| Literature DB >> 21579830 |
Jerry P Jasinski, Ray J Butcher, Q N M Hakim Al-Arique, H S Yathirajan, B Narayana.
Abstract
IN THE CRYSTAL STRUCTURE OF IMATINIBIUM DIPICRATE [SYSTEMATIC NAME: 1-methyl-4-(4-{4-methyl-3-[4-(3-pyrid-yl)pyrimidin-2-yl-amino]-anilinocarbon-yl}benz-yl)piperazine-1,4-diium dipicrate], C(29)H(33)N(7)O(2+)·2C(6)H(2)N(3)O(7) (-), the imatinibium cation is proton-ated at both of the pyrimidine N atoms. Each of the two picrate anions inter-acts with the diprotonated cation through bifurcated N-H⋯O hydrogen bonds forming R(1) (2)(6) ring motifs. Also, an R(2) (2)(24) graph set is formed between the benzamidium -NH- group and the 4-pyridyl N atom inter-acting through N-H⋯N hydrogen-bond inter-actions. Additional weak C-H⋯Cg π-ring and π-π inter-molecular inter-actions are observed which also influence crystal packing.Entities:
Year: 2010 PMID: 21579830 PMCID: PMC2979873 DOI: 10.1107/S1600536810000577
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C29H33N7O2+·2C6H2N3O7− | |
| Triclinic, | |
| Hall symbol: -P 1 | Cu |
| Cell parameters from 9389 reflections | |
| θ = 4.2–74.0° | |
| µ = 1.02 mm−1 | |
| α = 96.74 (3)° | |
| β = 92.69 (2)° | Chunk, pale yellow |
| γ = 101.46 (7)° | 0.45 × 0.39 × 0.24 mm |
| Oxford Diffraction Xcalibur diffractometer with a Ruby (Gemini Cu) detector | 8082 independent reflections |
| Radiation source: Enhance (Cu) X-ray Source | 6946 reflections with |
| graphite | |
| Detector resolution: 10.5081 pixels mm-1 | θmax = 74.1°, θmin = 4.2° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 15890 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 8082 reflections | (Δ/σ)max = 0.001 |
| 640 parameters | Δρmax = 0.50 e Å−3 |
| 0 restraints | Δρmin = −0.27 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.3153 (2) | 0.58462 (17) | 0.49702 (9) | 0.0356 (4) | |
| N1 | 0.4213 (2) | 0.4360 (2) | 0.19545 (10) | 0.0242 (4) | |
| H1 | 0.465 (4) | 0.514 (3) | 0.2058 (13) | 0.028 (8)* | |
| N2 | 0.2325 (3) | 0.4773 (2) | 0.09313 (10) | 0.0259 (5) | |
| H2 | 0.182 (4) | 0.397 (4) | 0.0809 (15) | 0.044 (9)* | |
| C1 | 0.4665 (3) | 0.4017 (2) | 0.13475 (12) | 0.0274 (5) | |
| H1A | 0.4187 | 0.3106 | 0.1211 | 0.033* | |
| H1B | 0.5841 | 0.4127 | 0.1349 | 0.033* | |
| C2 | 0.4094 (3) | 0.4851 (2) | 0.09331 (12) | 0.0291 (5) | |
| H2A | 0.4655 | 0.5752 | 0.1049 | 0.035* | |
| H2B | 0.4371 | 0.4581 | 0.0532 | 0.035* | |
| C3 | 0.1853 (3) | 0.5056 (2) | 0.15391 (11) | 0.0264 (5) | |
| H3A | 0.0675 | 0.4925 | 0.1534 | 0.032* | |
| H3B | 0.2307 | 0.5965 | 0.1689 | 0.032* | |
| C4 | 0.2433 (3) | 0.4209 (2) | 0.19414 (11) | 0.0255 (5) | |
| H4A | 0.2118 | 0.4431 | 0.2342 | 0.031* | |
| H4B | 0.1922 | 0.3303 | 0.1807 | 0.031* | |
| C5 | 0.1813 (4) | 0.5660 (3) | 0.05447 (13) | 0.0342 (6) | |
| H5A | 0.0661 | 0.5612 | 0.0558 | 0.051* | |
| H5B | 0.2058 | 0.5413 | 0.0142 | 0.051* | |
| H5C | 0.2386 | 0.6539 | 0.0680 | 0.051* | |
| C6 | 0.4812 (3) | 0.3553 (2) | 0.23719 (12) | 0.0294 (6) | |
| H6A | 0.4361 | 0.2637 | 0.2235 | 0.035* | |
| H6B | 0.5990 | 0.3686 | 0.2370 | 0.035* | |
| C7 | 0.4370 (3) | 0.3868 (2) | 0.29871 (12) | 0.0284 (5) | |
| C8 | 0.5091 (3) | 0.5012 (2) | 0.33399 (12) | 0.0305 (6) | |
| H8A | 0.5904 | 0.5608 | 0.3193 | 0.037* | |
| C9 | 0.4627 (3) | 0.5279 (2) | 0.38995 (12) | 0.0304 (6) | |
| H9A | 0.5108 | 0.6066 | 0.4130 | 0.036* | |
| C10 | 0.3464 (3) | 0.4409 (2) | 0.41296 (12) | 0.0276 (5) | |
| C11 | 0.2752 (3) | 0.3270 (2) | 0.37767 (12) | 0.0279 (5) | |
| H11A | 0.1957 | 0.2667 | 0.3927 | 0.033* | |
| C12 | 0.3182 (3) | 0.3006 (2) | 0.32147 (12) | 0.0289 (6) | |
| H12A | 0.2668 | 0.2233 | 0.2980 | 0.035* | |
| C13 | 0.2977 (3) | 0.4734 (2) | 0.47391 (12) | 0.0292 (5) | |
| N14 | 0.2326 (3) | 0.3702 (2) | 0.49985 (10) | 0.0290 (5) | |
| H14 | 0.250 (4) | 0.298 (3) | 0.4857 (13) | 0.030 (8)* | |
| C15 | 0.1556 (3) | 0.3663 (2) | 0.55298 (12) | 0.0276 (5) | |
| C16 | 0.0846 (3) | 0.4640 (3) | 0.57780 (12) | 0.0314 (6) | |
| H16A | 0.0945 | 0.5428 | 0.5620 | 0.038* | |
| C17 | −0.0012 (3) | 0.4419 (3) | 0.62653 (13) | 0.0339 (6) | |
| H17A | −0.0498 | 0.5080 | 0.6438 | 0.041* | |
| C18 | −0.0199 (3) | 0.3286 (3) | 0.65133 (12) | 0.0315 (6) | |
| C19 | −0.1298 (4) | 0.3073 (3) | 0.70004 (14) | 0.0437 (7) | |
| H19A | −0.0708 | 0.2871 | 0.7340 | 0.066* | |
| H19B | −0.2194 | 0.2357 | 0.6867 | 0.066* | |
| H19C | −0.1708 | 0.3851 | 0.7111 | 0.066* | |
| C20 | 0.0583 (3) | 0.2345 (2) | 0.62720 (11) | 0.0264 (5) | |
| C21 | 0.1447 (3) | 0.2542 (2) | 0.57814 (12) | 0.0274 (5) | |
| H21A | 0.1971 | 0.1896 | 0.5617 | 0.033* | |
| N22 | 0.0369 (3) | 0.1166 (2) | 0.65091 (10) | 0.0295 (5) | |
| H22 | −0.053 (4) | 0.098 (3) | 0.6678 (15) | 0.040 (9)* | |
| C23 | 0.1200 (3) | 0.0202 (2) | 0.64192 (11) | 0.0264 (5) | |
| N24 | 0.0467 (3) | −0.0938 (2) | 0.65697 (10) | 0.0304 (5) | |
| C25 | 0.1278 (3) | −0.1869 (3) | 0.64831 (13) | 0.0341 (6) | |
| H25A | 0.0816 | −0.2684 | 0.6589 | 0.041* | |
| C26 | 0.2749 (3) | −0.1733 (2) | 0.62498 (13) | 0.0322 (6) | |
| H26A | 0.3286 | −0.2426 | 0.6189 | 0.039* | |
| C27 | 0.3399 (3) | −0.0522 (2) | 0.61095 (11) | 0.0267 (5) | |
| N28 | 0.2636 (3) | 0.0452 (2) | 0.62024 (9) | 0.0270 (5) | |
| C29 | 0.4951 (3) | −0.0229 (2) | 0.58435 (11) | 0.0267 (5) | |
| C30 | 0.5691 (3) | −0.1204 (2) | 0.56171 (12) | 0.0290 (5) | |
| H30A | 0.5167 | −0.2065 | 0.5635 | 0.035* | |
| N31 | 0.7095 (3) | −0.1001 (2) | 0.53756 (10) | 0.0314 (5) | |
| C32 | 0.7788 (3) | 0.0217 (3) | 0.53364 (12) | 0.0303 (6) | |
| H32A | 0.8790 | 0.0380 | 0.5169 | 0.036* | |
| C33 | 0.7121 (3) | 0.1247 (3) | 0.55272 (12) | 0.0308 (6) | |
| H33A | 0.7635 | 0.2094 | 0.5479 | 0.037* | |
| C34 | 0.5695 (3) | 0.1028 (2) | 0.57896 (12) | 0.0291 (5) | |
| H34A | 0.5225 | 0.1724 | 0.5932 | 0.035* | |
| O1A | 0.1518 (2) | 0.22087 (16) | 0.07622 (8) | 0.0291 (4) | |
| O21A | 0.3381 (2) | 0.07732 (17) | 0.12752 (9) | 0.0346 (4) | |
| O22A | 0.3131 (2) | −0.0904 (2) | 0.06313 (10) | 0.0396 (5) | |
| O41A | −0.2360 (2) | −0.33957 (17) | 0.04481 (10) | 0.0395 (5) | |
| O42A | −0.4305 (2) | −0.2407 (2) | 0.03722 (12) | 0.0493 (6) | |
| O61A | −0.3332 (3) | 0.2150 (2) | 0.07480 (12) | 0.0520 (6) | |
| O62A | −0.1032 (3) | 0.32666 (18) | 0.06299 (11) | 0.0427 (5) | |
| N2A | 0.2595 (3) | −0.0043 (2) | 0.08996 (10) | 0.0287 (5) | |
| N4A | −0.2888 (3) | −0.2408 (2) | 0.04636 (10) | 0.0311 (5) | |
| N6A | −0.1906 (3) | 0.2244 (2) | 0.06879 (10) | 0.0301 (5) | |
| C1A | 0.0479 (3) | 0.1211 (2) | 0.07465 (10) | 0.0242 (5) | |
| C2A | 0.0909 (3) | −0.0022 (2) | 0.07761 (11) | 0.0253 (5) | |
| C3A | −0.0144 (3) | −0.1176 (2) | 0.06785 (11) | 0.0265 (5) | |
| H3AA | 0.0223 | −0.1956 | 0.0674 | 0.032* | |
| C4A | −0.1766 (3) | −0.1186 (2) | 0.05852 (11) | 0.0272 (5) | |
| C5A | −0.2330 (3) | −0.0062 (2) | 0.06039 (11) | 0.0261 (5) | |
| H5AA | −0.3445 | −0.0084 | 0.0562 | 0.031* | |
| C6A | −0.1240 (3) | 0.1095 (2) | 0.06843 (11) | 0.0259 (5) | |
| O1B | 0.4787 (2) | 0.68998 (16) | 0.21876 (9) | 0.0303 (4) | |
| O21B | 0.2684 (2) | 0.84672 (18) | 0.19341 (9) | 0.0348 (4) | |
| O22B | 0.3412 (3) | 0.9982 (2) | 0.26585 (11) | 0.0493 (6) | |
| O41B | 0.8703 (3) | 1.24447 (18) | 0.21586 (10) | 0.0441 (5) | |
| O42B | 1.0597 (2) | 1.13663 (18) | 0.20751 (9) | 0.0363 (5) | |
| O61B | 0.9270 (2) | 0.6835 (2) | 0.16693 (9) | 0.0392 (5) | |
| O62B | 0.7440 (2) | 0.58469 (18) | 0.21578 (10) | 0.0405 (5) | |
| N2B | 0.3710 (3) | 0.9196 (2) | 0.22702 (11) | 0.0316 (5) | |
| N4B | 0.9186 (3) | 1.1430 (2) | 0.21198 (10) | 0.0327 (5) | |
| N6B | 0.8091 (3) | 0.6809 (2) | 0.19535 (10) | 0.0285 (5) | |
| C1B | 0.5803 (3) | 0.7898 (2) | 0.21517 (11) | 0.0248 (5) | |
| C2B | 0.5386 (3) | 0.9143 (2) | 0.22026 (11) | 0.0267 (5) | |
| C3B | 0.6441 (3) | 1.0279 (2) | 0.22022 (12) | 0.0298 (6) | |
| H3BA | 0.6099 | 1.1072 | 0.2255 | 0.036* | |
| C4B | 0.8035 (3) | 1.0239 (2) | 0.21222 (11) | 0.0281 (5) | |
| C5B | 0.8561 (3) | 0.9107 (2) | 0.20437 (11) | 0.0263 (5) | |
| H5BA | 0.9650 | 0.9103 | 0.1982 | 0.032* | |
| C6B | 0.7471 (3) | 0.7972 (2) | 0.20563 (11) | 0.0257 (5) |
| O1 | 0.0430 (11) | 0.0197 (9) | 0.0408 (11) | 0.0000 (8) | 0.0037 (9) | 0.0007 (8) |
| N1 | 0.0236 (10) | 0.0124 (10) | 0.0347 (12) | −0.0010 (8) | 0.0009 (8) | 0.0036 (8) |
| N2 | 0.0293 (11) | 0.0130 (10) | 0.0334 (11) | 0.0003 (8) | −0.0010 (9) | 0.0033 (8) |
| C1 | 0.0243 (12) | 0.0182 (12) | 0.0379 (14) | 0.0009 (9) | 0.0048 (10) | 0.0009 (10) |
| C2 | 0.0289 (13) | 0.0207 (12) | 0.0353 (14) | −0.0011 (10) | 0.0052 (11) | 0.0030 (10) |
| C3 | 0.0249 (12) | 0.0173 (12) | 0.0345 (13) | 0.0006 (9) | −0.0003 (10) | 0.0005 (9) |
| C4 | 0.0228 (12) | 0.0179 (11) | 0.0338 (13) | −0.0003 (9) | 0.0027 (10) | 0.0021 (9) |
| C5 | 0.0409 (16) | 0.0195 (13) | 0.0407 (15) | 0.0019 (11) | −0.0042 (12) | 0.0079 (11) |
| C6 | 0.0290 (13) | 0.0189 (12) | 0.0408 (15) | 0.0051 (10) | −0.0005 (11) | 0.0066 (10) |
| C7 | 0.0289 (13) | 0.0214 (12) | 0.0345 (14) | 0.0037 (10) | −0.0034 (10) | 0.0067 (10) |
| C8 | 0.0268 (13) | 0.0197 (12) | 0.0432 (15) | −0.0011 (10) | −0.0014 (11) | 0.0087 (11) |
| C9 | 0.0315 (14) | 0.0196 (12) | 0.0361 (14) | −0.0020 (10) | −0.0058 (11) | 0.0033 (10) |
| C10 | 0.0273 (13) | 0.0183 (12) | 0.0360 (14) | 0.0027 (10) | −0.0041 (10) | 0.0051 (10) |
| C11 | 0.0279 (13) | 0.0176 (12) | 0.0357 (14) | −0.0021 (10) | −0.0024 (10) | 0.0070 (10) |
| C12 | 0.0310 (13) | 0.0154 (11) | 0.0373 (14) | −0.0012 (10) | −0.0064 (11) | 0.0047 (10) |
| C13 | 0.0250 (12) | 0.0241 (13) | 0.0370 (14) | 0.0040 (10) | −0.0023 (10) | 0.0023 (10) |
| N14 | 0.0307 (12) | 0.0198 (11) | 0.0366 (12) | 0.0066 (9) | 0.0035 (9) | 0.0011 (9) |
| C15 | 0.0225 (12) | 0.0234 (12) | 0.0342 (14) | 0.0018 (10) | −0.0001 (10) | −0.0014 (10) |
| C16 | 0.0321 (14) | 0.0206 (12) | 0.0403 (15) | 0.0038 (10) | 0.0015 (11) | 0.0026 (10) |
| C17 | 0.0354 (15) | 0.0239 (13) | 0.0427 (16) | 0.0090 (11) | 0.0077 (12) | −0.0017 (11) |
| C18 | 0.0299 (14) | 0.0305 (14) | 0.0329 (14) | 0.0057 (11) | 0.0032 (11) | −0.0001 (11) |
| C19 | 0.0502 (19) | 0.0387 (17) | 0.0472 (18) | 0.0180 (14) | 0.0163 (15) | 0.0062 (13) |
| C20 | 0.0224 (12) | 0.0215 (12) | 0.0331 (13) | 0.0004 (9) | −0.0005 (10) | 0.0023 (10) |
| C21 | 0.0235 (12) | 0.0221 (12) | 0.0350 (14) | 0.0036 (10) | 0.0017 (10) | −0.0012 (10) |
| N22 | 0.0268 (11) | 0.0266 (12) | 0.0352 (12) | 0.0034 (9) | 0.0078 (9) | 0.0056 (9) |
| C23 | 0.0272 (13) | 0.0218 (12) | 0.0278 (12) | 0.0018 (10) | −0.0007 (10) | 0.0004 (9) |
| N24 | 0.0291 (11) | 0.0239 (11) | 0.0349 (12) | −0.0015 (9) | 0.0038 (9) | 0.0017 (9) |
| C25 | 0.0356 (15) | 0.0207 (13) | 0.0420 (16) | −0.0040 (11) | 0.0009 (12) | 0.0055 (11) |
| C26 | 0.0339 (14) | 0.0179 (12) | 0.0440 (16) | 0.0042 (10) | 0.0013 (12) | 0.0030 (11) |
| C27 | 0.0295 (13) | 0.0216 (12) | 0.0278 (13) | 0.0046 (10) | −0.0018 (10) | 0.0013 (9) |
| N28 | 0.0268 (11) | 0.0213 (10) | 0.0318 (11) | 0.0029 (8) | 0.0010 (9) | 0.0026 (8) |
| C29 | 0.0270 (13) | 0.0240 (13) | 0.0285 (13) | 0.0054 (10) | −0.0022 (10) | 0.0024 (10) |
| C30 | 0.0319 (14) | 0.0218 (12) | 0.0333 (14) | 0.0062 (10) | 0.0002 (11) | 0.0029 (10) |
| N31 | 0.0322 (12) | 0.0281 (12) | 0.0346 (12) | 0.0100 (9) | 0.0014 (9) | 0.0011 (9) |
| C32 | 0.0258 (13) | 0.0308 (14) | 0.0335 (14) | 0.0049 (11) | 0.0008 (10) | 0.0026 (11) |
| C33 | 0.0266 (13) | 0.0245 (13) | 0.0388 (15) | 0.0014 (10) | −0.0021 (11) | 0.0026 (11) |
| C34 | 0.0271 (13) | 0.0217 (13) | 0.0372 (14) | 0.0052 (10) | −0.0009 (11) | −0.0003 (10) |
| O1A | 0.0314 (10) | 0.0166 (9) | 0.0370 (10) | 0.0004 (7) | 0.0015 (8) | 0.0026 (7) |
| O21A | 0.0308 (10) | 0.0213 (9) | 0.0475 (12) | −0.0027 (8) | −0.0050 (8) | 0.0048 (8) |
| O22A | 0.0385 (11) | 0.0330 (11) | 0.0494 (12) | 0.0142 (9) | 0.0052 (9) | 0.0018 (9) |
| O41A | 0.0412 (11) | 0.0168 (9) | 0.0567 (13) | −0.0008 (8) | −0.0033 (9) | 0.0037 (8) |
| O42A | 0.0267 (11) | 0.0258 (11) | 0.0909 (18) | −0.0039 (8) | 0.0026 (11) | 0.0056 (11) |
| O61A | 0.0363 (12) | 0.0296 (11) | 0.0924 (19) | 0.0103 (9) | 0.0199 (12) | 0.0051 (11) |
| O62A | 0.0376 (11) | 0.0187 (10) | 0.0708 (15) | 0.0010 (8) | −0.0036 (10) | 0.0125 (9) |
| N2A | 0.0293 (11) | 0.0201 (11) | 0.0369 (12) | 0.0033 (9) | 0.0043 (9) | 0.0073 (9) |
| N4A | 0.0311 (12) | 0.0205 (11) | 0.0388 (13) | −0.0022 (9) | 0.0040 (9) | 0.0042 (9) |
| N6A | 0.0331 (12) | 0.0214 (11) | 0.0345 (12) | 0.0043 (9) | 0.0013 (9) | 0.0005 (9) |
| C1A | 0.0299 (13) | 0.0159 (11) | 0.0250 (12) | 0.0012 (10) | 0.0022 (10) | 0.0012 (9) |
| C2A | 0.0272 (13) | 0.0207 (12) | 0.0275 (12) | 0.0036 (10) | 0.0026 (10) | 0.0030 (9) |
| C3A | 0.0318 (13) | 0.0167 (11) | 0.0304 (13) | 0.0036 (10) | 0.0037 (10) | 0.0029 (9) |
| C4A | 0.0324 (14) | 0.0195 (12) | 0.0268 (12) | −0.0014 (10) | 0.0031 (10) | 0.0024 (9) |
| C5A | 0.0256 (12) | 0.0223 (12) | 0.0291 (13) | 0.0016 (10) | 0.0045 (10) | 0.0029 (10) |
| C6A | 0.0310 (13) | 0.0196 (12) | 0.0269 (12) | 0.0043 (10) | 0.0031 (10) | 0.0032 (9) |
| O1B | 0.0242 (9) | 0.0149 (8) | 0.0490 (11) | −0.0015 (7) | 0.0018 (8) | 0.0028 (7) |
| O21B | 0.0261 (9) | 0.0239 (10) | 0.0516 (12) | −0.0020 (7) | −0.0013 (8) | 0.0064 (8) |
| O22B | 0.0426 (12) | 0.0380 (12) | 0.0659 (15) | 0.0149 (10) | 0.0069 (11) | −0.0120 (11) |
| O41B | 0.0470 (13) | 0.0176 (10) | 0.0635 (14) | −0.0038 (9) | 0.0048 (10) | 0.0060 (9) |
| O42B | 0.0337 (11) | 0.0279 (10) | 0.0409 (11) | −0.0099 (8) | 0.0034 (8) | 0.0049 (8) |
| O61B | 0.0339 (11) | 0.0346 (11) | 0.0510 (12) | 0.0102 (9) | 0.0110 (9) | 0.0052 (9) |
| O62B | 0.0268 (10) | 0.0191 (9) | 0.0747 (15) | −0.0013 (8) | 0.0050 (9) | 0.0118 (9) |
| N2B | 0.0314 (12) | 0.0186 (11) | 0.0450 (13) | 0.0038 (9) | 0.0050 (10) | 0.0055 (9) |
| N4B | 0.0387 (14) | 0.0216 (11) | 0.0326 (12) | −0.0061 (10) | 0.0018 (10) | 0.0033 (9) |
| N6B | 0.0217 (10) | 0.0215 (11) | 0.0396 (12) | 0.0005 (8) | −0.0022 (9) | 0.0009 (9) |
| C1B | 0.0266 (13) | 0.0175 (12) | 0.0278 (12) | 0.0003 (10) | −0.0008 (10) | 0.0008 (9) |
| C2B | 0.0261 (13) | 0.0200 (12) | 0.0322 (13) | 0.0020 (10) | 0.0004 (10) | 0.0010 (10) |
| C3B | 0.0367 (14) | 0.0166 (12) | 0.0347 (14) | 0.0035 (10) | −0.0008 (11) | 0.0022 (10) |
| C4B | 0.0323 (14) | 0.0188 (12) | 0.0289 (13) | −0.0047 (10) | 0.0000 (10) | 0.0036 (9) |
| C5B | 0.0244 (12) | 0.0241 (13) | 0.0266 (12) | −0.0033 (10) | 0.0002 (9) | 0.0026 (9) |
| C6B | 0.0267 (13) | 0.0192 (12) | 0.0289 (13) | 0.0010 (10) | −0.0012 (10) | 0.0015 (9) |
| O1—C13 | 1.226 (3) | C23—N28 | 1.339 (3) |
| N1—C1 | 1.494 (3) | C23—N24 | 1.352 (3) |
| N1—C4 | 1.498 (3) | N24—C25 | 1.328 (4) |
| N1—C6 | 1.505 (3) | C25—C26 | 1.380 (4) |
| N1—H1 | 0.85 (3) | C25—H25A | 0.9500 |
| N2—C3 | 1.490 (3) | C26—C27 | 1.390 (4) |
| N2—C5 | 1.491 (3) | C26—H26A | 0.9500 |
| N2—C2 | 1.500 (3) | C27—N28 | 1.341 (3) |
| N2—H2 | 0.89 (4) | C27—C29 | 1.482 (4) |
| C1—C2 | 1.511 (4) | C29—C30 | 1.391 (4) |
| C1—H1A | 0.9900 | C29—C34 | 1.395 (4) |
| C1—H1B | 0.9900 | C30—N31 | 1.338 (4) |
| C2—H2A | 0.9900 | C30—H30A | 0.9500 |
| C2—H2B | 0.9900 | N31—C32 | 1.340 (4) |
| C3—C4 | 1.506 (3) | C32—C33 | 1.379 (4) |
| C3—H3A | 0.9900 | C32—H32A | 0.9500 |
| C3—H3B | 0.9900 | C33—C34 | 1.378 (4) |
| C4—H4A | 0.9900 | C33—H33A | 0.9500 |
| C4—H4B | 0.9900 | C34—H34A | 0.9500 |
| C5—H5A | 0.9800 | O1A—C1A | 1.245 (3) |
| C5—H5B | 0.9800 | O21A—N2A | 1.226 (3) |
| C5—H5C | 0.9800 | O22A—N2A | 1.228 (3) |
| C6—C7 | 1.503 (4) | O41A—N4A | 1.231 (3) |
| C6—H6A | 0.9900 | O42A—N4A | 1.221 (3) |
| C6—H6B | 0.9900 | O61A—N6A | 1.221 (3) |
| C7—C12 | 1.399 (4) | O62A—N6A | 1.225 (3) |
| C7—C8 | 1.403 (4) | N2A—C2A | 1.463 (3) |
| C8—C9 | 1.383 (4) | N4A—C4A | 1.452 (3) |
| C8—H8A | 0.9500 | N6A—C6A | 1.457 (3) |
| C9—C10 | 1.393 (4) | C1A—C2A | 1.451 (3) |
| C9—H9A | 0.9500 | C1A—C6A | 1.451 (4) |
| C10—C11 | 1.397 (3) | C2A—C3A | 1.367 (3) |
| C10—C13 | 1.506 (4) | C3A—C4A | 1.393 (4) |
| C11—C12 | 1.377 (4) | C3A—H3AA | 0.9500 |
| C11—H11A | 0.9500 | C4A—C5A | 1.382 (4) |
| C12—H12A | 0.9500 | C5A—C6A | 1.384 (3) |
| C13—N14 | 1.356 (3) | C5A—H5AA | 0.9500 |
| N14—C15 | 1.419 (3) | O1B—C1B | 1.252 (3) |
| N14—H14 | 0.85 (3) | O21B—N2B | 1.227 (3) |
| C15—C21 | 1.385 (4) | O22B—N2B | 1.228 (3) |
| C15—C16 | 1.394 (4) | O41B—N4B | 1.235 (3) |
| C16—C17 | 1.389 (4) | O42B—N4B | 1.232 (3) |
| C16—H16A | 0.9500 | O61B—N6B | 1.226 (3) |
| C17—C18 | 1.388 (4) | O62B—N6B | 1.229 (3) |
| C17—H17A | 0.9500 | N2B—C2B | 1.462 (3) |
| C18—C20 | 1.396 (4) | N4B—C4B | 1.451 (3) |
| C18—C19 | 1.508 (4) | N6B—C6B | 1.450 (3) |
| C19—H19A | 0.9800 | C1B—C6B | 1.443 (4) |
| C19—H19B | 0.9800 | C1B—C2B | 1.443 (3) |
| C19—H19C | 0.9800 | C2B—C3B | 1.366 (4) |
| C20—C21 | 1.394 (4) | C3B—C4B | 1.394 (4) |
| C20—N22 | 1.419 (3) | C3B—H3BA | 0.9500 |
| C21—H21A | 0.9500 | C4B—C5B | 1.373 (4) |
| N22—C23 | 1.369 (3) | C5B—C6B | 1.384 (3) |
| N22—H22 | 0.87 (4) | C5B—H5BA | 0.9500 |
| C1—N1—C4 | 108.6 (2) | C18—C20—N22 | 118.4 (2) |
| C1—N1—C6 | 111.1 (2) | C15—C21—C20 | 121.1 (2) |
| C4—N1—C6 | 111.62 (19) | C15—C21—H21A | 119.5 |
| C1—N1—H1 | 107 (2) | C20—C21—H21A | 119.5 |
| C4—N1—H1 | 109 (2) | C23—N22—C20 | 129.0 (2) |
| C6—N1—H1 | 109 (2) | C23—N22—H22 | 116 (2) |
| C3—N2—C5 | 110.9 (2) | C20—N22—H22 | 113 (2) |
| C3—N2—C2 | 110.4 (2) | N28—C23—N24 | 125.8 (2) |
| C5—N2—C2 | 110.8 (2) | N28—C23—N22 | 119.1 (2) |
| C3—N2—H2 | 105 (2) | N24—C23—N22 | 115.2 (2) |
| C5—N2—H2 | 110 (2) | C25—N24—C23 | 115.0 (2) |
| C2—N2—H2 | 109 (2) | N24—C25—C26 | 124.4 (2) |
| N1—C1—C2 | 110.9 (2) | N24—C25—H25A | 117.8 |
| N1—C1—H1A | 109.5 | C26—C25—H25A | 117.8 |
| C2—C1—H1A | 109.5 | C25—C26—C27 | 116.1 (2) |
| N1—C1—H1B | 109.5 | C25—C26—H26A | 121.9 |
| C2—C1—H1B | 109.5 | C27—C26—H26A | 121.9 |
| H1A—C1—H1B | 108.0 | N28—C27—C26 | 121.4 (2) |
| N2—C2—C1 | 112.1 (2) | N28—C27—C29 | 116.0 (2) |
| N2—C2—H2A | 109.2 | C26—C27—C29 | 122.6 (2) |
| C1—C2—H2A | 109.2 | C23—N28—C27 | 117.3 (2) |
| N2—C2—H2B | 109.2 | C30—C29—C34 | 117.4 (2) |
| C1—C2—H2B | 109.2 | C30—C29—C27 | 121.1 (2) |
| H2A—C2—H2B | 107.9 | C34—C29—C27 | 121.5 (2) |
| N2—C3—C4 | 111.5 (2) | N31—C30—C29 | 123.9 (2) |
| N2—C3—H3A | 109.3 | N31—C30—H30A | 118.0 |
| C4—C3—H3A | 109.3 | C29—C30—H30A | 118.0 |
| N2—C3—H3B | 109.3 | C30—N31—C32 | 117.1 (2) |
| C4—C3—H3B | 109.3 | N31—C32—C33 | 123.3 (3) |
| H3A—C3—H3B | 108.0 | N31—C32—H32A | 118.4 |
| N1—C4—C3 | 111.2 (2) | C33—C32—H32A | 118.4 |
| N1—C4—H4A | 109.4 | C34—C33—C32 | 119.0 (2) |
| C3—C4—H4A | 109.4 | C34—C33—H33A | 120.5 |
| N1—C4—H4B | 109.4 | C32—C33—H33A | 120.5 |
| C3—C4—H4B | 109.4 | C33—C34—C29 | 119.2 (2) |
| H4A—C4—H4B | 108.0 | C33—C34—H34A | 120.4 |
| N2—C5—H5A | 109.5 | C29—C34—H34A | 120.4 |
| N2—C5—H5B | 109.5 | O21A—N2A—O22A | 123.7 (2) |
| H5A—C5—H5B | 109.5 | O21A—N2A—C2A | 118.4 (2) |
| N2—C5—H5C | 109.5 | O22A—N2A—C2A | 117.9 (2) |
| H5A—C5—H5C | 109.5 | O42A—N4A—O41A | 123.1 (2) |
| H5B—C5—H5C | 109.5 | O42A—N4A—C4A | 118.6 (2) |
| C7—C6—N1 | 112.6 (2) | O41A—N4A—C4A | 118.2 (2) |
| C7—C6—H6A | 109.1 | O61A—N6A—O62A | 122.0 (2) |
| N1—C6—H6A | 109.1 | O61A—N6A—C6A | 118.4 (2) |
| C7—C6—H6B | 109.1 | O62A—N6A—C6A | 119.6 (2) |
| N1—C6—H6B | 109.1 | O1A—C1A—C2A | 121.3 (2) |
| H6A—C6—H6B | 107.8 | O1A—C1A—C6A | 126.9 (2) |
| C12—C7—C8 | 118.6 (3) | C2A—C1A—C6A | 111.7 (2) |
| C12—C7—C6 | 119.2 (2) | C3A—C2A—C1A | 124.6 (2) |
| C8—C7—C6 | 122.2 (2) | C3A—C2A—N2A | 117.3 (2) |
| C9—C8—C7 | 120.4 (2) | C1A—C2A—N2A | 118.0 (2) |
| C9—C8—H8A | 119.8 | C2A—C3A—C4A | 118.7 (2) |
| C7—C8—H8A | 119.8 | C2A—C3A—H3AA | 120.6 |
| C8—C9—C10 | 120.9 (2) | C4A—C3A—H3AA | 120.6 |
| C8—C9—H9A | 119.5 | C5A—C4A—C3A | 121.5 (2) |
| C10—C9—H9A | 119.5 | C5A—C4A—N4A | 119.4 (2) |
| C9—C10—C11 | 118.4 (3) | C3A—C4A—N4A | 119.1 (2) |
| C9—C10—C13 | 119.6 (2) | C4A—C5A—C6A | 118.8 (2) |
| C11—C10—C13 | 122.1 (2) | C4A—C5A—H5AA | 120.6 |
| C12—C11—C10 | 121.2 (2) | C6A—C5A—H5AA | 120.6 |
| C12—C11—H11A | 119.4 | C5A—C6A—C1A | 124.0 (2) |
| C10—C11—H11A | 119.4 | C5A—C6A—N6A | 116.2 (2) |
| C11—C12—C7 | 120.4 (2) | C1A—C6A—N6A | 119.7 (2) |
| C11—C12—H12A | 119.8 | O21B—N2B—O22B | 123.7 (2) |
| C7—C12—H12A | 119.8 | O21B—N2B—C2B | 118.5 (2) |
| O1—C13—N14 | 123.9 (3) | O22B—N2B—C2B | 117.8 (2) |
| O1—C13—C10 | 121.8 (2) | O42B—N4B—O41B | 123.7 (2) |
| N14—C13—C10 | 114.3 (2) | O42B—N4B—C4B | 117.7 (2) |
| C13—N14—C15 | 129.0 (2) | O41B—N4B—C4B | 118.7 (2) |
| C13—N14—H14 | 117 (2) | O61B—N6B—O62B | 122.5 (2) |
| C15—N14—H14 | 113 (2) | O61B—N6B—C6B | 118.1 (2) |
| C21—C15—C16 | 120.2 (2) | O62B—N6B—C6B | 119.4 (2) |
| C21—C15—N14 | 116.1 (2) | O1B—C1B—C6B | 126.3 (2) |
| C16—C15—N14 | 123.6 (2) | O1B—C1B—C2B | 121.7 (2) |
| C17—C16—C15 | 117.5 (2) | C6B—C1B—C2B | 112.0 (2) |
| C17—C16—H16A | 121.2 | C3B—C2B—C1B | 125.1 (2) |
| C15—C16—H16A | 121.2 | C3B—C2B—N2B | 117.4 (2) |
| C18—C17—C16 | 123.6 (2) | C1B—C2B—N2B | 117.6 (2) |
| C18—C17—H17A | 118.2 | C2B—C3B—C4B | 117.9 (2) |
| C16—C17—H17A | 118.2 | C2B—C3B—H3BA | 121.1 |
| C17—C18—C20 | 117.6 (3) | C4B—C3B—H3BA | 121.1 |
| C17—C18—C19 | 120.0 (3) | C5B—C4B—C3B | 122.3 (2) |
| C20—C18—C19 | 122.2 (3) | C5B—C4B—N4B | 118.5 (2) |
| C18—C19—H19A | 109.5 | C3B—C4B—N4B | 119.3 (2) |
| C18—C19—H19B | 109.5 | C4B—C5B—C6B | 118.6 (2) |
| H19A—C19—H19B | 109.5 | C4B—C5B—H5BA | 120.7 |
| C18—C19—H19C | 109.5 | C6B—C5B—H5BA | 120.7 |
| H19A—C19—H19C | 109.5 | C5B—C6B—C1B | 124.1 (2) |
| H19B—C19—H19C | 109.5 | C5B—C6B—N6B | 115.8 (2) |
| C21—C20—C18 | 119.8 (2) | C1B—C6B—N6B | 120.1 (2) |
| C21—C20—N22 | 121.6 (2) | ||
| C4—N1—C1—C2 | 58.2 (2) | C27—C29—C30—N31 | −179.5 (2) |
| C6—N1—C1—C2 | −178.6 (2) | C29—C30—N31—C32 | −2.2 (4) |
| C3—N2—C2—C1 | 53.6 (3) | C30—N31—C32—C33 | −0.4 (4) |
| C5—N2—C2—C1 | 176.8 (2) | N31—C32—C33—C34 | 2.2 (4) |
| N1—C1—C2—N2 | −56.6 (3) | C32—C33—C34—C29 | −1.4 (4) |
| C5—N2—C3—C4 | −177.2 (2) | C30—C29—C34—C33 | −1.0 (4) |
| C2—N2—C3—C4 | −54.0 (3) | C27—C29—C34—C33 | −178.6 (2) |
| C1—N1—C4—C3 | −59.2 (3) | O1A—C1A—C2A—C3A | −170.2 (2) |
| C6—N1—C4—C3 | 177.9 (2) | C6A—C1A—C2A—C3A | 8.4 (4) |
| N2—C3—C4—N1 | 58.1 (3) | O1A—C1A—C2A—N2A | 7.6 (4) |
| C1—N1—C6—C7 | −179.7 (2) | C6A—C1A—C2A—N2A | −173.8 (2) |
| C4—N1—C6—C7 | −58.3 (3) | O21A—N2A—C2A—C3A | −140.1 (2) |
| N1—C6—C7—C12 | 107.2 (3) | O22A—N2A—C2A—C3A | 37.9 (3) |
| N1—C6—C7—C8 | −71.7 (3) | O21A—N2A—C2A—C1A | 41.9 (3) |
| C12—C7—C8—C9 | −0.3 (4) | O22A—N2A—C2A—C1A | −140.1 (2) |
| C6—C7—C8—C9 | 178.6 (2) | C1A—C2A—C3A—C4A | −4.9 (4) |
| C7—C8—C9—C10 | 1.5 (4) | N2A—C2A—C3A—C4A | 177.2 (2) |
| C8—C9—C10—C11 | −1.3 (4) | C2A—C3A—C4A—C5A | −1.6 (4) |
| C8—C9—C10—C13 | −179.5 (2) | C2A—C3A—C4A—N4A | 178.2 (2) |
| C9—C10—C11—C12 | 0.0 (4) | O42A—N4A—C4A—C5A | 1.1 (4) |
| C13—C10—C11—C12 | 178.1 (2) | O41A—N4A—C4A—C5A | 179.9 (2) |
| C10—C11—C12—C7 | 1.2 (4) | O42A—N4A—C4A—C3A | −178.7 (3) |
| C8—C7—C12—C11 | −1.0 (4) | O41A—N4A—C4A—C3A | 0.1 (4) |
| C6—C7—C12—C11 | −180.0 (2) | C3A—C4A—C5A—C6A | 3.7 (4) |
| C9—C10—C13—O1 | 23.7 (4) | N4A—C4A—C5A—C6A | −176.1 (2) |
| C11—C10—C13—O1 | −154.5 (3) | C4A—C5A—C6A—C1A | 0.5 (4) |
| C9—C10—C13—N14 | −156.9 (2) | C4A—C5A—C6A—N6A | 178.8 (2) |
| C11—C10—C13—N14 | 25.0 (4) | O1A—C1A—C6A—C5A | 172.4 (2) |
| O1—C13—N14—C15 | 8.6 (4) | C2A—C1A—C6A—C5A | −6.1 (3) |
| C10—C13—N14—C15 | −170.8 (2) | O1A—C1A—C6A—N6A | −5.8 (4) |
| C13—N14—C15—C21 | −160.7 (3) | C2A—C1A—C6A—N6A | 175.8 (2) |
| C13—N14—C15—C16 | 23.3 (4) | O61A—N6A—C6A—C5A | 15.5 (4) |
| C21—C15—C16—C17 | −2.5 (4) | O62A—N6A—C6A—C5A | −164.3 (2) |
| N14—C15—C16—C17 | 173.3 (3) | O61A—N6A—C6A—C1A | −166.2 (3) |
| C15—C16—C17—C18 | −0.2 (4) | O62A—N6A—C6A—C1A | 14.0 (4) |
| C16—C17—C18—C20 | 2.9 (4) | O1B—C1B—C2B—C3B | 176.0 (3) |
| C16—C17—C18—C19 | −173.3 (3) | C6B—C1B—C2B—C3B | −4.2 (4) |
| C17—C18—C20—C21 | −3.0 (4) | O1B—C1B—C2B—N2B | −2.9 (4) |
| C19—C18—C20—C21 | 173.1 (3) | C6B—C1B—C2B—N2B | 176.9 (2) |
| C17—C18—C20—N22 | −178.2 (2) | O21B—N2B—C2B—C3B | 132.4 (3) |
| C19—C18—C20—N22 | −2.1 (4) | O22B—N2B—C2B—C3B | −46.8 (4) |
| C16—C15—C21—C20 | 2.4 (4) | O21B—N2B—C2B—C1B | −48.7 (3) |
| N14—C15—C21—C20 | −173.7 (2) | O22B—N2B—C2B—C1B | 132.2 (3) |
| C18—C20—C21—C15 | 0.4 (4) | C1B—C2B—C3B—C4B | 2.8 (4) |
| N22—C20—C21—C15 | 175.5 (2) | N2B—C2B—C3B—C4B | −178.3 (2) |
| C21—C20—N22—C23 | 17.2 (4) | C2B—C3B—C4B—C5B | 0.2 (4) |
| C18—C20—N22—C23 | −167.7 (3) | C2B—C3B—C4B—N4B | −180.0 (2) |
| C20—N22—C23—N28 | 18.2 (4) | O42B—N4B—C4B—C5B | −3.4 (4) |
| C20—N22—C23—N24 | −162.5 (2) | O41B—N4B—C4B—C5B | 176.1 (2) |
| N28—C23—N24—C25 | −0.6 (4) | O42B—N4B—C4B—C3B | 176.7 (2) |
| N22—C23—N24—C25 | −179.8 (2) | O41B—N4B—C4B—C3B | −3.7 (4) |
| C23—N24—C25—C26 | −1.0 (4) | C3B—C4B—C5B—C6B | −1.3 (4) |
| N24—C25—C26—C27 | 1.0 (4) | N4B—C4B—C5B—C6B | 178.9 (2) |
| C25—C26—C27—N28 | 0.6 (4) | C4B—C5B—C6B—C1B | −0.5 (4) |
| C25—C26—C27—C29 | −178.6 (2) | C4B—C5B—C6B—N6B | 178.3 (2) |
| N24—C23—N28—C27 | 2.1 (4) | O1B—C1B—C6B—C5B | −177.2 (3) |
| N22—C23—N28—C27 | −178.7 (2) | C2B—C1B—C6B—C5B | 3.0 (4) |
| C26—C27—N28—C23 | −2.0 (4) | O1B—C1B—C6B—N6B | 4.1 (4) |
| C29—C27—N28—C23 | 177.2 (2) | C2B—C1B—C6B—N6B | −175.7 (2) |
| N28—C27—C29—C30 | −166.7 (2) | O61B—N6B—C6B—C5B | −25.5 (3) |
| C26—C27—C29—C30 | 12.6 (4) | O62B—N6B—C6B—C5B | 153.6 (2) |
| N28—C27—C29—C34 | 10.8 (4) | O61B—N6B—C6B—C1B | 153.3 (2) |
| C26—C27—C29—C34 | −170.0 (3) | O62B—N6B—C6B—C1B | −27.6 (4) |
| C34—C29—C30—N31 | 3.0 (4) |
| H··· | ||||
| N1—H1···O1B | 0.85 (3) | 1.85 (3) | 2.658 (3) | 157 (3) |
| N1—H1···O62B | 0.85 (3) | 2.35 (3) | 2.890 (3) | 122 (2) |
| N2—H2···O1A | 0.89 (4) | 1.85 (4) | 2.678 (3) | 154 (3) |
| N2—H2···O62A | 0.89 (4) | 2.41 (4) | 3.009 (3) | 125 (3) |
| N14—H14···N31i | 0.85 (3) | 2.23 (3) | 3.069 (3) | 171 (3) |
| C5—H5B···O41Aii | 0.98 | 2.48 | 3.258 (4) | 136 |
| C4—H4B···O42Biii | 0.99 | 2.33 | 3.199 (3) | 146 |
| C3—H3A···O61Biv | 0.99 | 2.57 | 3.199 (3) | 121 |
| C3—H3B···O1B | 0.99 | 2.34 | 3.072 (3) | 130 |
| C12—H12A···O42Biii | 0.95 | 2.63 | 3.423 (3) | 142 |
| C19—H19A···O61Bv | 0.98 | 2.50 | 3.435 (4) | 159 |
| C19—H19A···N6Bv | 0.98 | 2.65 | 3.541 (4) | 152 |
| H··· | ||||
| C33—H33 | 0.95 | 2.90 | 3.545 (8) | 127 |
| 3.740 (4) | |
| 3.496 (7) | |
| 3.396 (0) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯O1 | 0.85 (3) | 1.85 (3) | 2.658 (3) | 157 (3) |
| N1—H1⋯O62 | 0.85 (3) | 2.35 (3) | 2.890 (3) | 122 (2) |
| N2—H2⋯O1 | 0.89 (4) | 1.85 (4) | 2.678 (3) | 154 (3) |
| N2—H2⋯O62 | 0.89 (4) | 2.41 (4) | 3.009 (3) | 125 (3) |
| N14—H14⋯N31i | 0.85 (3) | 2.23 (3) | 3.069 (3) | 171 (3) |
| C5—H5 | 0.98 | 2.48 | 3.258 (4) | 136 |
| C4—H4 | 0.99 | 2.33 | 3.199 (3) | 146 |
| C3—H3 | 0.99 | 2.57 | 3.199 (3) | 121 |
| C3—H3 | 0.99 | 2.34 | 3.072 (3) | 130 |
| C12—H12 | 0.95 | 2.63 | 3.423 (3) | 142 |
| C19—H19 | 0.98 | 2.50 | 3.435 (4) | 159 |
| C19—H19 | 0.98 | 2.65 | 3.541 (4) | 152 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .
π-Ring hydrogen-bond geometry (Å, °) for (I)
| H⋯ | ||||
|---|---|---|---|---|
| C33—H33 | 0.95 | 2.90 | 3.545 (8) | 127 |
Symmetry code: (vi) x + 1, y, z. Cg5 is the centroid of the C15–C21 ring.
π–π stacking geometry (Å) for (I)
| 3.740 (4) | |
| 3.496 (7) | |
| 3.396 (0) |
Symmetry codes: (v) −x + 1, −y + 1, −z + 1; (vii) −x + 2, −y + 2, −z. Cg2, Cg3, Cg6 and Cg7 are the centroids of the C25–C27/N28/C23/N4, C32–C34/C29//C30/N31, C1A–C6A and C1B–C6B rings, respectively.