Literature DB >> 21579919

Dimethano-lbis[4,4,5,5-tetra-methyl-2-(5-methyl-imidazol-4-yl)-2-imidazoline-1-oxyl-3-oxide-κO,N]cobalt(II) diperchlorate.

Zhi Yong Gao1, Hua Jie Guo, Wen Bei Zhang.   

Abstract

In the mononuclear title complex, [Co(C(11)H(17)N(4)O(2))(2)(CH(3)OH)(2)](ClO(4))(2), the n class="Chemical">cobalt(II) atom lies on a symmetry centre and is coordinated by two O,N-bidentate ligands and two trans-arranged O atoms of the methanol mol-ecules in a slightly distorted octa-hedral geometry. In the crystal structure, cations and anions are linked by N-H⋯O and O-H⋯O hydrogen bonds into layers parallel to the bc plane.

Entities:  

Year:  2009        PMID: 21579919      PMCID: PMC2980142          DOI: 10.1107/S1600536809051782

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the use of organic radicals as building blocks for the construction of new materials, see: Marvilliers et al. (1999 ▶); Yamamoto et al. (2001 ▶). For related structures, see: Chang et al. (2009 ▶); Zhang et al. (2007 ▶); Omata et al. (2001 ▶); Fokin et al. (2004 ▶); Wang et al. (2005 ▶). For the synthesis of the title compound, see: Ullman et al. (1970 ▶, 1972 ▶).

Experimental

Crystal data

[Co(C11H17N4O2)2(CH4O)2](ClO4)2 M = 796.49 Triclinic, a = 8.761 (3) Å b = 9.030 (3) Å c = 11.819 (4) Å α = 88.470 (8)° β = 85.260 (11)° γ = 66.638 (7)° V = 855.4 (5) Å3 Z = 1 Mo Kα radiation μ = 0.73 mm−1 T = 295 K 0.21 × 0.10 × 0.06 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.862, T max = 0.959 7639 measured reflections 3880 independent reflections 2629 reflections with I > 2σ(I) R int = 0.035

Refinement

R[F 2 > 2σ(F 2)] = 0.058 wR(F 2) = 0.169 S = 1.02 3880 reflections 229 parameters H-atom parameters constrained Δρmax = 1.11 e Å−3 Δρmin = −0.70 e Å−3 Data collection: SMART (Bruker, 2002 ▶); cell refinement: SAINT (Bruker, 2002 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: publCIF (Westrip, 2009 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809051782/rz2401sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809051782/rz2401Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Co(C11H17N4O2)2(CH4O)2](ClO4)2Z = 1
Mr = 796.49F(000) = 415
Triclinic, P1Dx = 1.546 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.761 (3) ÅCell parameters from 1879 reflections
b = 9.030 (3) Åθ = 2.5–23.8°
c = 11.819 (4) ŵ = 0.73 mm1
α = 88.470 (8)°T = 295 K
β = 85.260 (11)°Block, purple
γ = 66.638 (7)°0.21 × 0.10 × 0.06 mm
V = 855.4 (5) Å3
Bruker SMART APEXII CCD area-detector diffractometer3880 independent reflections
Radiation source: fine-focus sealed tube2629 reflections with I > 2σ(I)
graphiteRint = 0.035
phi and ω scansθmax = 27.5°, θmin = 2.5°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −11→11
Tmin = 0.862, Tmax = 0.959k = −11→11
7639 measured reflectionsl = −14→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.058Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.169H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.099P)2] where P = (Fo2 + 2Fc2)/3
3880 reflections(Δ/σ)max < 0.001
229 parametersΔρmax = 1.11 e Å3
0 restraintsΔρmin = −0.70 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)are estimated using the full covariance matrix. The cell e.s.d.'s are takeninto account individually in the estimation of e.s.d.'s in distances, anglesand torsion angles; correlations between e.s.d.'s in cell parameters are onlyused when they are defined by crystal symmetry. An approximate (isotropic)treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
Co10.50000.50000.50000.0314 (2)
O10.7069 (3)0.5395 (3)0.44273 (19)0.0368 (6)
O20.6974 (3)0.6104 (4)0.0527 (2)0.0508 (7)
O30.1971 (5)0.1192 (5)0.3303 (3)0.0772 (10)
O40.3181 (5)0.0497 (4)0.1465 (3)0.0735 (10)
O50.0366 (5)0.1057 (6)0.1857 (4)0.1136 (16)
O60.2364 (6)−0.1310 (4)0.2532 (3)0.0897 (13)
O80.3412 (3)0.7434 (3)0.4682 (2)0.0479 (7)
H8D0.32540.78100.40150.072*
N10.4844 (3)0.4351 (3)0.3332 (2)0.0343 (6)
N20.4676 (4)0.2834 (4)0.1975 (3)0.0405 (7)
H20.43570.21950.16280.049*
N30.7304 (3)0.5838 (3)0.3387 (2)0.0303 (6)
N40.7347 (3)0.6110 (4)0.1542 (2)0.0373 (7)
C10.5901 (4)0.4399 (4)0.2393 (3)0.0314 (7)
C20.5821 (4)0.3431 (4)0.1536 (3)0.0347 (7)
C30.4138 (4)0.3410 (4)0.3035 (3)0.0396 (8)
H30.33590.31680.34980.048*
C40.6842 (4)0.5387 (4)0.2443 (3)0.0313 (7)
C50.7972 (4)0.7126 (4)0.3165 (3)0.0357 (8)
C60.8510 (5)0.6844 (5)0.1892 (3)0.0425 (9)
C70.6485 (6)0.8712 (5)0.3436 (5)0.0623 (12)
H7A0.56040.88080.29700.094*
H7B0.68170.95970.32870.094*
H7C0.60980.87310.42220.094*
C80.9369 (5)0.6878 (5)0.3931 (3)0.0502 (10)
H8A0.89040.71590.46980.075*
H8B0.99450.75510.36800.075*
H8C1.01360.57680.38980.075*
C90.8249 (7)0.8374 (6)0.1205 (4)0.0746 (15)
H9A0.86360.80890.04260.112*
H9B0.88630.89290.15060.112*
H9C0.70840.90650.12530.112*
C101.0289 (5)0.5579 (7)0.1667 (4)0.0648 (13)
H10A1.03820.45900.20350.097*
H10B1.10590.59600.19600.097*
H10C1.05440.53930.08640.097*
C110.6750 (5)0.2887 (5)0.0407 (3)0.0468 (9)
H11A0.66250.19350.01700.070*
H11B0.79110.26500.04620.070*
H11C0.63130.3726−0.01390.070*
C120.2019 (5)0.8318 (5)0.5434 (4)0.0537 (10)
H12A0.12200.78330.54540.081*
H12B0.15160.94100.51760.081*
H12C0.23750.83100.61810.081*
Cl10.19354 (13)0.03724 (13)0.22937 (9)0.0534 (3)
U11U22U33U12U13U23
Co10.0307 (3)0.0365 (4)0.0318 (4)−0.0185 (3)−0.0037 (2)0.0074 (3)
O10.0374 (12)0.0511 (15)0.0307 (12)−0.0268 (11)−0.0057 (10)0.0070 (11)
O20.0599 (17)0.0717 (19)0.0359 (14)−0.0412 (15)−0.0107 (12)0.0100 (13)
O30.099 (3)0.089 (3)0.061 (2)−0.056 (2)0.0030 (19)−0.0138 (19)
O40.088 (2)0.094 (3)0.063 (2)−0.064 (2)0.0018 (18)0.0024 (18)
O50.071 (2)0.141 (4)0.137 (4)−0.044 (3)−0.049 (3)0.023 (3)
O60.156 (4)0.072 (2)0.071 (2)−0.073 (3)−0.032 (2)0.0274 (18)
O80.0429 (14)0.0436 (14)0.0524 (16)−0.0128 (12)−0.0051 (12)0.0156 (12)
N10.0322 (14)0.0399 (16)0.0360 (16)−0.0196 (13)−0.0053 (12)0.0038 (12)
N20.0428 (16)0.0409 (16)0.0486 (18)−0.0268 (14)−0.0100 (14)0.0006 (14)
N30.0323 (13)0.0363 (14)0.0296 (14)−0.0213 (12)−0.0038 (11)0.0062 (11)
N40.0393 (16)0.0487 (17)0.0331 (15)−0.0267 (14)−0.0072 (12)0.0069 (13)
C10.0313 (16)0.0322 (17)0.0339 (17)−0.0157 (14)−0.0055 (13)0.0052 (13)
C20.0319 (16)0.0374 (18)0.0395 (19)−0.0177 (15)−0.0094 (14)0.0042 (15)
C30.0339 (17)0.044 (2)0.048 (2)−0.0229 (16)−0.0082 (15)0.0094 (17)
C40.0309 (16)0.0363 (17)0.0315 (17)−0.0185 (14)−0.0022 (13)0.0035 (14)
C50.0372 (18)0.0408 (19)0.0399 (19)−0.0267 (16)−0.0063 (14)0.0053 (15)
C60.048 (2)0.057 (2)0.039 (2)−0.0388 (19)−0.0089 (16)0.0105 (17)
C70.061 (3)0.044 (2)0.088 (3)−0.027 (2)−0.003 (2)−0.005 (2)
C80.053 (2)0.067 (3)0.050 (2)−0.043 (2)−0.0154 (18)0.008 (2)
C90.108 (4)0.085 (3)0.069 (3)−0.076 (3)−0.032 (3)0.040 (3)
C100.049 (2)0.095 (4)0.058 (3)−0.039 (3)0.010 (2)−0.017 (3)
C110.049 (2)0.052 (2)0.042 (2)−0.0218 (19)−0.0002 (17)−0.0075 (17)
C120.050 (2)0.043 (2)0.062 (3)−0.0106 (19)−0.012 (2)−0.0047 (19)
Cl10.0628 (6)0.0628 (6)0.0512 (6)−0.0409 (5)−0.0164 (5)0.0139 (5)
Co1—O1i2.042 (2)C2—C111.491 (5)
Co1—O12.042 (2)C3—H30.9300
Co1—N1i2.102 (3)C5—C81.524 (5)
Co1—N12.102 (3)C5—C71.526 (6)
Co1—O8i2.127 (3)C5—C61.537 (5)
Co1—O82.127 (3)C6—C91.530 (5)
O1—N31.308 (3)C6—C101.531 (6)
O2—N41.271 (4)C7—H7A0.9600
O3—Cl11.430 (3)C7—H7B0.9600
O4—Cl11.441 (3)C7—H7C0.9600
O5—Cl11.402 (4)C8—H8A0.9600
O6—Cl11.439 (3)C8—H8B0.9600
O8—C121.415 (5)C8—H8C0.9600
O8—H8D0.8501C9—H9A0.9600
N1—C31.302 (4)C9—H9B0.9600
N1—C11.396 (4)C9—H9C0.9600
N2—C31.343 (5)C10—H10A0.9600
N2—C21.376 (4)C10—H10B0.9600
N2—H20.8600C10—H10C0.9600
N3—C41.343 (4)C11—H11A0.9600
N3—C51.504 (4)C11—H11B0.9600
N4—C41.368 (4)C11—H11C0.9600
N4—C61.506 (4)C12—H12A0.9600
C1—C21.380 (5)C12—H12B0.9600
C1—C41.440 (4)C12—H12C0.9600
O1i—Co1—O1180.000 (1)N4—C6—C9109.6 (3)
O1i—Co1—N1i88.12 (10)N4—C6—C10107.2 (3)
O1—Co1—N1i91.88 (10)C9—C6—C10111.2 (4)
O1i—Co1—N191.88 (10)N4—C6—C5100.7 (3)
O1—Co1—N188.12 (10)C9—C6—C5114.9 (4)
N1i—Co1—N1180.0C10—C6—C5112.4 (3)
O1i—Co1—O8i91.60 (10)C5—C7—H7A109.5
O1—Co1—O8i88.40 (10)C5—C7—H7B109.5
N1i—Co1—O8i90.41 (11)H7A—C7—H7B109.5
N1—Co1—O8i89.59 (11)C5—C7—H7C109.5
O1i—Co1—O888.40 (10)H7A—C7—H7C109.5
O1—Co1—O891.60 (10)H7B—C7—H7C109.5
N1i—Co1—O889.59 (11)C5—C8—H8A109.5
N1—Co1—O890.41 (11)C5—C8—H8B109.5
O8i—Co1—O8180.00 (14)H8A—C8—H8B109.5
N3—O1—Co1122.87 (18)C5—C8—H8C109.5
C12—O8—Co1122.0 (2)H8A—C8—H8C109.5
C12—O8—H8D109.8H8B—C8—H8C109.5
Co1—O8—H8D122.5C6—C9—H9A109.5
C3—N1—C1105.6 (3)C6—C9—H9B109.5
C3—N1—Co1126.3 (2)H9A—C9—H9B109.5
C1—N1—Co1125.3 (2)C6—C9—H9C109.5
C3—N2—C2109.0 (3)H9A—C9—H9C109.5
C3—N2—H2125.5H9B—C9—H9C109.5
C2—N2—H2125.5C6—C10—H10A109.5
O1—N3—C4126.8 (3)C6—C10—H10B109.5
O1—N3—C5120.2 (2)H10A—C10—H10B109.5
C4—N3—C5112.6 (3)C6—C10—H10C109.5
O2—N4—C4125.5 (3)H10A—C10—H10C109.5
O2—N4—C6123.4 (3)H10B—C10—H10C109.5
C4—N4—C6111.0 (3)C2—C11—H11A109.5
C2—C1—N1109.8 (3)C2—C11—H11B109.5
C2—C1—C4131.0 (3)H11A—C11—H11B109.5
N1—C1—C4119.2 (3)C2—C11—H11C109.5
N2—C2—C1104.0 (3)H11A—C11—H11C109.5
N2—C2—C11121.3 (3)H11B—C11—H11C109.5
C1—C2—C11134.4 (3)O8—C12—H12A109.5
N1—C3—N2111.6 (3)O8—C12—H12B109.5
N1—C3—H3124.2H12A—C12—H12B109.5
N2—C3—H3124.2O8—C12—H12C109.5
N3—C4—N4107.6 (3)H12A—C12—H12C109.5
N3—C4—C1126.3 (3)H12B—C12—H12C109.5
N4—C4—C1126.1 (3)O5—Cl1—O3111.2 (3)
N3—C5—C8109.8 (3)O5—Cl1—O6110.4 (3)
N3—C5—C7105.0 (3)O3—Cl1—O6109.6 (2)
C8—C5—C7111.4 (3)O5—Cl1—O4109.4 (3)
N3—C5—C6100.1 (3)O3—Cl1—O4108.1 (2)
C8—C5—C6115.5 (3)O6—Cl1—O4108.0 (2)
C7—C5—C6113.8 (3)
N1i—Co1—O1—N3−151.2 (2)C5—N3—C4—N48.1 (4)
N1—Co1—O1—N328.8 (2)O1—N3—C4—C14.0 (5)
O8i—Co1—O1—N3118.5 (2)C5—N3—C4—C1−168.7 (3)
O8—Co1—O1—N3−61.5 (2)O2—N4—C4—N3−172.0 (3)
O1i—Co1—O8—C1239.5 (3)C6—N4—C4—N311.4 (4)
O1—Co1—O8—C12−140.5 (3)O2—N4—C4—C14.7 (6)
N1i—Co1—O8—C12−48.7 (3)C6—N4—C4—C1−171.8 (3)
N1—Co1—O8—C12131.3 (3)C2—C1—C4—N3−155.3 (3)
O1i—Co1—N1—C3−25.0 (3)N1—C1—C4—N325.4 (5)
O1—Co1—N1—C3155.0 (3)C2—C1—C4—N428.5 (6)
O8i—Co1—N1—C366.6 (3)N1—C1—C4—N4−150.8 (3)
O8—Co1—N1—C3−113.4 (3)O1—N3—C5—C841.8 (4)
O1i—Co1—N1—C1177.2 (3)C4—N3—C5—C8−145.0 (3)
O1—Co1—N1—C1−2.8 (3)O1—N3—C5—C7−78.0 (4)
O8i—Co1—N1—C1−91.2 (3)C4—N3—C5—C795.2 (4)
O8—Co1—N1—C188.8 (3)O1—N3—C5—C6163.8 (3)
Co1—O1—N3—C4−34.9 (4)C4—N3—C5—C6−23.0 (3)
Co1—O1—N3—C5137.3 (2)O2—N4—C6—C936.9 (5)
C3—N1—C1—C2−1.0 (4)C4—N4—C6—C9−146.5 (4)
Co1—N1—C1—C2160.5 (2)O2—N4—C6—C10−83.8 (4)
C3—N1—C1—C4178.4 (3)C4—N4—C6—C1092.7 (4)
Co1—N1—C1—C4−20.1 (4)O2—N4—C6—C5158.4 (3)
C3—N2—C2—C1−0.7 (4)C4—N4—C6—C5−25.0 (4)
C3—N2—C2—C11174.6 (3)N3—C5—C6—N426.4 (3)
N1—C1—C2—N21.0 (4)C8—C5—C6—N4144.2 (3)
C4—C1—C2—N2−178.3 (3)C7—C5—C6—N4−85.1 (3)
N1—C1—C2—C11−173.3 (4)N3—C5—C6—C9144.0 (3)
C4—C1—C2—C117.4 (6)C8—C5—C6—C9−98.1 (4)
C1—N1—C3—N20.6 (4)C7—C5—C6—C932.5 (4)
Co1—N1—C3—N2−160.7 (2)N3—C5—C6—C10−87.4 (3)
C2—N2—C3—N10.0 (4)C8—C5—C6—C1030.4 (4)
O1—N3—C4—N4−179.2 (3)C7—C5—C6—C10161.1 (3)
D—H···AD—HH···AD···AD—H···A
N2—H2···O40.862.182.988 (4)156
O8—H8D···O6ii0.851.992.828 (4)167
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2⋯O40.862.182.988 (4)156
O8—H8D⋯O6i0.851.992.828 (4)167

Symmetry code: (i) .

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