| Literature DB >> 21579856 |
Aamer Saeed, Naeem Abbas, Hummera Rafique, Michael Bolte.
Abstract
The mol-ecular conformation of the title compound, C(16)H(22)N(4)O(2)S(2), is stabilized by two intramolecular N-H⋯O hydrogen bonds. The crystal packing shows N-H⋯O and N-H⋯S hydrogen bonds.Entities:
Year: 2010 PMID: 21579856 PMCID: PMC2979833 DOI: 10.1107/S1600536810001789
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C16H22N4O2S2 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 20465 reflections |
| θ = 3.4–26.0° | |
| µ = 0.31 mm−1 | |
| β = 91.949 (5)° | Block, colourless |
| 0.28 × 0.28 × 0.23 mm | |
| Stoe IPDS II two-circle diffractometer | 3360 independent reflections |
| Radiation source: fine-focus sealed tube | 2890 reflections with |
| graphite | |
| ω scans | θmax = 25.6°, θmin = 3.4° |
| Absorption correction: multi-scan ( | |
| 22483 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3360 reflections | (Δ/σ)max = 0.001 |
| 229 parameters | Δρmax = 0.23 e Å−3 |
| 0 restraints | Δρmin = −0.33 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.07444 (5) | 0.68569 (3) | 0.35994 (3) | 0.02446 (14) | |
| S2 | 0.47542 (5) | 0.79179 (3) | 0.52094 (3) | 0.02947 (14) | |
| O1 | 0.38901 (14) | 0.53284 (9) | 0.57778 (9) | 0.0278 (3) | |
| O2 | 0.83408 (13) | 0.59749 (8) | 0.58037 (9) | 0.0224 (3) | |
| C1 | 0.42857 (18) | 0.65251 (9) | 0.31239 (12) | 0.0152 (3) | |
| C2 | 0.57714 (18) | 0.67920 (9) | 0.33537 (12) | 0.0154 (3) | |
| C3 | 0.66576 (19) | 0.70843 (10) | 0.25383 (13) | 0.0206 (3) | |
| H3 | 0.7674 | 0.7249 | 0.2695 | 0.025* | |
| C4 | 0.6054 (2) | 0.71355 (11) | 0.14871 (13) | 0.0228 (4) | |
| H4 | 0.6654 | 0.7342 | 0.0927 | 0.027* | |
| C5 | 0.4579 (2) | 0.68847 (10) | 0.12589 (12) | 0.0211 (4) | |
| H5 | 0.4170 | 0.6924 | 0.0542 | 0.025* | |
| C6 | 0.36860 (19) | 0.65746 (10) | 0.20698 (12) | 0.0180 (3) | |
| H6 | 0.2678 | 0.6399 | 0.1906 | 0.022* | |
| N11 | 0.34909 (15) | 0.61572 (8) | 0.39740 (10) | 0.0160 (3) | |
| H11 | 0.401 (2) | 0.5867 (12) | 0.4430 (16) | 0.019* | |
| C11 | 0.20588 (17) | 0.62849 (10) | 0.42462 (12) | 0.0159 (3) | |
| N12 | 0.16371 (16) | 0.58921 (8) | 0.51872 (10) | 0.0168 (3) | |
| H12 | 0.072 (2) | 0.5945 (12) | 0.5357 (15) | 0.020* | |
| C12 | 0.25388 (19) | 0.54519 (10) | 0.59085 (12) | 0.0195 (3) | |
| C13 | 0.1723 (2) | 0.51260 (12) | 0.68687 (14) | 0.0272 (4) | |
| H13A | 0.1316 | 0.4581 | 0.6691 | 0.033* | |
| H13B | 0.0852 | 0.5484 | 0.7017 | 0.033* | |
| C14 | 0.2751 (2) | 0.50692 (12) | 0.78795 (14) | 0.0285 (4) | |
| H14A | 0.2206 | 0.4776 | 0.8446 | 0.034* | |
| H14B | 0.3663 | 0.4748 | 0.7711 | 0.034* | |
| C15 | 0.3251 (3) | 0.58888 (14) | 0.83166 (17) | 0.0447 (5) | |
| H15A | 0.3912 | 0.5812 | 0.8961 | 0.054* | |
| H15B | 0.2357 | 0.6205 | 0.8506 | 0.054* | |
| H15C | 0.3809 | 0.6179 | 0.7765 | 0.054* | |
| N21 | 0.64067 (16) | 0.67101 (9) | 0.44277 (10) | 0.0170 (3) | |
| H21 | 0.708 (2) | 0.6374 (13) | 0.4558 (15) | 0.020* | |
| C21 | 0.59630 (17) | 0.71486 (10) | 0.52676 (12) | 0.0171 (3) | |
| N22 | 0.65944 (15) | 0.69253 (8) | 0.62711 (11) | 0.0172 (3) | |
| H22 | 0.630 (2) | 0.7231 (13) | 0.6794 (16) | 0.021* | |
| C22 | 0.77077 (18) | 0.63670 (10) | 0.65070 (12) | 0.0178 (3) | |
| C23 | 0.8064 (2) | 0.62499 (11) | 0.76915 (12) | 0.0223 (4) | |
| H23A | 0.7462 | 0.6636 | 0.8114 | 0.027* | |
| H23B | 0.9154 | 0.6361 | 0.7847 | 0.027* | |
| C24 | 0.7692 (2) | 0.53829 (12) | 0.80244 (14) | 0.0308 (4) | |
| H24A | 0.6617 | 0.5264 | 0.7825 | 0.037* | |
| H24B | 0.8335 | 0.5000 | 0.7627 | 0.037* | |
| C25 | 0.7954 (4) | 0.52563 (15) | 0.92284 (17) | 0.0580 (8) | |
| H25A | 0.7694 | 0.4697 | 0.9415 | 0.070* | |
| H25B | 0.7314 | 0.5632 | 0.9623 | 0.070* | |
| H25C | 0.9024 | 0.5358 | 0.9424 | 0.070* |
| S1 | 0.0188 (2) | 0.0308 (3) | 0.0237 (2) | 0.00497 (16) | 0.00078 (16) | 0.01004 (17) |
| S2 | 0.0334 (3) | 0.0301 (3) | 0.0245 (2) | 0.01694 (19) | −0.00509 (18) | −0.00387 (18) |
| O1 | 0.0216 (6) | 0.0399 (8) | 0.0223 (6) | 0.0105 (5) | 0.0046 (5) | 0.0104 (5) |
| O2 | 0.0225 (6) | 0.0264 (7) | 0.0184 (6) | 0.0085 (5) | −0.0012 (4) | −0.0018 (5) |
| C1 | 0.0168 (7) | 0.0135 (8) | 0.0153 (7) | 0.0021 (6) | 0.0025 (6) | 0.0011 (6) |
| C2 | 0.0181 (8) | 0.0137 (8) | 0.0144 (7) | 0.0028 (6) | −0.0005 (6) | −0.0001 (6) |
| C3 | 0.0182 (8) | 0.0201 (9) | 0.0236 (8) | 0.0003 (6) | 0.0022 (6) | 0.0020 (6) |
| C4 | 0.0268 (9) | 0.0219 (9) | 0.0200 (8) | 0.0017 (7) | 0.0073 (6) | 0.0058 (7) |
| C5 | 0.0289 (9) | 0.0213 (9) | 0.0130 (7) | 0.0052 (7) | 0.0006 (6) | 0.0007 (6) |
| C6 | 0.0191 (8) | 0.0172 (8) | 0.0175 (7) | 0.0012 (6) | −0.0026 (6) | −0.0011 (6) |
| N11 | 0.0152 (6) | 0.0189 (7) | 0.0138 (6) | 0.0005 (5) | −0.0007 (5) | 0.0040 (5) |
| C11 | 0.0175 (8) | 0.0155 (8) | 0.0145 (7) | −0.0034 (6) | −0.0010 (6) | −0.0020 (6) |
| N12 | 0.0137 (7) | 0.0200 (7) | 0.0168 (6) | 0.0006 (5) | 0.0021 (5) | 0.0035 (5) |
| C12 | 0.0216 (8) | 0.0201 (8) | 0.0169 (7) | 0.0026 (6) | 0.0017 (6) | 0.0010 (6) |
| C13 | 0.0256 (9) | 0.0324 (10) | 0.0242 (8) | 0.0047 (7) | 0.0063 (7) | 0.0108 (7) |
| C14 | 0.0391 (10) | 0.0280 (10) | 0.0187 (8) | 0.0083 (8) | 0.0043 (7) | 0.0074 (7) |
| C15 | 0.0663 (16) | 0.0377 (12) | 0.0303 (10) | 0.0012 (11) | 0.0033 (10) | −0.0059 (9) |
| N21 | 0.0153 (7) | 0.0195 (7) | 0.0159 (6) | 0.0045 (5) | −0.0027 (5) | −0.0006 (5) |
| C21 | 0.0147 (7) | 0.0185 (8) | 0.0180 (7) | −0.0001 (6) | 0.0001 (6) | 0.0006 (6) |
| N22 | 0.0190 (7) | 0.0177 (7) | 0.0148 (6) | 0.0015 (5) | −0.0010 (5) | −0.0029 (5) |
| C22 | 0.0186 (8) | 0.0168 (8) | 0.0178 (7) | −0.0021 (6) | −0.0028 (6) | 0.0003 (6) |
| C23 | 0.0296 (9) | 0.0203 (9) | 0.0167 (8) | 0.0036 (7) | −0.0047 (6) | −0.0010 (6) |
| C24 | 0.0442 (11) | 0.0265 (10) | 0.0215 (8) | −0.0072 (8) | 0.0001 (8) | 0.0024 (7) |
| C25 | 0.115 (2) | 0.0344 (13) | 0.0240 (10) | −0.0185 (14) | −0.0110 (12) | 0.0085 (9) |
| S1—C11 | 1.6763 (16) | C13—H13A | 0.9900 |
| S2—C21 | 1.6566 (16) | C13—H13B | 0.9900 |
| O1—C12 | 1.224 (2) | C14—C15 | 1.516 (3) |
| O2—C22 | 1.234 (2) | C14—H14A | 0.9900 |
| C1—C6 | 1.395 (2) | C14—H14B | 0.9900 |
| C1—C2 | 1.401 (2) | C15—H15A | 0.9800 |
| C1—N11 | 1.4207 (19) | C15—H15B | 0.9800 |
| C2—C3 | 1.385 (2) | C15—H15C | 0.9800 |
| C2—N21 | 1.4325 (19) | N21—C21 | 1.337 (2) |
| C3—C4 | 1.393 (2) | N21—H21 | 0.83 (2) |
| C3—H3 | 0.9500 | C21—N22 | 1.395 (2) |
| C4—C5 | 1.384 (3) | N22—C22 | 1.370 (2) |
| C4—H4 | 0.9500 | N22—H22 | 0.87 (2) |
| C5—C6 | 1.394 (2) | C22—C23 | 1.503 (2) |
| C5—H5 | 0.9500 | C23—C24 | 1.527 (3) |
| C6—H6 | 0.9500 | C23—H23A | 0.9900 |
| N11—C11 | 1.334 (2) | C23—H23B | 0.9900 |
| N11—H11 | 0.86 (2) | C24—C25 | 1.516 (3) |
| C11—N12 | 1.395 (2) | C24—H24A | 0.9900 |
| N12—C12 | 1.382 (2) | C24—H24B | 0.9900 |
| N12—H12 | 0.84 (2) | C25—H25A | 0.9800 |
| C12—C13 | 1.510 (2) | C25—H25B | 0.9800 |
| C13—C14 | 1.524 (3) | C25—H25C | 0.9800 |
| C6—C1—C2 | 119.57 (14) | C15—C14—H14B | 108.9 |
| C6—C1—N11 | 122.61 (14) | C13—C14—H14B | 108.9 |
| C2—C1—N11 | 117.65 (13) | H14A—C14—H14B | 107.7 |
| C3—C2—C1 | 120.47 (14) | C14—C15—H15A | 109.5 |
| C3—C2—N21 | 119.91 (14) | C14—C15—H15B | 109.5 |
| C1—C2—N21 | 119.48 (14) | H15A—C15—H15B | 109.5 |
| C2—C3—C4 | 119.80 (15) | C14—C15—H15C | 109.5 |
| C2—C3—H3 | 120.1 | H15A—C15—H15C | 109.5 |
| C4—C3—H3 | 120.1 | H15B—C15—H15C | 109.5 |
| C5—C4—C3 | 119.94 (15) | C21—N21—C2 | 123.85 (14) |
| C5—C4—H4 | 120.0 | C21—N21—H21 | 116.0 (13) |
| C3—C4—H4 | 120.0 | C2—N21—H21 | 120.1 (13) |
| C4—C5—C6 | 120.74 (15) | N21—C21—N22 | 115.68 (14) |
| C4—C5—H5 | 119.6 | N21—C21—S2 | 125.81 (12) |
| C6—C5—H5 | 119.6 | N22—C21—S2 | 118.52 (12) |
| C5—C6—C1 | 119.45 (15) | C22—N22—C21 | 128.97 (14) |
| C5—C6—H6 | 120.3 | C22—N22—H22 | 117.5 (13) |
| C1—C6—H6 | 120.3 | C21—N22—H22 | 113.1 (13) |
| C11—N11—C1 | 127.91 (14) | O2—C22—N22 | 122.64 (14) |
| C11—N11—H11 | 114.1 (12) | O2—C22—C23 | 122.56 (15) |
| C1—N11—H11 | 117.4 (13) | N22—C22—C23 | 114.77 (14) |
| N11—C11—N12 | 114.78 (14) | C22—C23—C24 | 110.15 (14) |
| N11—C11—S1 | 127.73 (12) | C22—C23—H23A | 109.6 |
| N12—C11—S1 | 117.49 (11) | C24—C23—H23A | 109.6 |
| C12—N12—C11 | 128.39 (14) | C22—C23—H23B | 109.6 |
| C12—N12—H12 | 115.2 (13) | C24—C23—H23B | 109.6 |
| C11—N12—H12 | 116.3 (13) | H23A—C23—H23B | 108.1 |
| O1—C12—N12 | 122.84 (14) | C25—C24—C23 | 111.58 (16) |
| O1—C12—C13 | 122.44 (15) | C25—C24—H24A | 109.3 |
| N12—C12—C13 | 114.71 (14) | C23—C24—H24A | 109.3 |
| C12—C13—C14 | 112.57 (15) | C25—C24—H24B | 109.3 |
| C12—C13—H13A | 109.1 | C23—C24—H24B | 109.3 |
| C14—C13—H13A | 109.1 | H24A—C24—H24B | 108.0 |
| C12—C13—H13B | 109.1 | C24—C25—H25A | 109.5 |
| C14—C13—H13B | 109.1 | C24—C25—H25B | 109.5 |
| H13A—C13—H13B | 107.8 | H25A—C25—H25B | 109.5 |
| C15—C14—C13 | 113.35 (16) | C24—C25—H25C | 109.5 |
| C15—C14—H14A | 108.9 | H25A—C25—H25C | 109.5 |
| C13—C14—H14A | 108.9 | H25B—C25—H25C | 109.5 |
| C6—C1—C2—C3 | −1.7 (2) | C11—N12—C12—O1 | −2.4 (3) |
| N11—C1—C2—C3 | 173.81 (15) | C11—N12—C12—C13 | 178.22 (16) |
| C6—C1—C2—N21 | −177.47 (14) | O1—C12—C13—C14 | 31.9 (2) |
| N11—C1—C2—N21 | −2.0 (2) | N12—C12—C13—C14 | −148.67 (15) |
| C1—C2—C3—C4 | 1.9 (2) | C12—C13—C14—C15 | 67.2 (2) |
| N21—C2—C3—C4 | 177.67 (15) | C3—C2—N21—C21 | 113.70 (18) |
| C2—C3—C4—C5 | −0.8 (3) | C1—C2—N21—C21 | −70.5 (2) |
| C3—C4—C5—C6 | −0.4 (3) | C2—N21—C21—N22 | 173.38 (14) |
| C4—C5—C6—C1 | 0.6 (2) | C2—N21—C21—S2 | −6.7 (2) |
| C2—C1—C6—C5 | 0.4 (2) | N21—C21—N22—C22 | 6.5 (2) |
| N11—C1—C6—C5 | −174.83 (15) | S2—C21—N22—C22 | −173.42 (13) |
| C6—C1—N11—C11 | −49.1 (2) | C21—N22—C22—O2 | 1.0 (3) |
| C2—C1—N11—C11 | 135.57 (16) | C21—N22—C22—C23 | −177.18 (15) |
| C1—N11—C11—N12 | −174.00 (14) | O2—C22—C23—C24 | −61.4 (2) |
| C1—N11—C11—S1 | 5.6 (2) | N22—C22—C23—C24 | 116.77 (17) |
| N11—C11—N12—C12 | 6.0 (2) | C22—C23—C24—C25 | −176.8 (2) |
| S1—C11—N12—C12 | −173.65 (13) |
| H··· | ||||
| N11—H11···O1 | 0.86 (2) | 1.90 (2) | 2.6336 (17) | 142.6 (17) |
| N12—H12···O2i | 0.84 (2) | 2.19 (2) | 3.0309 (18) | 175.3 (19) |
| N21—H21···O2 | 0.83 (2) | 1.98 (2) | 2.6616 (18) | 139.1 (18) |
| N22—H22···S1ii | 0.87 (2) | 2.75 (2) | 3.6147 (14) | 172.0 (17) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N11—H11⋯O1 | 0.86 (2) | 1.90 (2) | 2.6336 (17) | 142.6 (17) |
| N12—H12⋯O2i | 0.84 (2) | 2.19 (2) | 3.0309 (18) | 175.3 (19) |
| N21—H21⋯O2 | 0.83 (2) | 1.98 (2) | 2.6616 (18) | 139.1 (18) |
| N22—H22⋯S1ii | 0.87 (2) | 2.75 (2) | 3.6147 (14) | 172.0 (17) |
Symmetry codes: (i) ; (ii) .