two terminal phenyl rings. One of the trichloro-methyl groups is disordered over two positions, with occupancies of 0.42 (2) and 0.58 (2).

Entities:  

Year:  2009        PMID: 21580152      PMCID: PMC2980224          DOI: 10.1107/S1600536809051071

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For 4,7-bis­(chloro­sulfophen­yl)-1,10-phenanthroline-2,9-dicarboxylic acid, see: Evangelista et al. (1988 ▶); Papanastasiou-Diamandi et al. (1989 ▶); Scorilas & Diamandis (2000 ▶). For a related structure, see: Wang et al. (2007 ▶).

Experimental

Crystal data

C26H14Cl6N2 M = 567.09 Monoclinic, a = 11.253 (2) Å b = 19.789 (4) Å c = 11.299 (2) Å β = 106.544 (3)° V = 2411.9 (8) Å3 Z = 4 Mo Kα radiation μ = 0.73 mm−1 T = 133 K 0.30 × 0.27 × 0.20 mm

Data collection

Rigaku SPIDER diffractometer Absorption correction: multi-scan (ABSCOR, Higashi, 1995 ▶) T min = 0.810, T max = 0.867 19334 measured reflections 5453 independent reflections 4573 reflections with I > 2σ(I) R int = 0.031

Refinement

R[F 2 > 2σ(F 2)] = 0.033 wR(F 2) = 0.080 S = 1.00 5453 reflections 335 parameters 6 restraints H-atom parameters constrained Δρmax = 0.35 e Å−3 Δρmin = −0.31 e Å−3 Data collection: RAPID-AUTO (Rigaku 2004 ▶); cell refinement: RAPID-AUTO; data reduction: RAPID-AUTO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809051071/is2495sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809051071/is2495Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C26H14Cl6N2F(000) = 1144
Mr = 567.09Dx = 1.562 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 7807 reflections
a = 11.253 (2) Åθ = 3.0–27.5°
b = 19.789 (4) ŵ = 0.73 mm1
c = 11.299 (2) ÅT = 133 K
β = 106.544 (3)°Block, colourless
V = 2411.9 (8) Å30.30 × 0.27 × 0.20 mm
Z = 4
Rigaku SPIDER diffractometer5453 independent reflections
Radiation source: Rotating Anode4573 reflections with I > 2σ(I)
graphiteRint = 0.031
ω scansθmax = 27.5°, θmin = 3.1°
Absorption correction: multi-scan (ABSCOR, Higashi, 1995)h = −14→14
Tmin = 0.810, Tmax = 0.867k = −25→25
19334 measured reflectionsl = −11→14
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.033Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.080H-atom parameters constrained
S = 1.00w = 1/[σ2(Fo2) + (0.0386P)2 + 0.845P] where P = (Fo2 + 2Fc2)/3
5453 reflections(Δ/σ)max = 0.001
335 parametersΔρmax = 0.35 e Å3
6 restraintsΔρmin = −0.31 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
Cl10.77991 (4)0.20665 (2)0.26183 (5)0.03026 (12)
Cl20.87385 (4)0.34261 (2)0.28505 (4)0.02826 (11)
Cl30.70433 (4)0.29867 (3)0.05663 (4)0.03175 (12)
Cl40.8632 (9)0.5763 (2)0.7849 (9)0.0382 (18)0.42 (2)
Cl50.9336 (8)0.4395 (4)0.8454 (7)0.0288 (11)0.42 (2)
Cl60.9431 (4)0.4847 (7)0.6140 (4)0.0361 (12)0.42 (2)
Cl4'0.8577 (6)0.57471 (16)0.7930 (5)0.0220 (7)0.58 (2)
Cl5'0.9403 (6)0.4374 (3)0.8367 (6)0.0398 (12)0.58 (2)
Cl6'0.9246 (6)0.5098 (5)0.6005 (4)0.0377 (11)0.58 (2)
N10.65388 (13)0.35117 (7)0.36420 (13)0.0176 (3)
N20.69870 (13)0.43350 (7)0.56595 (13)0.0189 (3)
C10.63101 (15)0.31204 (8)0.26646 (15)0.0184 (3)
C20.51453 (16)0.28295 (9)0.20857 (16)0.0206 (4)
H20.50270.25670.13570.025*
C30.41832 (15)0.29307 (8)0.25905 (16)0.0187 (3)
C40.44090 (15)0.33316 (8)0.36810 (15)0.0175 (3)
C50.34884 (15)0.34379 (8)0.43131 (15)0.0186 (3)
H50.26900.32430.39930.022*
C60.37361 (15)0.38123 (9)0.53598 (15)0.0189 (3)
H60.31130.38670.57700.023*
C70.49177 (15)0.41274 (8)0.58584 (15)0.0177 (3)
C80.52306 (15)0.44919 (9)0.69909 (16)0.0193 (3)
C90.63987 (16)0.47611 (10)0.74061 (16)0.0237 (4)
H90.66420.50020.81640.028*
C100.72327 (16)0.46772 (9)0.66991 (16)0.0212 (4)
C110.58475 (15)0.40500 (8)0.52455 (15)0.0174 (3)
C120.55943 (15)0.36274 (8)0.41452 (15)0.0167 (3)
C130.74181 (16)0.29291 (9)0.22063 (16)0.0200 (4)
C140.85598 (15)0.49422 (8)0.72133 (13)0.0259 (4)
C150.29361 (15)0.26235 (8)0.20141 (16)0.0185 (3)
C160.22094 (17)0.28428 (9)0.08735 (16)0.0244 (4)
H160.25100.31870.04470.029*
C170.10426 (18)0.25642 (11)0.03459 (19)0.0320 (5)
H170.05480.2721−0.04330.038*
C180.06033 (18)0.20584 (11)0.09570 (19)0.0324 (5)
H18−0.01950.18690.06020.039*
C190.13328 (19)0.18308 (10)0.20874 (18)0.0308 (4)
H190.10390.14790.25040.037*
C200.24910 (18)0.21126 (9)0.26165 (17)0.0259 (4)
H200.29830.19550.33960.031*
C210.43708 (15)0.45433 (9)0.77745 (15)0.0186 (3)
C220.32389 (16)0.48808 (9)0.73897 (16)0.0218 (4)
H220.29880.50880.65990.026*
C230.24798 (16)0.49136 (10)0.81640 (17)0.0252 (4)
H230.17130.51490.79060.030*
C240.28335 (17)0.46052 (10)0.93113 (17)0.0253 (4)
H240.22960.46160.98250.030*
C250.39631 (18)0.42821 (10)0.97102 (17)0.0252 (4)
H250.42120.40791.05050.030*
C260.47359 (16)0.42539 (9)0.89462 (16)0.0217 (4)
H260.55180.40360.92250.026*
U11U22U33U12U13U23
Cl10.0312 (2)0.0216 (2)0.0385 (3)0.00736 (18)0.0109 (2)0.00183 (19)
Cl20.0198 (2)0.0314 (2)0.0348 (3)−0.00346 (18)0.00969 (19)−0.00712 (19)
Cl30.0298 (2)0.0472 (3)0.0188 (2)0.0067 (2)0.00781 (19)0.0009 (2)
Cl40.027 (2)0.030 (2)0.051 (4)−0.0075 (14)0.000 (2)0.0095 (16)
Cl50.020 (2)0.0270 (18)0.032 (2)0.0059 (11)−0.0049 (14)−0.0020 (12)
Cl60.0212 (9)0.063 (3)0.0263 (9)−0.0124 (12)0.0111 (8)−0.0113 (14)
Cl4'0.0240 (12)0.0194 (11)0.0206 (12)−0.0074 (9)0.0027 (9)−0.0040 (9)
Cl5'0.0176 (11)0.0264 (13)0.071 (3)−0.0007 (9)0.0053 (12)−0.0114 (12)
Cl6'0.0262 (11)0.065 (2)0.0277 (8)−0.0212 (14)0.0167 (8)−0.0187 (10)
N10.0180 (7)0.0173 (7)0.0173 (7)0.0013 (5)0.0048 (6)−0.0003 (6)
N20.0165 (7)0.0230 (7)0.0166 (7)−0.0031 (6)0.0037 (6)−0.0025 (6)
C10.0188 (8)0.0182 (8)0.0181 (9)0.0007 (6)0.0050 (7)0.0005 (7)
C20.0217 (9)0.0206 (8)0.0187 (9)0.0002 (7)0.0043 (7)−0.0026 (7)
C30.0179 (8)0.0157 (8)0.0205 (9)−0.0004 (6)0.0024 (7)0.0008 (7)
C40.0190 (8)0.0157 (8)0.0167 (8)0.0008 (6)0.0034 (7)0.0013 (6)
C50.0158 (8)0.0186 (8)0.0201 (9)−0.0020 (6)0.0029 (7)0.0012 (7)
C60.0174 (8)0.0209 (8)0.0185 (9)0.0005 (6)0.0054 (7)0.0018 (7)
C70.0171 (8)0.0185 (8)0.0171 (9)0.0002 (6)0.0040 (7)0.0013 (6)
C80.0180 (8)0.0204 (8)0.0195 (9)−0.0003 (7)0.0052 (7)0.0003 (7)
C90.0212 (9)0.0317 (10)0.0178 (9)−0.0057 (7)0.0051 (7)−0.0079 (7)
C100.0160 (8)0.0276 (9)0.0193 (9)−0.0058 (7)0.0041 (7)−0.0031 (7)
C110.0172 (8)0.0181 (8)0.0162 (8)−0.0008 (6)0.0037 (6)0.0014 (6)
C120.0179 (8)0.0159 (8)0.0154 (8)0.0007 (6)0.0031 (6)0.0025 (6)
C130.0199 (8)0.0210 (8)0.0177 (9)0.0010 (7)0.0032 (7)−0.0014 (7)
C140.0199 (9)0.0382 (11)0.0210 (10)−0.0082 (8)0.0079 (7)−0.0083 (8)
C150.0175 (8)0.0175 (8)0.0208 (9)−0.0016 (6)0.0059 (7)−0.0049 (7)
C160.0245 (9)0.0252 (9)0.0218 (9)−0.0037 (7)0.0038 (7)−0.0008 (7)
C170.0262 (10)0.0381 (11)0.0262 (11)−0.0041 (8)−0.0017 (8)−0.0020 (8)
C180.0225 (10)0.0388 (12)0.0356 (12)−0.0122 (8)0.0076 (8)−0.0113 (9)
C190.0346 (11)0.0278 (10)0.0339 (11)−0.0129 (8)0.0161 (9)−0.0035 (8)
C200.0284 (10)0.0243 (9)0.0235 (10)−0.0031 (7)0.0048 (8)0.0009 (7)
C210.0185 (8)0.0207 (8)0.0173 (9)−0.0043 (6)0.0063 (7)−0.0039 (7)
C220.0191 (9)0.0255 (9)0.0198 (9)−0.0026 (7)0.0040 (7)0.0006 (7)
C230.0168 (8)0.0292 (10)0.0297 (10)−0.0009 (7)0.0067 (7)−0.0046 (8)
C240.0232 (9)0.0341 (10)0.0223 (10)−0.0089 (8)0.0123 (7)−0.0079 (8)
C250.0302 (10)0.0291 (10)0.0161 (9)−0.0082 (8)0.0063 (7)−0.0007 (7)
C260.0199 (8)0.0230 (9)0.0210 (9)−0.0005 (7)0.0040 (7)0.0002 (7)
Cl1—C131.7890 (18)C8—C211.489 (2)
Cl2—C131.7575 (18)C9—C101.405 (2)
Cl3—C131.7831 (18)C9—H90.9500
Cl4—C141.769 (3)C10—C141.533 (2)
Cl5—C141.791 (3)C11—C121.458 (2)
Cl6—C141.773 (3)C15—C161.385 (2)
Cl4'—C141.784 (2)C15—C201.389 (2)
Cl5'—C141.777 (2)C16—C171.392 (3)
Cl6'—C141.777 (2)C16—H160.9500
N1—C11.313 (2)C17—C181.385 (3)
N1—C121.360 (2)C17—H170.9500
N2—C101.315 (2)C18—C191.382 (3)
N2—C111.356 (2)C18—H180.9500
C1—C21.410 (2)C19—C201.387 (3)
C1—C131.528 (2)C19—H190.9500
C2—C31.375 (2)C20—H200.9500
C2—H20.9500C21—C261.393 (2)
C3—C41.426 (2)C21—C221.394 (2)
C3—C151.498 (2)C22—C231.388 (2)
C4—C121.414 (2)C22—H220.9500
C4—C51.431 (2)C23—C241.385 (3)
C5—C61.356 (2)C23—H230.9500
C5—H50.9500C24—C251.379 (3)
C6—C71.431 (2)C24—H240.9500
C6—H60.9500C25—C261.390 (2)
C7—C111.418 (2)C25—H250.9500
C7—C81.423 (2)C26—H260.9500
C8—C91.371 (2)
C1—N1—C12117.49 (14)Cl4—C14—Cl6113.9 (4)
C10—N2—C11117.37 (14)C10—C14—Cl6'110.97 (16)
N1—C1—C2124.37 (15)C10—C14—Cl5'108.7 (2)
N1—C1—C13116.60 (14)Cl6'—C14—Cl5'114.5 (4)
C2—C1—C13118.83 (15)C10—C14—Cl4'111.2 (2)
C3—C2—C1119.08 (16)Cl6'—C14—Cl4'104.1 (3)
C3—C2—H2120.5Cl5'—C14—Cl4'107.3 (3)
C1—C2—H2120.5C10—C14—Cl5107.2 (3)
C2—C3—C4118.16 (15)Cl4—C14—Cl5106.4 (4)
C2—C3—C15120.78 (15)Cl6—C14—Cl5103.3 (5)
C4—C3—C15121.07 (15)C16—C15—C20118.96 (16)
C12—C4—C3117.91 (15)C16—C15—C3120.62 (15)
C12—C4—C5119.64 (15)C20—C15—C3120.42 (16)
C3—C4—C5122.45 (15)C15—C16—C17120.63 (17)
C6—C5—C4121.15 (15)C15—C16—H16119.7
C6—C5—H5119.4C17—C16—H16119.7
C4—C5—H5119.4C18—C17—C16120.00 (19)
C5—C6—C7121.25 (16)C18—C17—H17120.0
C5—C6—H6119.4C16—C17—H17120.0
C7—C6—H6119.4C19—C18—C17119.60 (18)
C11—C7—C8117.76 (15)C19—C18—H18120.2
C11—C7—C6119.54 (15)C17—C18—H18120.2
C8—C7—C6122.62 (15)C18—C19—C20120.34 (18)
C9—C8—C7118.18 (15)C18—C19—H19119.8
C9—C8—C21119.46 (15)C20—C19—H19119.8
C7—C8—C21122.20 (15)C19—C20—C15120.47 (18)
C8—C9—C10119.34 (16)C19—C20—H20119.8
C8—C9—H9120.3C15—C20—H20119.8
C10—C9—H9120.3C26—C21—C22119.32 (16)
N2—C10—C9124.34 (16)C26—C21—C8118.11 (15)
N2—C10—C14116.68 (14)C22—C21—C8122.55 (15)
C9—C10—C14118.73 (14)C23—C22—C21119.86 (16)
N2—C11—C7122.92 (15)C23—C22—H22120.1
N2—C11—C12117.95 (14)C21—C22—H22120.1
C7—C11—C12119.10 (15)C24—C23—C22120.34 (17)
N1—C12—C4122.85 (15)C24—C23—H23119.8
N1—C12—C11117.83 (14)C22—C23—H23119.8
C4—C12—C11119.25 (15)C25—C24—C23120.19 (16)
C1—C13—Cl2113.35 (12)C25—C24—H24119.9
C1—C13—Cl3111.23 (12)C23—C24—H24119.9
Cl2—C13—Cl3108.45 (9)C24—C25—C26119.82 (17)
C1—C13—Cl1107.85 (12)C24—C25—H25120.1
Cl2—C13—Cl1108.33 (9)C26—C25—H25120.1
Cl3—C13—Cl1107.44 (9)C25—C26—C21120.42 (17)
C10—C14—Cl4113.3 (4)C25—C26—H26119.8
C10—C14—Cl6111.90 (18)C21—C26—H26119.8
C12—N1—C1—C21.9 (2)C2—C1—C13—Cl2170.74 (13)
C12—N1—C1—C13−172.95 (14)N1—C1—C13—Cl3−136.63 (14)
N1—C1—C2—C3−3.0 (3)C2—C1—C13—Cl348.23 (19)
C13—C1—C2—C3171.78 (15)N1—C1—C13—Cl1105.80 (15)
C1—C2—C3—C40.4 (2)C2—C1—C13—Cl1−69.34 (18)
C1—C2—C3—C15−179.20 (15)N2—C10—C14—Cl4140.4 (4)
C2—C3—C4—C122.9 (2)C9—C10—C14—Cl4−45.1 (4)
C15—C3—C4—C12−177.55 (15)N2—C10—C14—Cl69.9 (5)
C2—C3—C4—C5−176.69 (16)C9—C10—C14—Cl6−175.5 (5)
C15—C3—C4—C52.9 (2)N2—C10—C14—Cl6'28.8 (4)
C12—C4—C5—C6−0.7 (2)C9—C10—C14—Cl6'−156.6 (4)
C3—C4—C5—C6178.88 (16)N2—C10—C14—Cl5'−98.0 (3)
C4—C5—C6—C71.3 (3)C9—C10—C14—Cl5'76.6 (4)
C5—C6—C7—C110.3 (2)N2—C10—C14—Cl4'144.1 (3)
C5—C6—C7—C8−176.41 (16)C9—C10—C14—Cl4'−41.3 (3)
C11—C7—C8—C91.7 (2)N2—C10—C14—Cl5−102.6 (4)
C6—C7—C8—C9178.40 (17)C9—C10—C14—Cl571.9 (4)
C11—C7—C8—C21−173.61 (15)C2—C3—C15—C16−68.2 (2)
C6—C7—C8—C213.1 (3)C4—C3—C15—C16112.29 (19)
C7—C8—C9—C100.9 (3)C2—C3—C15—C20111.8 (2)
C21—C8—C9—C10176.27 (17)C4—C3—C15—C20−67.8 (2)
C11—N2—C10—C90.5 (3)C20—C15—C16—C171.0 (3)
C11—N2—C10—C14174.73 (14)C3—C15—C16—C17−179.04 (17)
C8—C9—C10—N2−2.1 (3)C15—C16—C17—C18−0.6 (3)
C8—C9—C10—C14−176.22 (16)C16—C17—C18—C19−0.4 (3)
C10—N2—C11—C72.3 (2)C17—C18—C19—C200.9 (3)
C10—N2—C11—C12−175.49 (15)C18—C19—C20—C15−0.4 (3)
C8—C7—C11—N2−3.4 (2)C16—C15—C20—C19−0.5 (3)
C6—C7—C11—N2179.78 (15)C3—C15—C20—C19179.56 (17)
C8—C7—C11—C12174.39 (15)C9—C8—C21—C26−59.3 (2)
C6—C7—C11—C12−2.5 (2)C7—C8—C21—C26115.88 (19)
C1—N1—C12—C41.7 (2)C9—C8—C21—C22119.2 (2)
C1—N1—C12—C11178.76 (15)C7—C8—C21—C22−65.6 (2)
C3—C4—C12—N1−4.1 (2)C26—C21—C22—C23−1.3 (3)
C5—C4—C12—N1175.48 (15)C8—C21—C22—C23−179.75 (16)
C3—C4—C12—C11178.89 (15)C21—C22—C23—C24−0.8 (3)
C5—C4—C12—C11−1.5 (2)C22—C23—C24—C252.2 (3)
N2—C11—C12—N13.8 (2)C23—C24—C25—C26−1.4 (3)
C7—C11—C12—N1−174.08 (15)C24—C25—C26—C21−0.7 (3)
N2—C11—C12—C4−179.07 (15)C22—C21—C26—C252.0 (3)
C7—C11—C12—C43.1 (2)C8—C21—C26—C25−179.40 (16)
N1—C1—C13—Cl2−14.1 (2)
  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Digoxin immunoassay with monoclonal and polyclonal antibodies using time-resolved fluorometry.

Authors:  A Papanastasiou-Diamandi; K Conway; E P Diamandis
Journal:  J Pharm Sci       Date:  1989-08       Impact factor: 3.534

3.  Polyvinylamine-streptavidin complexes labeled with a europium chelator: a universal detection reagent for solid-phase time resolved fluorometric applications.

Authors:  A Scorilas; E P Diamandis
Journal:  Clin Biochem       Date:  2000-07       Impact factor: 3.281

4.  A new europium chelate for protein labelling and time-resolved fluorometric applications.

Authors:  R A Evangelista; A Pollak; B Allore; E F Templeton; R C Morton; E P Diamandis
Journal:  Clin Biochem       Date:  1988-06       Impact factor: 3.281

  4 in total

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