| Literature DB >> 21579891 |
Patrícia D Neunfeldt, Auri R Duval, Wilson Cunico, Solange M S V Wardell, Edward R T Tiekink, James L Wardell.
Abstract
The title compound, C(11)H(14)N(4)O(4), is essentially planar with an r.m.s. deviation for the 19 non-H atoms of 0.152 Å. The conformation about the C=N bond is E, and the mol-ecule has a U-shape as the butyl group folds over towards the aromatic system. An intra-molecular C-H⋯N inter-action occurs. The crystal packing is dominated by N-H⋯O hydrogen bonding and C-H⋯O contacts, leading to twisted zigzag supra-molecular chains along the c direction. The crystal packing brings two nitro O atoms into an unusually close proximity of 2.686 (4) Å. While the nature of this inter-action is not obvious, there are several precendents for such short nitro-nitro O⋯O contacts of less than 2.70 Å in the crystallographic literature.Entities:
Year: 2010 PMID: 21579891 PMCID: PMC2979683 DOI: 10.1107/S1600536810002102
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C11H14N4O4 | |
| Monoclinic, | Mo |
| Hall symbol: -C 2yc | Cell parameters from 14843 reflections |
| θ = 2.9–27.5° | |
| µ = 0.11 mm−1 | |
| β = 106.159 (4)° | Needle, yellow |
| 0.32 × 0.03 × 0.02 mm | |
| -Nonius KappaCCD area-detector diffractometer | 2174 independent reflections |
| Radiation source: Enraf Nonius FR591 rotating anode | 1451 reflections with |
| 10 cm confocal mirrors | |
| Detector resolution: 9.091 pixels mm-1 | θmax = 25.0°, θmin = 3.0° |
| φ and ω scans | |
| Absorption correction: multi-scan ( | |
| 8172 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2174 reflections | (Δ/σ)max < 0.001 |
| 179 parameters | Δρmax = 0.28 e Å−3 |
| 0 restraints | Δρmin = −0.27 e Å−3 |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.04985 (11) | −0.5722 (7) | 0.23571 (16) | 0.0294 (8) | |
| O2 | 0.11770 (10) | −0.4264 (8) | 0.24360 (16) | 0.0360 (9) | |
| O3 | −0.03340 (10) | −0.1033 (7) | 0.37999 (16) | 0.0263 (8) | |
| O4 | −0.00644 (9) | 0.2652 (7) | 0.45386 (15) | 0.0240 (7) | |
| N1 | 0.07910 (11) | 0.3841 (8) | 0.49031 (18) | 0.0194 (8) | |
| H1N | 0.0551 (14) | 0.401 (10) | 0.505 (2) | 0.023* | |
| N2 | 0.11897 (11) | 0.5276 (8) | 0.52633 (18) | 0.0224 (9) | |
| N3 | 0.08254 (13) | −0.4163 (9) | 0.26201 (19) | 0.0267 (9) | |
| N4 | −0.00244 (11) | 0.0661 (8) | 0.41033 (19) | 0.0213 (8) | |
| C1 | 0.07833 (13) | 0.2003 (10) | 0.4333 (2) | 0.0197 (10) | |
| C2 | 0.04022 (13) | 0.0353 (10) | 0.3940 (2) | 0.0185 (9) | |
| C3 | 0.04158 (14) | −0.1701 (9) | 0.3391 (2) | 0.0191 (9) | |
| H3 | 0.0161 | −0.2868 | 0.3159 | 0.023* | |
| C4 | 0.08074 (14) | −0.2003 (10) | 0.3192 (2) | 0.0222 (10) | |
| C5 | 0.11852 (14) | −0.0324 (10) | 0.3534 (2) | 0.0242 (10) | |
| H5 | 0.1450 | −0.0528 | 0.3381 | 0.029* | |
| C6 | 0.11736 (14) | 0.1613 (10) | 0.4090 (2) | 0.0230 (10) | |
| H6 | 0.1434 | 0.2733 | 0.4321 | 0.028* | |
| C7 | 0.11826 (14) | 0.6629 (11) | 0.5855 (2) | 0.0248 (10) | |
| H7 | 0.0922 (15) | 0.660 (11) | 0.604 (2) | 0.030* | |
| C8 | 0.15800 (14) | 0.8254 (11) | 0.6307 (2) | 0.0281 (11) | |
| H8A | 0.1693 | 0.7207 | 0.6788 | 0.034* | |
| H8B | 0.1485 | 1.0266 | 0.6415 | 0.034* | |
| C9 | 0.19629 (14) | 0.8581 (12) | 0.5957 (2) | 0.0292 (11) | |
| H9A | 0.2041 | 0.6593 | 0.5802 | 0.035* | |
| H9B | 0.1863 | 0.9830 | 0.5505 | 0.035* | |
| C10 | 0.23763 (15) | 0.9966 (13) | 0.6476 (3) | 0.0382 (13) | |
| H10A | 0.2293 | 1.1896 | 0.6655 | 0.046* | |
| H10B | 0.2485 | 0.8654 | 0.6914 | 0.046* | |
| C11 | 0.27528 (16) | 1.0479 (14) | 0.6126 (3) | 0.0481 (15) | |
| H11A | 0.2826 | 0.8602 | 0.5921 | 0.072* | |
| H11B | 0.3016 | 1.1216 | 0.6503 | 0.072* | |
| H11C | 0.2660 | 1.1951 | 0.5727 | 0.072* |
| O1 | 0.0374 (18) | 0.0244 (18) | 0.0233 (16) | 0.0013 (17) | 0.0035 (14) | −0.0058 (15) |
| O2 | 0.0333 (18) | 0.050 (2) | 0.0308 (17) | 0.0130 (18) | 0.0186 (15) | −0.0036 (17) |
| O3 | 0.0273 (16) | 0.0281 (19) | 0.0246 (15) | −0.0065 (15) | 0.0090 (13) | −0.0059 (15) |
| O4 | 0.0244 (16) | 0.0223 (18) | 0.0265 (15) | 0.0017 (13) | 0.0093 (13) | −0.0074 (15) |
| N1 | 0.0163 (18) | 0.019 (2) | 0.0236 (18) | 0.0000 (16) | 0.0061 (15) | −0.0035 (17) |
| N2 | 0.0181 (17) | 0.026 (2) | 0.0231 (19) | −0.0029 (16) | 0.0052 (15) | 0.0018 (17) |
| N3 | 0.037 (2) | 0.023 (2) | 0.0218 (19) | 0.010 (2) | 0.0108 (18) | 0.0006 (17) |
| N4 | 0.0228 (19) | 0.020 (2) | 0.0219 (18) | 0.0005 (17) | 0.0078 (16) | 0.0023 (18) |
| C1 | 0.022 (2) | 0.017 (2) | 0.019 (2) | 0.0026 (19) | 0.0042 (18) | 0.0026 (19) |
| C2 | 0.019 (2) | 0.017 (2) | 0.019 (2) | −0.0002 (18) | 0.0047 (18) | 0.0006 (19) |
| C3 | 0.024 (2) | 0.010 (2) | 0.021 (2) | 0.0042 (18) | 0.0025 (18) | 0.0015 (18) |
| C4 | 0.029 (2) | 0.018 (2) | 0.021 (2) | 0.005 (2) | 0.0091 (19) | 0.0028 (19) |
| C5 | 0.022 (2) | 0.025 (3) | 0.028 (2) | 0.005 (2) | 0.0105 (19) | 0.009 (2) |
| C6 | 0.019 (2) | 0.022 (3) | 0.028 (2) | −0.0008 (19) | 0.0082 (19) | 0.006 (2) |
| C7 | 0.023 (2) | 0.027 (3) | 0.024 (2) | −0.004 (2) | 0.0054 (19) | −0.003 (2) |
| C8 | 0.030 (2) | 0.028 (3) | 0.027 (2) | −0.008 (2) | 0.009 (2) | −0.005 (2) |
| C9 | 0.027 (2) | 0.033 (3) | 0.027 (2) | −0.006 (2) | 0.006 (2) | 0.001 (2) |
| C10 | 0.032 (3) | 0.043 (4) | 0.033 (3) | −0.010 (2) | −0.002 (2) | 0.004 (3) |
| C11 | 0.032 (3) | 0.056 (4) | 0.054 (3) | −0.008 (3) | 0.009 (3) | 0.010 (3) |
| O1—N3 | 1.221 (5) | C5—H5 | 0.9500 |
| O2—N3 | 1.238 (4) | C6—H6 | 0.9500 |
| O3—N4 | 1.236 (4) | C7—C8 | 1.483 (6) |
| O4—N4 | 1.240 (4) | C7—H7 | 0.96 (4) |
| N1—C1 | 1.345 (5) | C8—C9 | 1.521 (6) |
| N1—N2 | 1.396 (5) | C8—H8A | 0.9900 |
| N1—H1N | 0.87 (4) | C8—H8B | 0.9900 |
| N2—C7 | 1.270 (5) | C9—C10 | 1.515 (6) |
| N3—C4 | 1.458 (5) | C9—H9A | 0.9900 |
| N4—C2 | 1.451 (5) | C9—H9B | 0.9900 |
| C1—C2 | 1.420 (6) | C10—C11 | 1.513 (6) |
| C1—C6 | 1.423 (5) | C10—H10A | 0.9900 |
| C2—C3 | 1.391 (6) | C10—H10B | 0.9900 |
| C3—C4 | 1.378 (5) | C11—H11A | 0.9800 |
| C3—H3 | 0.9500 | C11—H11B | 0.9800 |
| C4—C5 | 1.395 (6) | C11—H11C | 0.9800 |
| C5—C6 | 1.365 (6) | ||
| C1—N1—N2 | 118.9 (3) | N2—C7—C8 | 121.3 (4) |
| C1—N1—H1N | 119 (3) | N2—C7—H7 | 122 (3) |
| N2—N1—H1N | 122 (3) | C8—C7—H7 | 117 (3) |
| C7—N2—N1 | 114.4 (3) | C7—C8—C9 | 115.5 (4) |
| O1—N3—O2 | 124.8 (4) | C7—C8—H8A | 108.4 |
| O1—N3—C4 | 118.7 (3) | C9—C8—H8A | 108.4 |
| O2—N3—C4 | 116.6 (4) | C7—C8—H8B | 108.4 |
| O3—N4—O4 | 122.6 (3) | C9—C8—H8B | 108.4 |
| O3—N4—C2 | 119.2 (3) | H8A—C8—H8B | 107.5 |
| O4—N4—C2 | 118.2 (3) | C10—C9—C8 | 113.0 (4) |
| N1—C1—C2 | 124.0 (4) | C10—C9—H9A | 109.0 |
| N1—C1—C6 | 120.1 (4) | C8—C9—H9A | 109.0 |
| C2—C1—C6 | 115.8 (4) | C10—C9—H9B | 109.0 |
| C3—C2—C1 | 122.5 (4) | C8—C9—H9B | 109.0 |
| C3—C2—N4 | 115.9 (4) | H9A—C9—H9B | 107.8 |
| C1—C2—N4 | 121.6 (4) | C11—C10—C9 | 114.0 (4) |
| C4—C3—C2 | 118.5 (4) | C11—C10—H10A | 108.7 |
| C4—C3—H3 | 120.8 | C9—C10—H10A | 108.7 |
| C2—C3—H3 | 120.8 | C11—C10—H10B | 108.7 |
| C3—C4—C5 | 121.3 (4) | C9—C10—H10B | 108.7 |
| C3—C4—N3 | 118.8 (4) | H10A—C10—H10B | 107.6 |
| C5—C4—N3 | 119.8 (4) | C10—C11—H11A | 109.5 |
| C6—C5—C4 | 119.8 (4) | C10—C11—H11B | 109.5 |
| C6—C5—H5 | 120.1 | H11A—C11—H11B | 109.5 |
| C4—C5—H5 | 120.1 | C10—C11—H11C | 109.5 |
| C5—C6—C1 | 121.9 (4) | H11A—C11—H11C | 109.5 |
| C5—C6—H6 | 119.0 | H11B—C11—H11C | 109.5 |
| C1—C6—H6 | 119.0 |
| H··· | ||||
| N1—H1n···O4 | 0.87 (4) | 1.99 (4) | 2.616 (5) | 128 (3) |
| N1—H1n···O4i | 0.87 (4) | 2.41 (4) | 3.166 (5) | 146 (4) |
| C3—H3···O1ii | 0.95 | 2.39 | 3.335 (5) | 176 |
| C6—H6···N2 | 0.95 | 2.40 | 2.735 (5) | 100 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1n⋯O4 | 0.87 (4) | 1.99 (4) | 2.616 (5) | 128 (3) |
| N1—H1n⋯O4i | 0.87 (4) | 2.41 (4) | 3.166 (5) | 146 (4) |
| C3—H3⋯O1ii | 0.95 | 2.39 | 3.335 (5) | 176 |
| C6—H6⋯N2 | 0.95 | 2.40 | 2.735 (5) | 100 |
Symmetry codes: (i) ; (ii) .