Literature DB >> 21580049

3-(3-Bromo-benz-yl)isoquinolin-1(2H)-one.

Farukh Iftakhar Ali, Tariq Mahmood Babar, Nasim Hasan Rama, Peter G Jones.   

Abstract

In the title compound, C(16)H(12)BrNO, the ring systems subtend an inter-planar dihedral angle of 75.95 (3)°. In the crystal packing, mol-ecules are linked to form centrosymmetric pairs by pairs of classical N-H⋯O hydrogen bonds.

Entities:  

Year:  2009        PMID: 21580049      PMCID: PMC2980169          DOI: 10.1107/S1600536809051137

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological and pharmaceutical properties of isoquinolin-1(2H)-one derivatives, see: Chern & Li (2004 ▶); Coelho et al. (2003 ▶); Jayaraman et al. (2000 ▶); Thompson & Kallmerten (1990 ▶); Ukita et al. (2001 ▶). For the structure of a related isochromene derivative, see: Ali et al. (2009 ▶).

Experimental

Crystal data

C16H12BrNO M = 314.18 Triclinic, a = 4.5858 (4) Å b = 9.4976 (7) Å c = 14.8296 (11) Å α = 88.698 (6)° β = 83.829 (6)° γ = 86.529 (6)° V = 640.88 (9) Å3 Z = 2 Cu Kα radiation μ = 4.28 mm−1 T = 100 K 0.16 × 0.07 × 0.07 mm

Data collection

Oxford Diffraction Nova A diffractometer Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2009 ▶) T min = 0.817, T max = 1.000 9267 measured reflections 2642 independent reflections 2586 reflections with I > 2σ(I) R int = 0.021

Refinement

R[F 2 > 2σ(F 2)] = 0.026 wR(F 2) = 0.068 S = 0.90 2642 reflections 176 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.54 e Å−3 Δρmin = −0.65 e Å−3 Data collection: CrysAlis CCD (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlis RED (Oxford Diffraction, 2009 ▶); data reduction: CrysAlis RED; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP (Siemens, 1994 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809051137/rz2396sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809051137/rz2396Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H12BrNOZ = 2
Mr = 314.18F(000) = 316
Triclinic, P1Dx = 1.628 Mg m3
Hall symbol: -P 1Cu Kα radiation, λ = 1.54184 Å
a = 4.5858 (4) ÅCell parameters from 9315 reflections
b = 9.4976 (7) Åθ = 3.0–75.6°
c = 14.8296 (11) ŵ = 4.28 mm1
α = 88.698 (6)°T = 100 K
β = 83.829 (6)°Prism, colourless
γ = 86.529 (6)°0.16 × 0.07 × 0.07 mm
V = 640.88 (9) Å3
Oxford Diffraction Nova A diffractometer2642 independent reflections
Radiation source: Nova (Cu) X-ray Source2586 reflections with I > 2σ(I)
mirrorRint = 0.021
Detector resolution: 10.3543 pixels mm-1θmax = 75.8°, θmin = 3.0°
ω scanh = −5→5
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2009)k = −11→11
Tmin = 0.817, Tmax = 1.000l = −18→18
9267 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.026Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.068H atoms treated by a mixture of independent and constrained refinement
S = 0.90w = 1/[σ2(Fo2) + (0.0429P)2 + 0.8338P] where P = (Fo2 + 2Fc2)/3
2642 reflections(Δ/σ)max = 0.016
176 parametersΔρmax = 0.54 e Å3
0 restraintsΔρmin = −0.65 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.Least-squares planes (x,y,z in crystal coordinates) and deviations from them (* indicates atom used to define plane)- 3.3521 (0.0017) x + 6.0480 (0.0040) y - 1.1834 (0.0042) z = 2.8164 (0.0038)* 0.0154 (0.0011) C10 * -0.0101 (0.0014) C11 * -0.0109 (0.0014) C12 * -0.0098 (0.0015) C13 * 0.0036 (0.0015) C14 * 0.0074 (0.0013) C15 * -0.0053 (0.0014) C16 * 0.0097 (0.0008) BrRms deviation of fitted atoms = 0.00963.3793 (0.0010) x + 4.6226 (0.0023) y + 8.8098 (0.0043) z = 6.7949 (0.0012)Angle to previous plane (with approximate e.s.d.) = 75.95 (0.03)* 0.0161 (0.0013) C10 * -0.0154 (0.0013) N * 0.0007 (0.0011) O * -0.0018 (0.0014) C1 * -0.0080 (0.0015) C2 * -0.0054 (0.0015) C3 * 0.0009 (0.0015) C4 * -0.0003 (0.0014) C5 * -0.0016 (0.0014) C6 * -0.0046 (0.0015) C7 * 0.0104 (0.0015) C8 * 0.0089 (0.0015) C9Rms deviation of fitted atoms = 0.0082
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br0.41731 (5)0.68583 (2)−0.065128 (12)0.03136 (9)
N0.2730 (3)0.49455 (15)0.40535 (10)0.0155 (3)
H010.131 (5)0.545 (3)0.4306 (17)0.025 (6)*
O0.2033 (3)0.33201 (12)0.51915 (8)0.0187 (2)
C10.3423 (4)0.36850 (17)0.44644 (11)0.0159 (3)
C20.4140 (4)0.54534 (17)0.32544 (11)0.0155 (3)
C30.6381 (4)0.46744 (18)0.28064 (11)0.0168 (3)
H30.73470.50180.22530.020*
C40.7296 (4)0.33229 (17)0.31716 (11)0.0162 (3)
C50.9617 (4)0.24635 (19)0.27310 (12)0.0194 (3)
H51.06300.27780.21780.023*
C61.0421 (4)0.11699 (19)0.30999 (12)0.0216 (4)
H61.19880.06030.27980.026*
C70.8955 (4)0.06803 (18)0.39159 (12)0.0216 (4)
H70.9509−0.02170.41600.026*
C80.6701 (4)0.15123 (18)0.43607 (12)0.0190 (3)
H80.57210.11920.49180.023*
C90.5853 (4)0.28290 (17)0.39932 (11)0.0159 (3)
C100.2940 (4)0.68958 (18)0.29851 (12)0.0194 (3)
H10A0.31690.75600.34740.023*
H10B0.08110.68530.29370.023*
C110.4378 (4)0.74776 (17)0.21028 (12)0.0170 (3)
C120.3752 (4)0.69677 (18)0.12761 (12)0.0201 (3)
H120.24380.62350.12610.024*
C130.5061 (4)0.75386 (19)0.04767 (12)0.0211 (3)
C140.6969 (4)0.8617 (2)0.04693 (13)0.0237 (4)
H140.78360.9000−0.00860.028*
C150.7580 (4)0.91238 (19)0.12966 (14)0.0247 (4)
H150.88780.98640.13090.030*
C160.6308 (4)0.85559 (18)0.21038 (12)0.0195 (3)
H160.67580.89060.26650.023*
U11U22U33U12U13U23
Br0.04174 (14)0.03719 (14)0.01477 (12)0.00054 (9)−0.00234 (8)−0.00284 (8)
N0.0173 (7)0.0153 (6)0.0130 (6)0.0004 (5)0.0017 (5)−0.0002 (5)
O0.0218 (6)0.0182 (6)0.0152 (6)−0.0004 (4)0.0016 (5)0.0024 (4)
C10.0177 (8)0.0156 (7)0.0148 (8)−0.0021 (6)−0.0031 (6)−0.0007 (6)
C20.0184 (8)0.0156 (7)0.0130 (7)−0.0029 (6)−0.0020 (6)−0.0008 (6)
C30.0186 (8)0.0182 (8)0.0134 (8)−0.0027 (6)−0.0002 (6)0.0001 (6)
C40.0166 (7)0.0173 (8)0.0152 (8)−0.0021 (6)−0.0031 (6)−0.0027 (6)
C50.0186 (8)0.0226 (8)0.0168 (8)−0.0003 (6)−0.0013 (6)−0.0030 (6)
C60.0211 (8)0.0228 (8)0.0212 (9)0.0041 (7)−0.0050 (7)−0.0066 (7)
C70.0270 (9)0.0175 (8)0.0211 (9)0.0031 (7)−0.0083 (7)−0.0022 (6)
C80.0231 (8)0.0175 (8)0.0170 (8)−0.0015 (6)−0.0042 (6)−0.0003 (6)
C90.0172 (8)0.0158 (7)0.0151 (8)−0.0013 (6)−0.0036 (6)−0.0014 (6)
C100.0243 (8)0.0172 (8)0.0156 (8)0.0019 (6)0.0015 (7)0.0007 (6)
C110.0193 (8)0.0136 (7)0.0166 (8)0.0037 (6)0.0013 (6)0.0014 (6)
C120.0229 (8)0.0175 (8)0.0193 (8)−0.0007 (6)−0.0004 (7)0.0001 (6)
C130.0250 (9)0.0220 (8)0.0151 (8)0.0051 (7)−0.0005 (7)−0.0001 (6)
C140.0246 (9)0.0243 (9)0.0202 (9)0.0016 (7)0.0045 (7)0.0073 (7)
C150.0250 (9)0.0205 (8)0.0280 (10)−0.0043 (7)0.0009 (7)0.0044 (7)
C160.0213 (8)0.0179 (8)0.0189 (8)0.0012 (6)−0.0016 (6)−0.0003 (6)
Br—C131.8997 (18)C12—C131.384 (2)
N—C11.367 (2)C13—C141.386 (3)
N—C21.379 (2)C14—C151.390 (3)
O—C11.245 (2)C15—C161.387 (3)
C1—C91.463 (2)N—H010.85 (3)
C2—C31.352 (2)C3—H30.9500
C2—C101.507 (2)C5—H50.9500
C3—C41.438 (2)C6—H60.9500
C4—C91.407 (2)C7—H70.9500
C4—C51.413 (2)C8—H80.9500
C5—C61.379 (3)C10—H10A0.9900
C6—C71.404 (3)C10—H10B0.9900
C7—C81.380 (3)C12—H120.9500
C8—C91.403 (2)C14—H140.9500
C10—C111.509 (2)C15—H150.9500
C11—C161.394 (2)C16—H160.9500
C11—C121.393 (2)
C1—N—C2125.36 (14)C14—C15—C16120.44 (17)
O—C1—N120.74 (15)C15—C16—C11120.83 (17)
O—C1—C9123.72 (15)C1—N—H01117.5 (16)
N—C1—C9115.54 (15)C2—N—H01117.1 (16)
C3—C2—N119.97 (15)C2—C3—H3120.2
C3—C2—C10126.87 (15)C4—C3—H3120.2
N—C2—C10113.15 (14)C6—C5—H5119.8
C2—C3—C4119.66 (15)C4—C5—H5119.8
C9—C4—C5118.38 (15)C5—C6—H6119.6
C9—C4—C3119.57 (15)C7—C6—H6119.6
C5—C4—C3122.06 (15)C8—C7—H7120.2
C6—C5—C4120.36 (16)C6—C7—H7120.2
C5—C6—C7120.90 (16)C7—C8—H8119.9
C8—C7—C6119.53 (16)C9—C8—H8119.9
C7—C8—C9120.25 (17)C2—C10—H10A108.5
C8—C9—C4120.57 (16)C11—C10—H10A108.5
C8—C9—C1119.53 (15)C2—C10—H10B108.5
C4—C9—C1119.89 (15)C11—C10—H10B108.5
C2—C10—C11114.88 (14)H10A—C10—H10B107.5
C16—C11—C12119.00 (16)C13—C12—H12120.3
C16—C11—C10120.36 (16)C11—C12—H12120.3
C12—C11—C10120.63 (15)C13—C14—H14120.9
C13—C12—C11119.41 (16)C15—C14—H14120.9
C12—C13—C14122.10 (17)C16—C15—H15119.8
C12—C13—Br119.42 (14)C14—C15—H15119.8
C14—C13—Br118.46 (13)C15—C16—H16119.6
C13—C14—C15118.22 (16)C11—C16—H16119.6
C2—N—C1—O179.43 (15)O—C1—C9—C80.6 (3)
C2—N—C1—C9−0.6 (2)N—C1—C9—C8−179.41 (15)
C1—N—C2—C31.0 (3)O—C1—C9—C4179.80 (15)
C1—N—C2—C10−178.22 (15)N—C1—C9—C4−0.2 (2)
N—C2—C3—C4−0.5 (2)C3—C2—C10—C112.2 (3)
C10—C2—C3—C4178.55 (16)N—C2—C10—C11−178.69 (14)
C2—C3—C4—C9−0.2 (2)C2—C10—C11—C16−106.28 (18)
C2—C3—C4—C5179.80 (16)C2—C10—C11—C1275.1 (2)
C9—C4—C5—C60.4 (2)C16—C11—C12—C130.1 (2)
C3—C4—C5—C6−179.64 (16)C10—C11—C12—C13178.82 (15)
C4—C5—C6—C70.1 (3)C11—C12—C13—C14−0.6 (3)
C5—C6—C7—C8−0.8 (3)C11—C12—C13—Br−179.29 (12)
C6—C7—C8—C90.9 (3)C12—C13—C14—C150.4 (3)
C7—C8—C9—C4−0.4 (3)Br—C13—C14—C15179.16 (13)
C7—C8—C9—C1178.80 (15)C13—C14—C15—C160.1 (3)
C5—C4—C9—C8−0.2 (2)C14—C15—C16—C11−0.6 (3)
C3—C4—C9—C8179.78 (15)C12—C11—C16—C150.4 (3)
C5—C4—C9—C1−179.46 (15)C10—C11—C16—C15−178.27 (16)
C3—C4—C9—C10.6 (2)
D—H···AD—HH···AD···AD—H···A
N—H01···Oi0.85 (3)1.96 (3)2.8036 (19)176 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N—H01⋯Oi0.85 (3)1.96 (3)2.8036 (19)176 (2)

Symmetry code: (i) .

  4 in total

1.  Synthesis of new indeno[1,2-c]isoquinolines: cytotoxic non-camptothecin topoisomerase I inhibitors.

Authors:  M Cushman; M Jayaraman; J A Vroman; A K Fukunaga; B M Fox; G Kohlhagen; D Strumberg; Y Pommier
Journal:  J Med Chem       Date:  2000-10-05       Impact factor: 7.446

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Novel, potent, and selective phosphodiesterase 5 inhibitors: synthesis and biological activities of a series of 4-aryl-1-isoquinolinone derivatives.

Authors:  T Ukita; Y Nakamura; A Kubo; Y Yamamoto; Y Moritani; K Saruta; T Higashijima; J Kotera; M Takagi; K Kikkawa; K Omori
Journal:  J Med Chem       Date:  2001-06-21       Impact factor: 7.446

4.  3-(3-Bromo-benz-yl)-1H-isochromen-1-one.

Authors:  Farukh Iftakhar Ali; Tariq Mahmood Babar; Nasim Hasan Rama; Peter G Jones
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-09-26
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.