| Literature DB >> 21580076 |
Edward R T Tiekink, James L Wardell, Solange M S V Wardell.
Abstract
The 30 non-H atoms in title dihydrazine compound, C(20)H(16)N(6)O(4)·2H(2)O, are close to coplanar, the r.m.s. deviation for these atoms being 0.096 Å. The conformation about each of the C=N bonds is E, and the mol-ecule has non-crystallographic 2/m symmetry. The presence of O-H⋯O and N-H⋯O hydrogen bonding leads to a three-dimensional network in the crystal structure. A highly disordered solvent mol-ecule is present within a mol-ecular cavity defined by the organic and water mol-ecules. Its contribution to the electron density was removed from the observed data in the final cycles of refinement and the formula, molecular weight and density are given without taking into account the contribution of the solvent molecule.Entities:
Year: 2009 PMID: 21580076 PMCID: PMC2980149 DOI: 10.1107/S1600536809053963
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C20H16N6O4·2H2O | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 4364 reflections | |
| θ = 2.9–27.5° | |
| µ = 0.11 mm−1 | |
| α = 100.749 (3)° | |
| β = 90.533 (4)° | Block, dark-red |
| γ = 103.131 (5)° | 0.38 × 0.22 × 0.07 mm |
| Nonius KappaCCD area-detector diffractometer | 3688 independent reflections |
| Radiation source: Enraf–Nonius FR591 rotating anode | 2638 reflections with |
| 10 cm confocal mirrors | |
| Detector resolution: 9.091 pixels mm-1 | θmax = 25.0°, θmin = 3.0° |
| φ and ω scans | |
| Absorption correction: multi-scan ( | |
| 16566 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3688 reflections | (Δ/σ)max < 0.001 |
| 301 parameters | Δρmax = 0.45 e Å−3 |
| 6 restraints | Δρmin = −0.30 e Å−3 |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | −0.2175 (2) | −0.6067 (2) | 1.41897 (13) | 0.0387 (5) | |
| O2 | −0.3174 (3) | −0.6708 (2) | 1.28198 (14) | 0.0421 (5) | |
| O3 | 1.1204 (2) | 0.9370 (2) | 0.69699 (13) | 0.0388 (5) | |
| O4 | 0.9881 (2) | 0.8999 (2) | 0.56744 (12) | 0.0340 (5) | |
| N1 | −0.2205 (3) | −0.5823 (2) | 1.34244 (16) | 0.0314 (5) | |
| N2 | 0.2344 (3) | −0.0749 (2) | 1.26201 (14) | 0.0285 (5) | |
| H2N | 0.3112 | −0.0149 | 1.3030 | 0.034* | |
| N3 | 0.2300 (3) | −0.0459 (2) | 1.17772 (14) | 0.0279 (5) | |
| N4 | 0.5188 (3) | 0.3449 (2) | 0.80714 (13) | 0.0268 (5) | |
| N5 | 0.5234 (3) | 0.3707 (2) | 0.72248 (13) | 0.0272 (5) | |
| H5N | 0.4508 | 0.3089 | 0.6803 | 0.033* | |
| N6 | 1.0012 (3) | 0.8658 (2) | 0.64104 (14) | 0.0281 (5) | |
| C1 | −0.1068 (3) | −0.4476 (3) | 1.32299 (17) | 0.0264 (6) | |
| C2 | 0.0140 (3) | −0.3527 (3) | 1.38838 (18) | 0.0298 (6) | |
| H2 | 0.0190 | −0.3740 | 1.4464 | 0.036* | |
| C3 | 0.1262 (3) | −0.2277 (3) | 1.36776 (17) | 0.0275 (6) | |
| H3 | 0.2084 | −0.1618 | 1.4119 | 0.033* | |
| C4 | 0.1193 (3) | −0.1974 (3) | 1.28162 (16) | 0.0250 (6) | |
| C5 | −0.0061 (3) | −0.2935 (3) | 1.21764 (18) | 0.0312 (6) | |
| H5 | −0.0141 | −0.2721 | 1.1597 | 0.037* | |
| C6 | −0.1168 (4) | −0.4174 (3) | 1.23830 (19) | 0.0330 (6) | |
| H6 | −0.2005 | −0.4829 | 1.1946 | 0.040* | |
| C7 | 0.3492 (3) | 0.0666 (3) | 1.16298 (17) | 0.0285 (6) | |
| H7 | 0.4329 | 0.1230 | 1.2094 | 0.034* | |
| C8 | 0.3571 (3) | 0.1086 (3) | 1.07560 (17) | 0.0270 (6) | |
| C9 | 0.4848 (4) | 0.2336 (3) | 1.06298 (18) | 0.0371 (7) | |
| H9 | 0.5628 | 0.2913 | 1.1114 | 0.044* | |
| C10 | 0.4993 (4) | 0.2748 (3) | 0.98095 (18) | 0.0365 (7) | |
| H10 | 0.5857 | 0.3617 | 0.9740 | 0.044* | |
| C11 | 0.3902 (3) | 0.1917 (3) | 0.90894 (17) | 0.0267 (6) | |
| C12 | 0.2590 (4) | 0.0692 (3) | 0.92239 (19) | 0.0399 (7) | |
| H12 | 0.1792 | 0.0129 | 0.8743 | 0.048* | |
| C13 | 0.2436 (4) | 0.0288 (3) | 1.00415 (19) | 0.0400 (7) | |
| H13 | 0.1535 | −0.0554 | 1.0117 | 0.048* | |
| C14 | 0.4076 (3) | 0.2275 (3) | 0.82018 (17) | 0.0274 (6) | |
| H14 | 0.3356 | 0.1628 | 0.7716 | 0.033* | |
| C15 | 0.6399 (3) | 0.4935 (3) | 0.70347 (16) | 0.0246 (6) | |
| C16 | 0.7616 (3) | 0.5904 (3) | 0.76914 (16) | 0.0259 (6) | |
| H16 | 0.7625 | 0.5721 | 0.8280 | 0.031* | |
| C17 | 0.8788 (3) | 0.7112 (3) | 0.74798 (17) | 0.0267 (6) | |
| H17 | 0.9626 | 0.7757 | 0.7920 | 0.032* | |
| C18 | 0.8752 (3) | 0.7394 (3) | 0.66236 (17) | 0.0251 (6) | |
| C19 | 0.7543 (3) | 0.6461 (3) | 0.59689 (17) | 0.0275 (6) | |
| H19 | 0.7515 | 0.6670 | 0.5387 | 0.033* | |
| C20 | 0.6385 (3) | 0.5231 (3) | 0.61741 (17) | 0.0274 (6) | |
| H20 | 0.5569 | 0.4577 | 0.5727 | 0.033* | |
| O1W | 0.3412 (2) | 0.1327 (2) | 0.56735 (12) | 0.0346 (5) | |
| H1W | 0.2326 (16) | 0.095 (3) | 0.565 (2) | 0.052* | |
| H2W | 0.386 (4) | 0.141 (4) | 0.5191 (12) | 0.052* | |
| O2W | 0.4975 (2) | 0.9015 (2) | 0.59601 (13) | 0.0349 (5) | |
| H3W | 0.434 (3) | 0.961 (3) | 0.590 (2) | 0.052* | |
| H4W | 0.429 (3) | 0.826 (2) | 0.609 (2) | 0.052* |
| O1 | 0.0431 (11) | 0.0390 (12) | 0.0363 (12) | 0.0049 (9) | 0.0133 (9) | 0.0185 (9) |
| O2 | 0.0404 (11) | 0.0315 (11) | 0.0495 (13) | −0.0048 (9) | −0.0040 (10) | 0.0116 (10) |
| O3 | 0.0373 (11) | 0.0373 (11) | 0.0372 (12) | −0.0057 (9) | −0.0012 (9) | 0.0132 (9) |
| O4 | 0.0418 (11) | 0.0321 (11) | 0.0311 (11) | 0.0050 (8) | 0.0072 (8) | 0.0175 (8) |
| N1 | 0.0298 (12) | 0.0267 (12) | 0.0424 (15) | 0.0093 (10) | 0.0104 (10) | 0.0146 (11) |
| N2 | 0.0320 (12) | 0.0277 (12) | 0.0272 (12) | 0.0028 (9) | 0.0048 (9) | 0.0136 (9) |
| N3 | 0.0344 (12) | 0.0279 (12) | 0.0247 (12) | 0.0085 (10) | 0.0076 (9) | 0.0115 (9) |
| N4 | 0.0301 (12) | 0.0279 (12) | 0.0259 (12) | 0.0073 (9) | 0.0064 (9) | 0.0129 (9) |
| N5 | 0.0301 (12) | 0.0277 (12) | 0.0227 (12) | 0.0000 (9) | 0.0038 (9) | 0.0106 (9) |
| N6 | 0.0319 (12) | 0.0258 (12) | 0.0296 (13) | 0.0075 (10) | 0.0078 (10) | 0.0115 (10) |
| C1 | 0.0244 (13) | 0.0230 (13) | 0.0345 (15) | 0.0062 (11) | 0.0077 (11) | 0.0110 (11) |
| C2 | 0.0325 (14) | 0.0327 (15) | 0.0309 (15) | 0.0132 (12) | 0.0116 (11) | 0.0155 (12) |
| C3 | 0.0282 (14) | 0.0284 (14) | 0.0279 (14) | 0.0059 (11) | 0.0065 (11) | 0.0108 (11) |
| C4 | 0.0262 (13) | 0.0246 (13) | 0.0278 (14) | 0.0089 (10) | 0.0078 (10) | 0.0095 (11) |
| C5 | 0.0352 (15) | 0.0308 (15) | 0.0302 (15) | 0.0045 (12) | 0.0016 (12) | 0.0161 (12) |
| C6 | 0.0336 (15) | 0.0291 (15) | 0.0368 (16) | 0.0054 (12) | −0.0007 (12) | 0.0102 (12) |
| C7 | 0.0289 (14) | 0.0270 (14) | 0.0300 (15) | 0.0029 (11) | 0.0040 (11) | 0.0111 (11) |
| C8 | 0.0278 (14) | 0.0264 (14) | 0.0296 (14) | 0.0070 (11) | 0.0068 (11) | 0.0115 (11) |
| C9 | 0.0369 (15) | 0.0376 (16) | 0.0303 (16) | −0.0083 (12) | −0.0002 (12) | 0.0116 (12) |
| C10 | 0.0377 (16) | 0.0336 (15) | 0.0336 (16) | −0.0077 (12) | 0.0036 (12) | 0.0146 (13) |
| C11 | 0.0275 (13) | 0.0264 (14) | 0.0299 (15) | 0.0074 (11) | 0.0068 (11) | 0.0132 (11) |
| C12 | 0.0414 (16) | 0.0389 (17) | 0.0334 (16) | −0.0101 (13) | −0.0032 (12) | 0.0157 (13) |
| C13 | 0.0405 (16) | 0.0368 (16) | 0.0383 (17) | −0.0111 (13) | 0.0025 (13) | 0.0206 (13) |
| C14 | 0.0300 (14) | 0.0240 (14) | 0.0284 (14) | 0.0030 (11) | 0.0031 (11) | 0.0095 (11) |
| C15 | 0.0257 (13) | 0.0219 (13) | 0.0287 (14) | 0.0074 (10) | 0.0074 (10) | 0.0088 (11) |
| C16 | 0.0298 (14) | 0.0286 (14) | 0.0220 (13) | 0.0084 (11) | 0.0061 (10) | 0.0097 (11) |
| C17 | 0.0283 (14) | 0.0256 (14) | 0.0264 (14) | 0.0049 (11) | 0.0033 (10) | 0.0073 (11) |
| C18 | 0.0248 (13) | 0.0227 (13) | 0.0312 (15) | 0.0066 (10) | 0.0080 (11) | 0.0121 (11) |
| C19 | 0.0327 (14) | 0.0280 (14) | 0.0259 (14) | 0.0085 (11) | 0.0073 (11) | 0.0131 (11) |
| C20 | 0.0295 (14) | 0.0263 (14) | 0.0264 (14) | 0.0035 (11) | 0.0028 (11) | 0.0090 (11) |
| O1W | 0.0327 (11) | 0.0375 (11) | 0.0319 (11) | 0.0007 (9) | 0.0043 (8) | 0.0118 (9) |
| O2W | 0.0358 (11) | 0.0304 (11) | 0.0409 (12) | 0.0022 (8) | 0.0049 (9) | 0.0192 (9) |
| O1—N1 | 1.238 (3) | C8—C13 | 1.382 (4) |
| O2—N1 | 1.235 (3) | C8—C9 | 1.393 (4) |
| O3—N6 | 1.235 (3) | C9—C10 | 1.381 (4) |
| O4—N6 | 1.237 (3) | C9—H9 | 0.9500 |
| N1—C1 | 1.444 (3) | C10—C11 | 1.379 (4) |
| N2—C4 | 1.364 (3) | C10—H10 | 0.9500 |
| N2—N3 | 1.371 (3) | C11—C12 | 1.395 (4) |
| N2—H2N | 0.8796 | C11—C14 | 1.461 (3) |
| N3—C7 | 1.288 (3) | C12—C13 | 1.374 (4) |
| N4—C14 | 1.280 (3) | C12—H12 | 0.9500 |
| N4—N5 | 1.364 (3) | C13—H13 | 0.9500 |
| N5—C15 | 1.368 (3) | C14—H14 | 0.9500 |
| N5—H5N | 0.8799 | C15—C20 | 1.398 (3) |
| N6—C18 | 1.442 (3) | C15—C16 | 1.406 (4) |
| C1—C6 | 1.384 (4) | C16—C17 | 1.370 (3) |
| C1—C2 | 1.393 (4) | C16—H16 | 0.9500 |
| C2—C3 | 1.377 (3) | C17—C18 | 1.388 (3) |
| C2—H2 | 0.9500 | C17—H17 | 0.9500 |
| C3—C4 | 1.405 (3) | C18—C19 | 1.389 (4) |
| C3—H3 | 0.9500 | C19—C20 | 1.376 (3) |
| C4—C5 | 1.404 (4) | C19—H19 | 0.9500 |
| C5—C6 | 1.365 (4) | C20—H20 | 0.9500 |
| C5—H5 | 0.9500 | O1W—H1W | 0.833 (10) |
| C6—H6 | 0.9500 | O1W—H2W | 0.831 (10) |
| C7—C8 | 1.463 (3) | O2W—H3W | 0.839 (10) |
| C7—H7 | 0.9500 | O2W—H4W | 0.836 (10) |
| O2—N1—O1 | 121.7 (2) | C10—C9—C8 | 120.9 (3) |
| O2—N1—C1 | 119.1 (2) | C10—C9—H9 | 119.6 |
| O1—N1—C1 | 119.3 (2) | C8—C9—H9 | 119.6 |
| C4—N2—N3 | 119.5 (2) | C9—C10—C11 | 120.9 (2) |
| C4—N2—H2N | 120.4 | C9—C10—H10 | 119.5 |
| N3—N2—H2N | 120.1 | C11—C10—H10 | 119.5 |
| C7—N3—N2 | 115.9 (2) | C10—C11—C12 | 118.1 (2) |
| C14—N4—N5 | 116.7 (2) | C10—C11—C14 | 122.4 (2) |
| N4—N5—C15 | 119.9 (2) | C12—C11—C14 | 119.5 (2) |
| N4—N5—H5N | 119.9 | C13—C12—C11 | 121.0 (3) |
| C15—N5—H5N | 120.2 | C13—C12—H12 | 119.5 |
| O3—N6—O4 | 121.8 (2) | C11—C12—H12 | 119.5 |
| O3—N6—C18 | 118.8 (2) | C12—C13—C8 | 121.0 (2) |
| O4—N6—C18 | 119.5 (2) | C12—C13—H13 | 119.5 |
| C6—C1—C2 | 121.1 (2) | C8—C13—H13 | 119.5 |
| C6—C1—N1 | 119.0 (2) | N4—C14—C11 | 120.8 (2) |
| C2—C1—N1 | 119.9 (2) | N4—C14—H14 | 119.6 |
| C3—C2—C1 | 119.2 (2) | C11—C14—H14 | 119.6 |
| C3—C2—H2 | 120.4 | N5—C15—C20 | 119.6 (2) |
| C1—C2—H2 | 120.4 | N5—C15—C16 | 121.0 (2) |
| C2—C3—C4 | 120.2 (2) | C20—C15—C16 | 119.4 (2) |
| C2—C3—H3 | 119.9 | C17—C16—C15 | 119.8 (2) |
| C4—C3—H3 | 119.9 | C17—C16—H16 | 120.1 |
| N2—C4—C3 | 119.3 (2) | C15—C16—H16 | 120.1 |
| N2—C4—C5 | 121.4 (2) | C16—C17—C18 | 120.1 (2) |
| C3—C4—C5 | 119.3 (2) | C16—C17—H17 | 120.0 |
| C6—C5—C4 | 120.3 (2) | C18—C17—H17 | 120.0 |
| C6—C5—H5 | 119.9 | C17—C18—C19 | 120.9 (2) |
| C4—C5—H5 | 119.9 | C17—C18—N6 | 119.3 (2) |
| C5—C6—C1 | 119.9 (3) | C19—C18—N6 | 119.8 (2) |
| C5—C6—H6 | 120.0 | C20—C19—C18 | 119.2 (2) |
| C1—C6—H6 | 120.0 | C20—C19—H19 | 120.4 |
| N3—C7—C8 | 120.8 (2) | C18—C19—H19 | 120.4 |
| N3—C7—H7 | 119.6 | C19—C20—C15 | 120.6 (2) |
| C8—C7—H7 | 119.6 | C19—C20—H20 | 119.7 |
| C13—C8—C9 | 118.1 (2) | C15—C20—H20 | 119.7 |
| C13—C8—C7 | 122.8 (2) | H1W—O1W—H2W | 117 (3) |
| C9—C8—C7 | 119.1 (2) | H3W—O2W—H4W | 106 (3) |
| C4—N2—N3—C7 | −176.2 (2) | C9—C10—C11—C14 | −176.8 (2) |
| C14—N4—N5—C15 | −179.5 (2) | C10—C11—C12—C13 | −2.6 (4) |
| O2—N1—C1—C6 | 3.6 (3) | C14—C11—C12—C13 | 177.3 (3) |
| O1—N1—C1—C6 | −177.0 (2) | C11—C12—C13—C8 | 0.3 (5) |
| O2—N1—C1—C2 | −174.6 (2) | C9—C8—C13—C12 | 1.6 (4) |
| O1—N1—C1—C2 | 4.8 (3) | C7—C8—C13—C12 | −177.9 (3) |
| C6—C1—C2—C3 | −0.6 (4) | N5—N4—C14—C11 | −178.8 (2) |
| N1—C1—C2—C3 | 177.6 (2) | C10—C11—C14—N4 | −4.7 (4) |
| C1—C2—C3—C4 | −0.5 (4) | C12—C11—C14—N4 | 175.3 (2) |
| N3—N2—C4—C3 | 179.1 (2) | N4—N5—C15—C20 | −177.1 (2) |
| N3—N2—C4—C5 | −1.1 (3) | N4—N5—C15—C16 | 3.0 (3) |
| C2—C3—C4—N2 | −178.5 (2) | N5—C15—C16—C17 | 178.9 (2) |
| C2—C3—C4—C5 | 1.7 (4) | C20—C15—C16—C17 | −0.9 (4) |
| N2—C4—C5—C6 | 178.3 (2) | C15—C16—C17—C18 | 1.2 (4) |
| C3—C4—C5—C6 | −1.9 (4) | C16—C17—C18—C19 | −0.3 (4) |
| C4—C5—C6—C1 | 0.8 (4) | C16—C17—C18—N6 | −179.1 (2) |
| C2—C1—C6—C5 | 0.5 (4) | O3—N6—C18—C17 | 7.1 (3) |
| N1—C1—C6—C5 | −177.7 (2) | O4—N6—C18—C17 | −173.2 (2) |
| N2—N3—C7—C8 | −179.8 (2) | O3—N6—C18—C19 | −171.7 (2) |
| N3—C7—C8—C13 | −2.3 (4) | O4—N6—C18—C19 | 7.9 (3) |
| N3—C7—C8—C9 | 178.2 (2) | C17—C18—C19—C20 | −0.9 (4) |
| C13—C8—C9—C10 | −1.1 (4) | N6—C18—C19—C20 | 177.9 (2) |
| C7—C8—C9—C10 | 178.4 (2) | C18—C19—C20—C15 | 1.2 (4) |
| C8—C9—C10—C11 | −1.3 (4) | N5—C15—C20—C19 | 179.9 (2) |
| C9—C10—C11—C12 | 3.1 (4) | C16—C15—C20—C19 | −0.3 (4) |
| H··· | ||||
| O1W—H1w···O4i | 0.833 (17) | 2.32 (2) | 3.084 (2) | 153 (2) |
| O1W—H2w···O2wii | 0.83 (2) | 2.01 (2) | 2.808 (3) | 163 (3) |
| N5—H5n···O1w | 0.88 | 2.17 | 3.021 (3) | 163 |
| O2W—H3w···O1wiii | 0.84 (3) | 1.98 (3) | 2.800 (3) | 165 (3) |
| O2W—H4w···O1iv | 0.84 (2) | 2.28 (2) | 3.061 (3) | 156 (3) |
| O2W—H4w···O2iv | 0.84 (2) | 2.45 (2) | 3.204 (3) | 150 (3) |
| N2—H2n···O2wv | 0.88 | 2.09 | 2.959 (3) | 172 |
| C7—H7···O2vi | 0.95 | 2.48 | 3.374 (3) | 157 |
| C14—H14···O3i | 0.95 | 2.45 | 3.338 (3) | 156 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1 | 0.83 (2) | 2.32 (2) | 3.084 (2) | 153 (2) |
| O1 | 0.83 (2) | 2.01 (2) | 2.808 (3) | 163 (3) |
| N5—H5n⋯O1w | 0.88 | 2.17 | 3.021 (3) | 163 |
| O2 | 0.84 (3) | 1.98 (3) | 2.800 (3) | 165 (3) |
| O2 | 0.84 (2) | 2.28 (2) | 3.061 (3) | 156 (3) |
| O2 | 0.84 (2) | 2.45 (2) | 3.204 (3) | 150 (3) |
| N2—H2n⋯O2wv | 0.88 | 2.09 | 2.959 (3) | 172 |
| C7—H7⋯O2vi | 0.95 | 2.48 | 3.374 (3) | 157 |
| C14—H14⋯O3i | 0.95 | 2.45 | 3.338 (3) | 156 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .