Literature DB >> 21579960

Diiodido(1,10-phenanthroline-κN,N')platinum(II).

Kwang Ha1.   

Abstract

In the title complex, [PtI(2)(C(12)H(8)N(2))], the Pt(2+) ion is four-coordinated in a slightly distorted square-planar environment by two N atoms of the chelating 1,10-phenanthroline ligand and two iodide ions. The nearly planar mol-ecules, with a maximum deviation of 0.170 (3) Å from the least-squares plane, are stacked in columns along the c axis with a PtPt distance of 4.8510 (6) Å. In the column, π-π inter-actions between adjacent six-membered rings are present, the shortest centroid-centroid distance being 3.703 (5) Å.

Entities:  

Year:  2009        PMID: 21579960      PMCID: PMC2980094          DOI: 10.1107/S1600536809053100

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the syntheses of [PtX 2(phen)] (phen = 1,10-phenanthroline; X = Cl, Br or I), see: Hodges & Rund (1975 ▶). For the crystal structure of yellow [PtCl2(phen)] which is isotypic to the title complex, see: Grzesiak & Matzger (2007 ▶).

Experimental

Crystal data

[PtI2(C12H8N2)] M = 629.09 Monoclinic, a = 10.3284 (9) Å b = 17.9462 (16) Å c = 7.3833 (7) Å β = 108.569 (2)° V = 1297.3 (2) Å3 Z = 4 Mo Kα radiation μ = 15.55 mm−1 T = 200 K 0.32 × 0.13 × 0.08 mm

Data collection

Bruker SMART 1000 CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2000 ▶) T min = 0.422, T max = 1.000 7331 measured reflections 2284 independent reflections 2110 reflections with I > 2σ(I) R int = 0.033

Refinement

R[F 2 > 2σ(F 2)] = 0.033 wR(F 2) = 0.084 S = 1.06 2284 reflections 154 parameters H-atom parameters constrained Δρmax = 3.05 e Å−3 Δρmin = −1.40 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809053100/ng2700sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809053100/ng2700Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[PtI2(C12H8N2)]F(000) = 1112
Mr = 629.09Dx = 3.221 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 5463 reflections
a = 10.3284 (9) Åθ = 2.3–28.2°
b = 17.9462 (16) ŵ = 15.55 mm1
c = 7.3833 (7) ÅT = 200 K
β = 108.569 (2)°Needle, yellow
V = 1297.3 (2) Å30.32 × 0.13 × 0.08 mm
Z = 4
Bruker SMART 1000 CCD diffractometer2284 independent reflections
Radiation source: fine-focus sealed tube2110 reflections with I > 2σ(I)
graphiteRint = 0.033
φ and ω scansθmax = 25.1°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Bruker, 2000)h = −11→12
Tmin = 0.422, Tmax = 1.000k = −21→21
7331 measured reflectionsl = −8→8
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.033Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.084H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.0524P)2 + 0.9657P] where P = (Fo2 + 2Fc2)/3
2284 reflections(Δ/σ)max < 0.001
154 parametersΔρmax = 3.05 e Å3
0 restraintsΔρmin = −1.40 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Pt10.71220 (3)0.337678 (16)0.39502 (4)0.02011 (13)
I10.74244 (6)0.48072 (3)0.41617 (8)0.03146 (17)
I20.45788 (6)0.35783 (3)0.20604 (9)0.03744 (18)
N10.7037 (6)0.2230 (4)0.3858 (8)0.0245 (15)
N20.9082 (6)0.3142 (4)0.5563 (9)0.0219 (13)
C10.6012 (9)0.1789 (5)0.2965 (12)0.034 (2)
H10.51670.20050.22370.041*
C20.6130 (9)0.1009 (5)0.3056 (13)0.035 (2)
H20.53760.07090.23670.042*
C30.7305 (10)0.0681 (6)0.4114 (11)0.036 (2)
H30.73750.01530.41950.044*
C40.8426 (9)0.1132 (4)0.5097 (12)0.0291 (19)
C50.9726 (10)0.0861 (5)0.6267 (13)0.034 (2)
H50.98620.03380.64190.041*
C61.0755 (9)0.1317 (5)0.7155 (13)0.0317 (19)
H61.16020.11140.79210.038*
C71.0598 (8)0.2110 (4)0.6964 (11)0.0248 (17)
C81.1647 (8)0.2622 (5)0.7825 (11)0.0311 (19)
H81.25190.24530.86000.037*
C91.1388 (9)0.3359 (4)0.7527 (12)0.0300 (19)
H91.20910.37080.81010.036*
C101.0137 (8)0.3614 (5)0.6417 (11)0.0261 (17)
H100.99990.41350.62360.031*
C110.9351 (8)0.2394 (4)0.5838 (10)0.0208 (16)
C120.8236 (8)0.1915 (4)0.4917 (11)0.0233 (17)
U11U22U33U12U13U23
Pt10.0168 (2)0.0209 (2)0.0209 (2)−0.00133 (10)0.00349 (14)−0.00034 (10)
I10.0309 (3)0.0217 (3)0.0393 (3)0.0010 (2)0.0077 (3)0.0001 (2)
I20.0184 (3)0.0439 (4)0.0433 (4)0.0001 (2)0.0004 (2)0.0026 (3)
N10.024 (4)0.028 (4)0.023 (3)−0.004 (3)0.010 (3)−0.002 (3)
N20.018 (4)0.025 (3)0.022 (3)0.001 (3)0.006 (3)0.001 (3)
C10.031 (5)0.040 (5)0.032 (5)−0.019 (4)0.010 (4)−0.012 (4)
C20.030 (5)0.034 (5)0.041 (5)−0.015 (4)0.011 (4)−0.007 (4)
C30.059 (7)0.026 (5)0.031 (5)−0.006 (4)0.025 (5)−0.005 (3)
C40.043 (5)0.021 (4)0.031 (4)−0.005 (4)0.023 (4)0.001 (3)
C50.048 (6)0.024 (5)0.038 (5)0.009 (4)0.023 (5)0.002 (4)
C60.028 (5)0.032 (5)0.038 (5)0.003 (4)0.014 (4)0.004 (4)
C70.019 (4)0.030 (4)0.027 (4)0.007 (3)0.009 (3)0.003 (3)
C80.020 (4)0.046 (5)0.025 (4)0.010 (4)0.005 (3)0.006 (4)
C90.026 (5)0.033 (5)0.025 (4)−0.005 (3)0.000 (4)−0.001 (3)
C100.017 (4)0.023 (4)0.032 (4)−0.008 (3)−0.001 (3)−0.003 (3)
C110.024 (4)0.019 (4)0.021 (4)−0.003 (3)0.010 (3)0.000 (3)
C120.033 (5)0.021 (4)0.022 (4)−0.001 (3)0.016 (4)0.003 (3)
Pt1—N22.039 (6)C4—C121.419 (11)
Pt1—N12.060 (7)C4—C51.431 (13)
Pt1—I22.5774 (7)C5—C61.337 (12)
Pt1—I12.5847 (6)C5—H50.9500
N1—C11.319 (10)C6—C71.434 (11)
N1—C121.360 (10)C6—H60.9500
N2—C101.365 (10)C7—C111.389 (11)
N2—C111.374 (10)C7—C81.407 (12)
C1—C21.405 (13)C8—C91.354 (12)
C1—H10.9500C8—H80.9500
C2—C31.351 (13)C9—C101.369 (12)
C2—H20.9500C9—H90.9500
C3—C41.410 (12)C10—H100.9500
C3—H30.9500C11—C121.423 (11)
N2—Pt1—N180.6 (2)C6—C5—C4122.3 (8)
N2—Pt1—I2175.02 (17)C6—C5—H5118.9
N1—Pt1—I295.57 (17)C4—C5—H5118.9
N2—Pt1—I195.23 (18)C5—C6—C7120.8 (8)
N1—Pt1—I1175.72 (17)C5—C6—H6119.6
I2—Pt1—I188.63 (2)C7—C6—H6119.6
C1—N1—C12118.5 (8)C11—C7—C8117.7 (7)
C1—N1—Pt1129.5 (6)C11—C7—C6118.5 (7)
C12—N1—Pt1112.1 (5)C8—C7—C6123.8 (7)
C10—N2—C11116.4 (7)C9—C8—C7118.7 (8)
C10—N2—Pt1129.8 (5)C9—C8—H8120.6
C11—N2—Pt1113.8 (5)C7—C8—H8120.6
N1—C1—C2122.1 (9)C8—C9—C10121.5 (8)
N1—C1—H1119.0C8—C9—H9119.2
C2—C1—H1119.0C10—C9—H9119.2
C3—C2—C1120.6 (8)N2—C10—C9122.1 (8)
C3—C2—H2119.7N2—C10—H10118.9
C1—C2—H2119.7C9—C10—H10118.9
C2—C3—C4119.2 (9)N2—C11—C7123.5 (7)
C2—C3—H3120.4N2—C11—C12115.2 (7)
C4—C3—H3120.4C7—C11—C12121.3 (7)
C3—C4—C12117.0 (8)N1—C12—C4122.6 (7)
C3—C4—C5125.0 (8)N1—C12—C11118.2 (7)
C12—C4—C5117.9 (7)C4—C12—C11119.1 (7)
N2—Pt1—N1—C1−178.5 (7)Pt1—N2—C10—C9177.2 (6)
I2—Pt1—N1—C14.8 (7)C8—C9—C10—N20.4 (13)
N2—Pt1—N1—C122.5 (5)C10—N2—C11—C72.1 (10)
I2—Pt1—N1—C12−174.3 (4)Pt1—N2—C11—C7−176.9 (6)
N1—Pt1—N2—C10179.0 (7)C10—N2—C11—C12−179.5 (6)
I1—Pt1—N2—C100.1 (7)Pt1—N2—C11—C121.6 (8)
N1—Pt1—N2—C11−2.2 (5)C8—C7—C11—N2−1.6 (11)
I1—Pt1—N2—C11178.8 (4)C6—C7—C11—N2179.6 (7)
C12—N1—C1—C2−0.9 (11)C8—C7—C11—C12−179.9 (7)
Pt1—N1—C1—C2−179.9 (6)C6—C7—C11—C121.2 (10)
N1—C1—C2—C31.6 (12)C1—N1—C12—C40.0 (10)
C1—C2—C3—C4−1.4 (12)Pt1—N1—C12—C4179.2 (5)
C2—C3—C4—C120.5 (11)C1—N1—C12—C11178.4 (7)
C2—C3—C4—C5179.9 (8)Pt1—N1—C12—C11−2.4 (8)
C3—C4—C5—C6179.5 (7)C3—C4—C12—N10.2 (10)
C12—C4—C5—C6−1.1 (12)C5—C4—C12—N1−179.3 (7)
C4—C5—C6—C7−0.2 (12)C3—C4—C12—C11−178.2 (7)
C5—C6—C7—C110.1 (11)C5—C4—C12—C112.4 (10)
C5—C6—C7—C8−178.6 (8)N2—C11—C12—N10.6 (10)
C11—C7—C8—C90.4 (11)C7—C11—C12—N1179.1 (6)
C6—C7—C8—C9179.2 (7)N2—C11—C12—C4179.0 (6)
C7—C8—C9—C100.1 (12)C7—C11—C12—C4−2.5 (10)
C11—N2—C10—C9−1.5 (11)
Pt1—N22.039 (6)
Pt1—N12.060 (7)
Pt1—I22.5774 (7)
Pt1—I12.5847 (6)
N2—Pt1—N180.6 (2)
  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Selection and discovery of polymorphs of platinum complexes facilitated by polymer-induced heteronucleation.

Authors:  Adam L Grzesiak; Adam J Matzger
Journal:  Inorg Chem       Date:  2007-01-22       Impact factor: 5.165

3.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  3 in total

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