Literature DB >> 21580016

Ethyl 2-{4-[(1,5-dibenzyl-2,4-dioxo-2,3,4,5-tetra-hydro-1H-1,5-benzo-diazepin-3-yl)meth-yl]-1H-1,2,3-triazol-1-yl}acetate.

Hind Jabli, Y Kandri Rodi, Sonia Ladeira, El Mokhtar Essassi, Seik Weng Ng.   

Abstract

The reaction of 1,5-dibenzyl-3-propargyl-1,5-benzodiazepine-2,4-dione with ethyl azido-acetate in the presence of copper sulfate pentahydrate and sodium ascorbate leads to the formation of the title regioisomer, C(30)H(29)N(5)O(4), which features a phenyl-ene ring fused with a seven-membered diazepinyl ring. The latter ring adopts a boat conformation (with the methyl-triazolylacetate-bearing C atom as the prow and the fused-ring C atoms as the stern). The benzyl groups connected to the diazepinyl ring jprotrude from the sides; the methyl-triazolylacetate substituent occupies an axial position.

Entities:  

Year:  2009        PMID: 21580016      PMCID: PMC2980270          DOI: 10.1107/S1600536809052696

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structure of the parent compound, benzodiazepin-2,4-dione, see: Négrier et al. (2006 ▶). For the crystal structure of 1,5-dibenzyl-3-propargyl-1,5-benzodiazepine-2,4-dione, see: Jabli et al. (2009 ▶).

Experimental

Crystal data

C30H29N5O4 M = 523.58 Monoclinic, a = 14.2015 (5) Å b = 10.9337 (4) Å c = 17.9368 (6) Å β = 95.699 (2)° V = 2771.37 (17) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 243 K 0.30 × 0.22 × 0.08 mm

Data collection

Bruker APEXII diffractometer 29097 measured reflections 6377 independent reflections 2690 reflections with I > 2σ(I) R int = 0.079 Standard reflections: 0

Refinement

R[F 2 > 2σ(F 2)] = 0.058 wR(F 2) = 0.174 S = 1.00 6377 reflections 352 parameters 1 restraint H-atom parameters constrained Δρmax = 0.48 e Å−3 Δρmin = −0.22 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: publCIF (Westrip, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809052696/sj2708sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809052696/sj2708Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C30H29N5O4F(000) = 1104
Mr = 523.58Dx = 1.255 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2371 reflections
a = 14.2015 (5) Åθ = 2.2–18.1°
b = 10.9337 (4) ŵ = 0.09 mm1
c = 17.9368 (6) ÅT = 243 K
β = 95.699 (2)°Block, colorless
V = 2771.37 (17) Å30.30 × 0.22 × 0.08 mm
Z = 4
Bruker APEXII diffractometer2690 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.079
graphiteθmax = 27.5°, θmin = 1.4°
φ and ω scansh = −15→18
29097 measured reflectionsk = −11→14
6377 independent reflectionsl = −23→23
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.058Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.174H-atom parameters constrained
S = 1.00w = 1/[σ2(Fo2) + (0.0719P)2 + 0.0345P] where P = (Fo2 + 2Fc2)/3
6377 reflections(Δ/σ)max = 0.001
352 parametersΔρmax = 0.48 e Å3
1 restraintΔρmin = −0.22 e Å3
xyzUiso*/Ueq
O10.37697 (14)1.09779 (17)0.39010 (11)0.0567 (6)
O20.11543 (14)1.08866 (18)0.41866 (11)0.0600 (6)
O30.70046 (15)0.63752 (18)0.54560 (12)0.0665 (6)
O40.60809 (16)0.7150 (2)0.44777 (13)0.0844 (8)
N10.31956 (15)1.0200 (2)0.27730 (12)0.0482 (6)
N20.11754 (15)1.0312 (2)0.29647 (12)0.0483 (6)
N30.31787 (17)0.7234 (2)0.46224 (13)0.0557 (7)
N40.38706 (18)0.6481 (2)0.48645 (13)0.0576 (7)
N50.45203 (16)0.7143 (2)0.52910 (12)0.0484 (6)
C10.2513 (2)0.9476 (3)0.23315 (14)0.0471 (7)
C20.2827 (3)0.8723 (3)0.17821 (18)0.0732 (10)
H20.34780.86580.17350.088*
C30.2187 (3)0.8067 (4)0.1304 (2)0.0931 (13)
H30.24040.75520.09380.112*
C40.1223 (3)0.8172 (3)0.13675 (19)0.0830 (11)
H40.07860.77530.10310.100*
C50.0908 (2)0.8889 (3)0.19218 (16)0.0630 (9)
H50.02560.89340.19710.076*
C60.1540 (2)0.9551 (2)0.24119 (14)0.0455 (7)
C70.38849 (19)1.0938 (3)0.23979 (16)0.0544 (8)
H7A0.38871.17680.26040.065*
H7B0.36581.09960.18650.065*
C80.49003 (19)1.0480 (2)0.24595 (15)0.0459 (7)
C90.5521 (2)1.1034 (3)0.20078 (16)0.0561 (8)
H90.52941.16430.16660.067*
C100.6470 (2)1.0702 (3)0.2054 (2)0.0703 (10)
H100.68751.10730.17370.084*
C110.6819 (2)0.9829 (3)0.25645 (19)0.0705 (9)
H110.74640.96180.26040.085*
C120.6217 (2)0.9267 (3)0.30160 (18)0.0628 (9)
H120.64510.86670.33620.075*
C130.5257 (2)0.9588 (3)0.29596 (16)0.0558 (8)
H130.48490.91940.32650.067*
C140.0279 (2)1.0971 (3)0.27638 (17)0.0630 (9)
H14A0.01491.14990.31830.076*
H14B−0.02371.03750.26880.076*
C150.0286 (2)1.1742 (3)0.20694 (15)0.0498 (7)
C16−0.0512 (2)1.1786 (3)0.15552 (17)0.0598 (8)
H16−0.10451.13140.16360.072*
C17−0.0530 (3)1.2522 (3)0.09205 (19)0.0702 (10)
H17−0.10711.25380.05740.084*
C180.0242 (3)1.3224 (3)0.08008 (19)0.0728 (10)
H180.02271.37200.03720.087*
C190.1046 (2)1.3204 (3)0.1311 (2)0.0711 (9)
H190.15721.36890.12310.085*
C200.1064 (2)1.2457 (3)0.19446 (18)0.0637 (9)
H200.16071.24380.22890.076*
C210.32027 (19)1.0305 (2)0.35331 (16)0.0449 (7)
C220.24439 (18)0.9589 (2)0.38906 (14)0.0408 (6)
H220.23730.87740.36520.049*
C230.15274 (19)1.0309 (2)0.37117 (16)0.0456 (7)
C240.27037 (19)0.9424 (2)0.47331 (14)0.0475 (7)
H24A0.29861.01810.49450.057*
H24B0.21290.92600.49770.057*
C250.33895 (19)0.8388 (2)0.48895 (14)0.0424 (7)
C260.4240 (2)0.8323 (2)0.53126 (15)0.0493 (7)
H260.45670.89690.55680.059*
C270.5400 (2)0.6571 (3)0.56053 (16)0.0526 (8)
H27A0.52940.56950.56740.063*
H27B0.55940.69270.60980.063*
C280.6185 (2)0.6746 (3)0.51023 (19)0.0557 (8)
C290.7809 (2)0.6436 (4)0.5009 (2)0.0954 (13)
H29A0.79790.72910.49280.114*
H29B0.76450.60520.45200.114*
C300.8613 (3)0.5788 (4)0.5417 (3)0.155 (2)
H30A0.91540.58190.51270.232*
H30B0.84410.49420.54930.232*
H30C0.87740.61770.58990.232*
U11U22U33U12U13U23
O10.0539 (13)0.0544 (12)0.0612 (13)−0.0108 (10)0.0030 (11)−0.0064 (10)
O20.0620 (14)0.0655 (13)0.0542 (13)0.0135 (11)0.0145 (11)−0.0095 (11)
O30.0555 (14)0.0591 (14)0.0836 (16)0.0036 (11)−0.0003 (13)0.0102 (11)
O40.0740 (17)0.120 (2)0.0600 (15)0.0123 (14)0.0093 (13)0.0211 (14)
N10.0452 (14)0.0583 (15)0.0424 (14)−0.0054 (12)0.0108 (12)0.0026 (11)
N20.0456 (14)0.0554 (14)0.0442 (14)0.0092 (11)0.0058 (11)0.0036 (11)
N30.0560 (16)0.0506 (15)0.0588 (16)0.0016 (13)−0.0017 (13)−0.0098 (12)
N40.0586 (17)0.0468 (14)0.0656 (17)−0.0035 (13)−0.0027 (14)−0.0102 (13)
N50.0538 (15)0.0400 (13)0.0500 (14)−0.0046 (12)−0.0013 (12)0.0011 (11)
C10.0504 (19)0.0582 (18)0.0341 (15)−0.0024 (15)0.0103 (14)−0.0017 (13)
C20.074 (2)0.092 (3)0.059 (2)−0.005 (2)0.0277 (19)−0.0179 (19)
C30.106 (3)0.117 (3)0.060 (2)−0.021 (3)0.029 (2)−0.041 (2)
C40.096 (3)0.107 (3)0.047 (2)−0.036 (2)0.010 (2)−0.022 (2)
C50.063 (2)0.080 (2)0.0463 (19)−0.0135 (18)0.0049 (17)0.0028 (17)
C60.0501 (19)0.0516 (17)0.0346 (15)−0.0020 (14)0.0037 (14)0.0011 (13)
C70.0527 (19)0.0597 (19)0.0523 (18)−0.0017 (15)0.0127 (15)0.0151 (14)
C80.0487 (18)0.0422 (16)0.0476 (17)−0.0058 (14)0.0077 (14)−0.0022 (14)
C90.055 (2)0.0580 (19)0.0560 (19)−0.0057 (16)0.0088 (16)0.0116 (15)
C100.053 (2)0.078 (2)0.082 (2)−0.0051 (18)0.0116 (19)0.0160 (19)
C110.055 (2)0.077 (2)0.081 (2)0.0072 (18)0.012 (2)0.007 (2)
C120.068 (2)0.0550 (19)0.066 (2)0.0146 (17)0.0066 (18)0.0096 (16)
C130.064 (2)0.0494 (18)0.0564 (19)0.0017 (16)0.0162 (16)0.0082 (15)
C140.0445 (19)0.079 (2)0.066 (2)0.0117 (16)0.0066 (16)0.0145 (17)
C150.0445 (18)0.0548 (18)0.0497 (18)0.0076 (15)0.0027 (15)0.0049 (14)
C160.051 (2)0.065 (2)0.064 (2)0.0076 (16)0.0083 (17)0.0019 (17)
C170.067 (2)0.081 (3)0.061 (2)0.020 (2)0.0015 (19)0.0083 (18)
C180.095 (3)0.067 (2)0.058 (2)0.022 (2)0.016 (2)0.0151 (17)
C190.071 (2)0.067 (2)0.078 (2)−0.0035 (18)0.019 (2)0.0073 (19)
C200.055 (2)0.069 (2)0.067 (2)−0.0023 (17)0.0032 (17)0.0048 (17)
C210.0426 (17)0.0426 (16)0.0500 (18)0.0038 (14)0.0067 (15)−0.0001 (14)
C220.0447 (16)0.0393 (15)0.0391 (15)0.0020 (13)0.0082 (13)−0.0030 (12)
C230.0482 (18)0.0458 (16)0.0438 (17)−0.0001 (14)0.0102 (15)−0.0004 (13)
C240.0536 (18)0.0520 (17)0.0372 (15)0.0009 (14)0.0068 (14)−0.0028 (13)
C250.0478 (18)0.0437 (16)0.0359 (15)−0.0039 (14)0.0048 (14)−0.0012 (12)
C260.059 (2)0.0362 (16)0.0519 (18)−0.0065 (14)0.0006 (16)−0.0020 (13)
C270.059 (2)0.0411 (16)0.0550 (18)0.0026 (14)−0.0058 (16)0.0086 (14)
C280.056 (2)0.0488 (18)0.061 (2)0.0044 (15)−0.0026 (18)0.0041 (15)
C290.060 (2)0.110 (3)0.118 (3)0.012 (2)0.017 (3)0.013 (3)
C300.089 (3)0.141 (5)0.235 (7)0.038 (3)0.021 (4)0.056 (4)
O1—C211.233 (3)C11—H110.9400
O2—C231.223 (3)C12—C131.402 (4)
O3—C281.333 (3)C12—H120.9400
O3—C291.461 (4)C13—H130.9400
O4—C281.200 (3)C14—C151.504 (4)
N1—C211.367 (3)C14—H14A0.9800
N1—C11.429 (3)C14—H14B0.9800
N1—C71.481 (3)C15—C161.388 (4)
N2—C231.383 (3)C15—C201.390 (4)
N2—C61.430 (3)C16—C171.392 (4)
N2—C141.477 (3)C16—H160.9400
N3—N41.322 (3)C17—C181.372 (5)
N3—C251.371 (3)C17—H170.9400
N4—N51.350 (3)C18—C191.391 (5)
N5—C261.351 (3)C18—H180.9400
N5—C271.460 (3)C19—C201.397 (4)
C1—C21.391 (4)C19—H190.9400
C1—C61.405 (4)C20—H200.9400
C2—C31.385 (5)C21—C221.524 (4)
C2—H20.9400C22—C231.528 (4)
C3—C41.389 (5)C22—C241.530 (3)
C3—H30.9400C22—H220.9900
C4—C51.376 (4)C24—C251.502 (4)
C4—H40.9400C24—H24A0.9800
C5—C61.395 (4)C24—H24B0.9800
C5—H50.9400C25—C261.363 (4)
C7—C81.520 (4)C26—H260.9400
C7—H7A0.9800C27—C281.513 (4)
C7—H7B0.9800C27—H27A0.9800
C8—C131.386 (4)C27—H27B0.9800
C8—C91.394 (4)C29—C301.475 (4)
C9—C101.390 (4)C29—H29A0.9800
C9—H90.9400C29—H29B0.9800
C10—C111.381 (4)C30—H30A0.9700
C10—H100.9400C30—H30B0.9700
C11—C121.379 (4)C30—H30C0.9700
C28—O3—C29114.8 (3)C20—C15—C14121.3 (3)
C21—N1—C1122.5 (2)C15—C16—C17120.7 (3)
C21—N1—C7117.9 (2)C15—C16—H16119.6
C1—N1—C7119.5 (2)C17—C16—H16119.6
C23—N2—C6123.3 (2)C18—C17—C16120.1 (3)
C23—N2—C14117.2 (2)C18—C17—H17120.0
C6—N2—C14118.5 (2)C16—C17—H17120.0
N4—N3—C25109.2 (2)C17—C18—C19120.3 (3)
N3—N4—N5107.2 (2)C17—C18—H18119.9
N4—N5—C26110.0 (2)C19—C18—H18119.9
N4—N5—C27120.0 (2)C18—C19—C20119.5 (3)
C26—N5—C27129.9 (2)C18—C19—H19120.3
C2—C1—C6119.6 (3)C20—C19—H19120.3
C2—C1—N1118.2 (3)C15—C20—C19120.6 (3)
C6—C1—N1122.1 (2)C15—C20—H20119.7
C3—C2—C1120.5 (3)C19—C20—H20119.7
C3—C2—H2119.7O1—C21—N1121.6 (3)
C1—C2—H2119.7O1—C21—C22122.2 (2)
C2—C3—C4119.8 (3)N1—C21—C22116.2 (2)
C2—C3—H3120.1C21—C22—C23105.7 (2)
C4—C3—H3120.1C21—C22—C24111.4 (2)
C5—C4—C3120.0 (3)C23—C22—C24112.6 (2)
C5—C4—H4120.0C21—C22—H22109.0
C3—C4—H4120.0C23—C22—H22109.0
C4—C5—C6121.1 (3)C24—C22—H22109.0
C4—C5—H5119.5O2—C23—N2122.3 (3)
C6—C5—H5119.5O2—C23—C22122.6 (2)
C5—C6—C1118.9 (3)N2—C23—C22115.0 (2)
C5—C6—N2118.9 (3)C25—C24—C22111.2 (2)
C1—C6—N2122.2 (2)C25—C24—H24A109.4
N1—C7—C8116.9 (2)C22—C24—H24A109.4
N1—C7—H7A108.1C25—C24—H24B109.4
C8—C7—H7A108.1C22—C24—H24B109.4
N1—C7—H7B108.1H24A—C24—H24B108.0
C8—C7—H7B108.1C26—C25—N3107.3 (2)
H7A—C7—H7B107.3C26—C25—C24131.7 (2)
C13—C8—C9118.1 (3)N3—C25—C24120.9 (2)
C13—C8—C7124.2 (3)N5—C26—C25106.3 (2)
C9—C8—C7117.7 (2)N5—C26—H26126.8
C10—C9—C8121.2 (3)C25—C26—H26126.8
C10—C9—H9119.4N5—C27—C28111.6 (2)
C8—C9—H9119.4N5—C27—H27A109.3
C11—C10—C9120.1 (3)C28—C27—H27A109.3
C11—C10—H10119.9N5—C27—H27B109.3
C9—C10—H10119.9C28—C27—H27B109.3
C10—C11—C12119.7 (3)H27A—C27—H27B108.0
C10—C11—H11120.2O4—C28—O3125.2 (3)
C12—C11—H11120.2O4—C28—C27125.0 (3)
C11—C12—C13120.1 (3)O3—C28—C27109.7 (3)
C11—C12—H12120.0O3—C29—C30108.4 (3)
C13—C12—H12120.0O3—C29—H29A110.0
C8—C13—C12120.9 (3)C30—C29—H29A110.0
C8—C13—H13119.6O3—C29—H29B110.0
C12—C13—H13119.6C30—C29—H29B110.0
N2—C14—C15113.5 (2)H29A—C29—H29B108.4
N2—C14—H14A108.9C29—C30—H30A109.5
C15—C14—H14A108.9C29—C30—H30B109.5
N2—C14—H14B108.9H30A—C30—H30B109.5
C15—C14—H14B108.9C29—C30—H30C109.5
H14A—C14—H14B107.7H30A—C30—H30C109.5
C16—C15—C20118.8 (3)H30B—C30—H30C109.5
C16—C15—C14119.9 (3)
C25—N3—N4—N50.5 (3)C15—C16—C17—C18−0.6 (5)
N3—N4—N5—C26−0.5 (3)C16—C17—C18—C190.0 (5)
N3—N4—N5—C27−176.5 (2)C17—C18—C19—C200.4 (5)
C21—N1—C1—C2−135.6 (3)C16—C15—C20—C19−0.3 (4)
C7—N1—C1—C248.8 (4)C14—C15—C20—C19−177.5 (3)
C21—N1—C1—C647.6 (4)C18—C19—C20—C15−0.3 (5)
C7—N1—C1—C6−128.0 (3)C1—N1—C21—O1−176.6 (2)
C6—C1—C2—C31.4 (5)C7—N1—C21—O1−0.9 (4)
N1—C1—C2—C3−175.5 (3)C1—N1—C21—C220.8 (4)
C1—C2—C3—C40.8 (6)C7—N1—C21—C22176.5 (2)
C2—C3—C4—C5−2.5 (6)O1—C21—C22—C23101.2 (3)
C3—C4—C5—C62.1 (5)N1—C21—C22—C23−76.1 (3)
C4—C5—C6—C10.0 (4)O1—C21—C22—C24−21.4 (3)
C4—C5—C6—N2178.2 (3)N1—C21—C22—C24161.2 (2)
C2—C1—C6—C5−1.8 (4)C6—N2—C23—O2−173.5 (2)
N1—C1—C6—C5175.0 (2)C14—N2—C23—O2−4.5 (4)
C2—C1—C6—N2−179.8 (3)C6—N2—C23—C229.6 (4)
N1—C1—C6—N2−3.1 (4)C14—N2—C23—C22178.7 (2)
C23—N2—C6—C5132.3 (3)C21—C22—C23—O2−108.4 (3)
C14—N2—C6—C5−36.6 (4)C24—C22—C23—O213.5 (4)
C23—N2—C6—C1−49.6 (4)C21—C22—C23—N268.5 (3)
C14—N2—C6—C1141.4 (3)C24—C22—C23—N2−169.7 (2)
C21—N1—C7—C877.6 (3)C21—C22—C24—C25−80.8 (3)
C1—N1—C7—C8−106.6 (3)C23—C22—C24—C25160.6 (2)
N1—C7—C8—C13−13.9 (4)N4—N3—C25—C26−0.3 (3)
N1—C7—C8—C9169.2 (2)N4—N3—C25—C24−177.0 (2)
C13—C8—C9—C100.2 (4)C22—C24—C25—C26128.0 (3)
C7—C8—C9—C10177.3 (3)C22—C24—C25—N3−56.2 (3)
C8—C9—C10—C11−1.4 (5)N4—N5—C26—C250.3 (3)
C9—C10—C11—C121.5 (5)C27—N5—C26—C25175.8 (3)
C10—C11—C12—C13−0.4 (5)N3—C25—C26—N50.0 (3)
C9—C8—C13—C120.9 (4)C24—C25—C26—N5176.2 (3)
C7—C8—C13—C12−176.0 (3)N4—N5—C27—C2893.4 (3)
C11—C12—C13—C8−0.8 (5)C26—N5—C27—C28−81.7 (3)
C23—N2—C14—C15136.3 (3)C29—O3—C28—O4−2.8 (5)
C6—N2—C14—C15−54.1 (4)C29—O3—C28—C27176.7 (3)
N2—C14—C15—C16139.8 (3)N5—C27—C28—O4−9.6 (4)
N2—C14—C15—C20−43.0 (4)N5—C27—C28—O3170.8 (2)
C20—C15—C16—C170.7 (4)C28—O3—C29—C30−169.4 (3)
C14—C15—C16—C17178.0 (3)
  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  1,5-Dibenzyl-3-propargyl-1,5-benzo-diazepine-2,4-dione.

Authors:  Hind Jabli; F Ouazzani Chahdi; Bernard Garrigues; El Mokhtar Essassi; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-11-21
  2 in total
  2 in total

1.  4-[(1,5-Dibenzyl-2,4-dioxo-2,3,4,5-tetra-hydro-1H-1,5-benzodiazepin-3-yl)meth-yl]-1-n-octyl-1H-1,2,3-triazole.

Authors:  Hind Jabli; F Ouazzani Chahdi; Natalie Saffon; El Mokhtar Essassi; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-12-24

2.  1-(12-Azido-n-dodec-yl)-4-[(1,5-dibenzyl-2,4-dioxo-2,3,4,5-tetra-hydro-1H-1,5-benzodiazepin-3-yl)meth-yl]-1H-1,2,3-triazole.

Authors:  Hind Jabli; F Ouazzani Chahdi; Natalie Saffon; El Mokhtar Essassi; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-12-24
  2 in total

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