Literature DB >> 21579871

6-Bromo-1-[2-(2-oxo-1,3-oxazolidin-3-yl)eth-yl]-1H-imidazo[4,5-b]pyridin-2(3H)-one.

H Bel-Ghacham, Y Kandri Rodi, Natalie Saffon, El Mokhtar Essassi, Seik Weng Ng.   

Abstract

The title compound, C(11)H(11)BrN(4)O(3), features an ethane fragment substituted with an almost planar (r.m.s. deviation = 0.019 Å) imidazo[4,5-b]pyridone ring system and an envelope-shaped oxazolidine unit on separate C atoms. The N-CH(2)-CH(2)-N torsion angle is 52.5 (4)°. In the crystal, pairs of mol-ecules are linked by N-H⋯O hydrogen bonds into centrosymmetric dimers.

Entities:  

Year:  2010        PMID: 21579871      PMCID: PMC2979787          DOI: 10.1107/S1600536810002679

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the medicinal properties of imidazo[4,5-b]pyridines, see: Barraclough et al. (1990 ▶); Bianchi et al. (1983 ▶); Clark et al. (1978 ▶); Janssens et al. (1985 ▶); Temple et al. (1987 ▶).

Experimental

Crystal data

C11H11BrN4O3 M = 327.15 Monoclinic, a = 27.0174 (11) Å b = 6.0141 (2) Å c = 16.6121 (6) Å β = 110.343 (2)° V = 2530.87 (16) Å3 Z = 8 Mo Kα radiation μ = 3.26 mm−1 T = 173 K 0.40 × 0.20 × 0.05 mm

Data collection

Bruker APEXII diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.356, T max = 0.854 9174 measured reflections 2224 independent reflections 1633 reflections with I > 2σ(I) R int = 0.062 Standard reflections: 0

Refinement

R[F 2 > 2σ(F 2)] = 0.038 wR(F 2) = 0.077 S = 1.02 2224 reflections 176 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.36 e Å−3 Δρmin = −0.36 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810002679/bt5180sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810002679/bt5180Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H11BrN4O3F(000) = 1312
Mr = 327.15Dx = 1.717 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 1559 reflections
a = 27.0174 (11) Åθ = 2.6–22.4°
b = 6.0141 (2) ŵ = 3.26 mm1
c = 16.6121 (6) ÅT = 173 K
β = 110.343 (2)°Plate, colorless
V = 2530.87 (16) Å30.40 × 0.20 × 0.05 mm
Z = 8
Bruker APEXII diffractometer2224 independent reflections
Radiation source: fine-focus sealed tube1633 reflections with I > 2σ(I)
graphiteRint = 0.062
φ and ω scansθmax = 25.0°, θmin = 2.6°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −26→32
Tmin = 0.356, Tmax = 0.854k = −7→7
9174 measured reflectionsl = −19→19
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.038Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.077H atoms treated by a mixture of independent and constrained refinement
S = 1.02w = 1/[σ2(Fo2) + (0.0269P)2 + 1.8498P] where P = (Fo2 + 2Fc2)/3
2224 reflections(Δ/σ)max = 0.001
176 parametersΔρmax = 0.36 e Å3
1 restraintΔρmin = −0.36 e Å3
xyzUiso*/Ueq
Br10.030317 (17)1.14052 (7)0.39869 (3)0.03436 (15)
O10.07133 (11)0.4365 (4)0.17338 (18)0.0398 (8)
O20.14847 (12)0.2803 (5)0.25167 (18)0.0447 (8)
O30.26482 (10)0.4281 (4)0.42343 (15)0.0266 (6)
N10.14287 (12)0.6468 (5)0.21101 (17)0.0236 (7)
N20.20224 (12)0.7116 (5)0.38942 (18)0.0197 (7)
N30.19871 (12)0.4599 (5)0.48386 (18)0.0225 (7)
H30.2052 (13)0.339 (3)0.5132 (18)0.022 (10)*
N40.12421 (12)0.6066 (5)0.51587 (18)0.0242 (7)
C10.12398 (18)0.4418 (7)0.2151 (2)0.0307 (10)
C20.05337 (18)0.6589 (7)0.1444 (3)0.0565 (14)
H2A0.03540.72660.18120.068*
H2B0.02860.65680.08430.068*
C30.10292 (17)0.7865 (6)0.1514 (3)0.0366 (11)
H3A0.10790.79750.09530.044*
H3B0.10260.93760.17490.044*
C40.19838 (15)0.6905 (6)0.2399 (2)0.0261 (9)
H4A0.20650.77620.19510.031*
H4B0.21760.54740.24740.031*
C50.21827 (15)0.8193 (6)0.3239 (2)0.0221 (9)
H5A0.25730.82900.34390.027*
H5B0.20400.97250.31430.027*
C60.22613 (15)0.5212 (6)0.4313 (2)0.0220 (9)
C70.15790 (14)0.6070 (6)0.4745 (2)0.0198 (8)
C80.08786 (15)0.7701 (6)0.4925 (2)0.0268 (9)
H80.06240.77770.52010.032*
C90.08554 (15)0.9282 (6)0.4302 (2)0.0227 (9)
C100.12232 (15)0.9304 (6)0.3887 (2)0.0220 (9)
H100.12181.03860.34680.026*
C110.15928 (14)0.7649 (6)0.4130 (2)0.0183 (8)
U11U22U33U12U13U23
Br10.0348 (3)0.0294 (3)0.0412 (2)0.0106 (2)0.01603 (19)0.0026 (2)
O10.0332 (19)0.0294 (17)0.0488 (19)−0.0102 (14)0.0042 (15)−0.0006 (14)
O20.055 (2)0.0231 (17)0.0475 (19)0.0033 (15)0.0068 (16)0.0151 (14)
O30.0277 (17)0.0288 (16)0.0264 (14)0.0084 (13)0.0134 (13)0.0087 (11)
N10.029 (2)0.0179 (18)0.0216 (16)−0.0027 (16)0.0057 (14)0.0021 (14)
N20.0232 (18)0.0189 (17)0.0178 (15)−0.0005 (14)0.0081 (14)0.0051 (13)
N30.030 (2)0.0186 (19)0.0194 (17)0.0056 (15)0.0091 (15)0.0093 (14)
N40.0270 (19)0.0258 (19)0.0222 (16)0.0046 (15)0.0116 (15)0.0050 (14)
C10.042 (3)0.024 (2)0.026 (2)−0.005 (2)0.010 (2)−0.0023 (18)
C20.043 (3)0.035 (3)0.072 (3)0.003 (3)−0.005 (3)0.003 (3)
C30.047 (3)0.021 (2)0.033 (2)0.006 (2)0.003 (2)0.0018 (18)
C40.031 (2)0.029 (2)0.025 (2)−0.0018 (18)0.0185 (19)0.0000 (17)
C50.023 (2)0.023 (2)0.0200 (19)−0.0004 (17)0.0075 (16)0.0040 (16)
C60.025 (2)0.022 (2)0.0183 (19)−0.0003 (18)0.0070 (18)0.0022 (16)
C70.021 (2)0.018 (2)0.0183 (18)0.0015 (17)0.0048 (16)0.0007 (16)
C80.026 (2)0.031 (2)0.027 (2)−0.0008 (19)0.0140 (19)−0.0025 (18)
C90.024 (2)0.019 (2)0.025 (2)0.0039 (16)0.0088 (18)−0.0012 (16)
C100.029 (2)0.018 (2)0.0182 (19)0.0031 (17)0.0066 (17)0.0022 (15)
C110.022 (2)0.019 (2)0.0143 (18)−0.0030 (17)0.0064 (17)−0.0032 (16)
Br1—C91.894 (4)C2—C31.512 (6)
O1—C11.349 (5)C2—H2A0.9900
O1—C21.447 (5)C2—H2B0.9900
O2—C11.213 (4)C3—H3A0.9900
O3—C61.232 (4)C3—H3B0.9900
N1—C11.345 (5)C4—C51.521 (5)
N1—C41.431 (4)C4—H4A0.9900
N1—C31.452 (5)C4—H4B0.9900
N2—C61.378 (4)C5—H5A0.9900
N2—C111.385 (4)C5—H5B0.9900
N2—C51.457 (4)C7—C111.405 (5)
N3—C61.377 (4)C8—C91.390 (5)
N3—C71.380 (4)C8—H80.9500
N3—H30.859 (10)C9—C101.393 (5)
N4—C71.318 (4)C10—C111.368 (5)
N4—C81.348 (4)C10—H100.9500
C1—O1—C2108.7 (3)C5—C4—H4A108.9
C1—N1—C4121.6 (3)N1—C4—H4B108.9
C1—N1—C3111.1 (3)C5—C4—H4B108.9
C4—N1—C3124.5 (3)H4A—C4—H4B107.7
C6—N2—C11109.9 (3)N2—C5—C4110.9 (3)
C6—N2—C5122.6 (3)N2—C5—H5A109.5
C11—N2—C5127.2 (3)C4—C5—H5A109.5
C6—N3—C7110.0 (3)N2—C5—H5B109.5
C6—N3—H3123 (2)C4—C5—H5B109.5
C7—N3—H3127 (2)H5A—C5—H5B108.0
C7—N4—C8114.5 (3)O3—C6—N3127.5 (3)
O2—C1—N1127.5 (4)O3—C6—N2126.1 (3)
O2—C1—O1122.2 (4)N3—C6—N2106.4 (3)
N1—C1—O1110.3 (3)N4—C7—N3127.6 (3)
O1—C2—C3104.9 (3)N4—C7—C11125.3 (3)
O1—C2—H2A110.8N3—C7—C11107.1 (3)
C3—C2—H2A110.8N4—C8—C9123.6 (3)
O1—C2—H2B110.8N4—C8—H8118.2
C3—C2—H2B110.8C9—C8—H8118.2
H2A—C2—H2B108.8C8—C9—C10121.3 (3)
N1—C3—C2100.8 (3)C8—C9—Br1119.6 (3)
N1—C3—H3A111.6C10—C9—Br1119.1 (3)
C2—C3—H3A111.6C11—C10—C9114.9 (3)
N1—C3—H3B111.6C11—C10—H10122.6
C2—C3—H3B111.6C9—C10—H10122.6
H3A—C3—H3B109.4C10—C11—N2133.1 (3)
N1—C4—C5113.3 (3)C10—C11—C7120.3 (3)
N1—C4—H4A108.9N2—C11—C7106.6 (3)
C4—N1—C1—O210.3 (6)C5—N2—C6—N3−176.1 (3)
C3—N1—C1—O2171.9 (4)C8—N4—C7—N3−179.2 (3)
C4—N1—C1—O1−171.3 (3)C8—N4—C7—C112.5 (5)
C3—N1—C1—O1−9.7 (4)C6—N3—C7—N4−177.8 (3)
C2—O1—C1—O2174.3 (4)C6—N3—C7—C110.8 (4)
C2—O1—C1—N1−4.2 (4)C7—N4—C8—C9−0.2 (5)
C1—O1—C2—C315.5 (5)N4—C8—C9—C10−1.6 (6)
C1—N1—C3—C218.3 (4)N4—C8—C9—Br1176.7 (3)
C4—N1—C3—C2179.3 (3)C8—C9—C10—C111.2 (5)
O1—C2—C3—N1−19.6 (4)Br1—C9—C10—C11−177.2 (3)
C1—N1—C4—C5−107.3 (4)C9—C10—C11—N2−178.5 (4)
C3—N1—C4—C593.6 (4)C9—C10—C11—C70.9 (5)
C6—N2—C5—C475.4 (4)C6—N2—C11—C10−178.0 (4)
C11—N2—C5—C4−97.5 (4)C5—N2—C11—C10−4.3 (6)
N1—C4—C5—N252.5 (4)C6—N2—C11—C72.6 (4)
C7—N3—C6—O3179.9 (4)C5—N2—C11—C7176.2 (3)
C7—N3—C6—N20.8 (4)N4—C7—C11—C10−2.9 (6)
C11—N2—C6—O3178.8 (4)N3—C7—C11—C10178.5 (3)
C5—N2—C6—O34.8 (6)N4—C7—C11—N2176.6 (3)
C11—N2—C6—N3−2.1 (4)N3—C7—C11—N2−2.0 (4)
D—H···AD—HH···AD···AD—H···A
N3—H3···O3i0.86 (1)1.94 (1)2.781 (4)167 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N3—H3⋯O3i0.86 (1)1.94 (1)2.781 (4)167 (3)

Symmetry code: (i) .

  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Synthesis and analgesic activity of 1,3-dihydro-3-(substituted phenyl)imidazo[4,5-b]pyridin-2-ones and 3-(substituted phenyl)-1,2,3-triazolo[4,5-b]pyridines.

Authors:  R L Clark; A A Pessolano; T Y Shen; D P Jacobus; H Jones; V J Lotti; L M Flataker
Journal:  J Med Chem       Date:  1978-09       Impact factor: 7.446

3.  Inotropic "A" ring substituted sulmazole and isomazole analogues.

Authors:  P Barraclough; J W Black; D Cambridge; D Collard; D Firmin; V P Gerskowitch; R C Glen; H Giles; A P Hill; R A Hull
Journal:  J Med Chem       Date:  1990-08       Impact factor: 7.446

4.  Synthesis of potential anticancer agents: imidazo[4,5-c]pyridines and imidazo[4,5-b]pyridines.

Authors:  C Temple; J D Rose; R N Comber; G A Rener
Journal:  J Med Chem       Date:  1987-10       Impact factor: 7.446

5.  New antihistaminic N-heterocyclic 4-piperidinamines. 3. Synthesis and antihistaminic activity of N-(4-piperidinyl)-3H-imidazo[4,5-b]pyridin-2-amines.

Authors:  F Janssens; J Torremans; M Janssen; R A Stokbroekx; M Luyckx; P A Janssen
Journal:  J Med Chem       Date:  1985-12       Impact factor: 7.446

  5 in total
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1.  1,3-Bis[2-(2-oxo-1,3-oxazolidin-3-yl)eth-yl]-1H-benzimidazol-2(3H)-one.

Authors:  Younes Ouzidan; Youssef Kandri Rodi; Frank R Fronczek; Ramaiyer Venkatraman; Lahcen El Ammari; El Mokhtar Essassi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-01-12
  1 in total

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