Literature DB >> 21579869

3-[2-(2,3-Dioxoindolin-1-yl)eth-yl]-1,3-oxazolidin-2-one.

Abdusalam Al Subari, Rachid Bouhfid, Hafid Zouihri, El Mokhtar Essassi, Seik Weng Ng.   

Abstract

In the title compound, C(13)H(12)N(2)O(4), the almost planar (r.m.s. deviation = 0.012 Å) dioxoindolinyl unit and the envelope-shaped oxazolidine ring (with the methyl-ene C atom bonded to the N atom as the flap) are linked by a -CH(2)-CH(2)- bridge, in which the N-C-C-N unit adopts a gauche conformation [torsion angle = 62.7 (2)°].

Entities:  

Year:  2010        PMID: 21579869      PMCID: PMC2979849          DOI: 10.1107/S1600536810002576

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of compounds with dioxoindolinyl and oxazolidinyl units, see: Alsubari et al. (2009 ▶); Bouhfid et al. (2008 ▶).

Experimental

Crystal data

C13H12N2O4 M = 260.25 Triclinic, a = 7.1198 (2) Å b = 7.4694 (2) Å c = 12.0319 (3) Å α = 83.338 (2)° β = 79.084 (2)° γ = 81.372 (2)° V = 618.64 (3) Å3 Z = 2 Mo Kα radiation μ = 0.11 mm−1 T = 293 K 0.3 × 0.3 × 0.3 mm

Data collection

Bruker APEXII diffractometer 16105 measured reflections 2856 independent reflections 2105 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.129 S = 1.07 2856 reflections 172 parameters H-atom parameters constrained Δρmax = 0.15 e Å−3 Δρmin = −0.22 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810002576/bt5178sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810002576/bt5178Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H12N2O4Z = 2
Mr = 260.25F(000) = 272
Triclinic, P1Dx = 1.397 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.1198 (2) ÅCell parameters from 4652 reflections
b = 7.4694 (2) Åθ = 2.7–25.5°
c = 12.0319 (3) ŵ = 0.11 mm1
α = 83.338 (2)°T = 293 K
β = 79.084 (2)°Block, red
γ = 81.372 (2)°0.3 × 0.3 × 0.3 mm
V = 618.64 (3) Å3
Bruker APEXII diffractometer2105 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.029
graphiteθmax = 27.5°, θmin = 1.7°
φ and ω scansh = −9→9
16105 measured reflectionsk = −9→9
2856 independent reflectionsl = −15→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.129H-atom parameters constrained
S = 1.07w = 1/[σ2(Fo2) + (0.0678P)2 + 0.0776P] where P = (Fo2 + 2Fc2)/3
2856 reflections(Δ/σ)max = 0.001
172 parametersΔρmax = 0.15 e Å3
0 restraintsΔρmin = −0.21 e Å3
xyzUiso*/Ueq
O10.52252 (19)0.72705 (19)0.96655 (11)0.0698 (4)
O20.62176 (17)0.59350 (18)0.80356 (10)0.0650 (4)
O30.0398 (2)1.06952 (18)0.81418 (11)0.0710 (4)
O40.1729 (2)1.32239 (15)0.61954 (12)0.0735 (4)
N10.30085 (18)0.66870 (17)0.87600 (10)0.0465 (3)
N20.13257 (17)0.86176 (15)0.67978 (10)0.0409 (3)
C10.4910 (2)0.6559 (2)0.87395 (13)0.0485 (4)
C20.3389 (3)0.8000 (3)1.02957 (17)0.0723 (5)
H2A0.31860.93161.01670.087*
H2B0.33250.76621.11040.087*
C30.1916 (3)0.7179 (3)0.98519 (14)0.0599 (4)
H3A0.15230.61211.03370.072*
H3B0.07880.80530.97660.072*
C40.2235 (2)0.5789 (2)0.79784 (13)0.0472 (4)
H4A0.17250.47110.83740.057*
H4B0.32670.54050.73690.057*
C50.0649 (2)0.7017 (2)0.74742 (13)0.0470 (4)
H5A0.01160.63300.70000.056*
H5B−0.03780.74040.80850.056*
C60.1067 (2)1.0296 (2)0.71898 (13)0.0477 (4)
C70.1775 (2)1.16148 (19)0.61515 (14)0.0482 (4)
C80.2403 (2)1.04883 (18)0.52062 (12)0.0408 (3)
C90.3139 (2)1.0915 (2)0.40725 (14)0.0520 (4)
H90.33301.21010.37970.062*
C100.3580 (3)0.9532 (3)0.33635 (14)0.0588 (4)
H100.40780.97830.25980.071*
C110.3288 (2)0.7779 (2)0.37813 (14)0.0563 (4)
H110.35890.68700.32850.068*
C120.2556 (2)0.7318 (2)0.49236 (13)0.0464 (4)
H120.23770.61280.51980.056*
C130.21104 (18)0.87131 (18)0.56258 (11)0.0368 (3)
U11U22U33U12U13U23
O10.0697 (8)0.0806 (9)0.0668 (8)−0.0181 (7)−0.0215 (6)−0.0121 (7)
O20.0485 (7)0.0773 (8)0.0623 (8)−0.0093 (6)0.0045 (6)0.0006 (6)
O30.0900 (9)0.0660 (8)0.0544 (7)0.0057 (7)−0.0051 (6)−0.0280 (6)
O40.0969 (10)0.0341 (6)0.0964 (10)−0.0070 (6)−0.0291 (8)−0.0164 (6)
N10.0461 (7)0.0516 (7)0.0404 (7)−0.0029 (5)−0.0048 (5)−0.0079 (5)
N20.0463 (7)0.0356 (6)0.0416 (6)−0.0052 (5)−0.0067 (5)−0.0086 (5)
C10.0532 (9)0.0461 (8)0.0448 (8)−0.0110 (7)−0.0066 (7)0.0045 (6)
C20.0919 (15)0.0705 (12)0.0573 (11)−0.0044 (10)−0.0156 (10)−0.0205 (9)
C30.0624 (11)0.0717 (11)0.0414 (9)−0.0004 (8)−0.0018 (7)−0.0108 (8)
C40.0548 (9)0.0405 (7)0.0456 (8)−0.0087 (6)−0.0054 (7)−0.0041 (6)
C50.0440 (8)0.0493 (8)0.0484 (8)−0.0124 (6)−0.0045 (6)−0.0052 (7)
C60.0503 (8)0.0427 (8)0.0515 (9)0.0020 (6)−0.0125 (7)−0.0152 (6)
C70.0504 (8)0.0358 (7)0.0633 (10)−0.0014 (6)−0.0220 (7)−0.0107 (6)
C80.0405 (7)0.0354 (7)0.0496 (8)−0.0031 (5)−0.0170 (6)−0.0048 (6)
C90.0538 (9)0.0514 (9)0.0524 (9)−0.0100 (7)−0.0186 (7)0.0082 (7)
C100.0612 (10)0.0749 (12)0.0403 (9)−0.0089 (8)−0.0113 (7)−0.0011 (8)
C110.0608 (10)0.0628 (10)0.0471 (9)0.0019 (8)−0.0124 (7)−0.0205 (8)
C120.0531 (9)0.0374 (7)0.0505 (9)−0.0023 (6)−0.0118 (7)−0.0123 (6)
C130.0354 (7)0.0358 (7)0.0413 (7)−0.0026 (5)−0.0119 (5)−0.0070 (5)
O1—C11.357 (2)C4—H4A0.9700
O1—C21.445 (2)C4—H4B0.9700
O2—C11.2099 (19)C5—H5A0.9700
O3—C61.2072 (18)C5—H5B0.9700
O4—C71.2043 (18)C6—C71.552 (2)
N1—C11.339 (2)C7—C81.455 (2)
N1—C41.4458 (19)C8—C91.384 (2)
N1—C31.4509 (19)C8—C131.394 (2)
N2—C61.3652 (18)C9—C101.378 (2)
N2—C131.4127 (17)C9—H90.9300
N2—C51.4570 (19)C10—C111.378 (3)
C2—C31.497 (3)C10—H100.9300
C2—H2A0.9700C11—C121.397 (2)
C2—H2B0.9700C11—H110.9300
C3—H3A0.9700C12—C131.3799 (19)
C3—H3B0.9700C12—H120.9300
C4—C51.518 (2)
C1—O1—C2108.70 (14)N2—C5—H5A109.0
C1—N1—C4121.55 (12)C4—C5—H5A109.0
C1—N1—C3111.44 (13)N2—C5—H5B109.0
C4—N1—C3123.13 (13)C4—C5—H5B109.0
C6—N2—C13110.57 (12)H5A—C5—H5B107.8
C6—N2—C5123.66 (13)O3—C6—N2127.54 (16)
C13—N2—C5125.33 (11)O3—C6—C7126.54 (14)
O2—C1—N1128.43 (15)N2—C6—C7105.91 (12)
O2—C1—O1122.25 (16)O4—C7—C8131.16 (17)
N1—C1—O1109.31 (14)O4—C7—C6123.49 (15)
O1—C2—C3105.01 (14)C8—C7—C6105.34 (12)
O1—C2—H2A110.7C9—C8—C13121.28 (13)
C3—C2—H2A110.7C9—C8—C7131.54 (14)
O1—C2—H2B110.7C13—C8—C7107.17 (13)
C3—C2—H2B110.7C10—C9—C8118.13 (15)
H2A—C2—H2B108.8C10—C9—H9120.9
N1—C3—C2100.50 (14)C8—C9—H9120.9
N1—C3—H3A111.7C11—C10—C9120.42 (15)
C2—C3—H3A111.7C11—C10—H10119.8
N1—C3—H3B111.7C9—C10—H10119.8
C2—C3—H3B111.7C10—C11—C12122.36 (15)
H3A—C3—H3B109.4C10—C11—H11118.8
N1—C4—C5112.13 (12)C12—C11—H11118.8
N1—C4—H4A109.2C13—C12—C11116.79 (14)
C5—C4—H4A109.2C13—C12—H12121.6
N1—C4—H4B109.2C11—C12—H12121.6
C5—C4—H4B109.2C12—C13—C8121.01 (13)
H4A—C4—H4B107.9C12—C13—N2127.98 (13)
N2—C5—C4112.80 (12)C8—C13—N2111.01 (11)
C4—N1—C1—O210.0 (2)O3—C6—C7—C8−178.75 (15)
C3—N1—C1—O2168.48 (16)N2—C6—C7—C80.25 (15)
C4—N1—C1—O1−170.25 (13)O4—C7—C8—C90.1 (3)
C3—N1—C1—O1−11.80 (18)C6—C7—C8—C9178.84 (14)
C2—O1—C1—O2176.40 (16)O4—C7—C8—C13−178.82 (17)
C2—O1—C1—N1−3.34 (19)C6—C7—C8—C13−0.11 (15)
C1—O1—C2—C316.2 (2)C13—C8—C9—C10−0.1 (2)
C1—N1—C3—C220.76 (19)C7—C8—C9—C10−178.89 (15)
C4—N1—C3—C2178.81 (14)C8—C9—C10—C110.1 (2)
O1—C2—C3—N1−21.31 (19)C9—C10—C11—C12−0.4 (3)
C1—N1—C4—C5−135.55 (14)C10—C11—C12—C130.7 (2)
C3—N1—C4—C568.55 (18)C11—C12—C13—C8−0.6 (2)
C6—N2—C5—C4−99.82 (16)C11—C12—C13—N2178.77 (13)
C13—N2—C5—C488.45 (16)C9—C8—C13—C120.3 (2)
N1—C4—C5—N262.71 (16)C7—C8—C13—C12179.42 (13)
C13—N2—C6—O3178.69 (15)C9—C8—C13—N2−179.15 (12)
C5—N2—C6—O35.9 (2)C7—C8—C13—N2−0.07 (15)
C13—N2—C6—C7−0.30 (15)C6—N2—C13—C12−179.21 (14)
C5—N2—C6—C7−173.10 (12)C5—N2—C13—C12−6.6 (2)
O3—C6—C7—O40.1 (3)C6—N2—C13—C80.24 (16)
N2—C6—C7—O4179.09 (15)C5—N2—C13—C8172.90 (12)
  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  3 in total

1.  3-[2-(5H-Indolo[2,3-b]quinoxalin-5-yl)eth-yl]-1,3-oxazolidin-2-one.

Authors:  Abdussalam Alsubari; Rachid Bouhfid; Hafid Zouihri; El Mokhtar Essassi; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-08-28

2.  3-[2-(1H-Benzimidazol-2-ylsulfan-yl)eth-yl]-1,3-oxazolidin-2-one.

Authors:  Ahmed Moussaif; El Mokhtar Essassi; Said Lazar; Hafid Zouihri; Jean Michel Leger
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-11-13

3.  5-(Pyridin-4-ylmeth-yl)-1H-pyrazolo-[3,4-d]pyrimidin-4(5H)-one.

Authors:  Abdulsalam Alsubari; Youssef Ramli; El Mokhtar Essassi; Hafid Zouihri
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-07-06
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.