| Literature DB >> 21579807 |
B Thimme Gowda, Sabine Foro, P A Suchetan, Hartmut Fuess.
Abstract
In the title compound, C(8)H(5)Br(3)ClNO, the conformation of the N-H bond isEntities:
Year: 2010 PMID: 21579807 PMCID: PMC2979848 DOI: 10.1107/S1600536810001467
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C8H5Br3ClNO | |
| Orthorhombic, | Mo |
| Hall symbol: P 2c -2n | Cell parameters from 3507 reflections |
| θ = 2.7–27.8° | |
| µ = 10.86 mm−1 | |
| Rod, colourless | |
| 0.40 × 0.40 × 0.34 mm |
| Oxford Diffraction Xcalibur diffractometer with a Sapphire CCD detector | 1645 independent reflections |
| Radiation source: fine-focus sealed tube | 1491 reflections with |
| graphite | |
| Rotation method data acquisition using ω and φ scans. | θmax = 26.4°, θmin = 2.7° |
| Absorption correction: multi-scan ( | |
| 4524 measured reflections |
| Refinement on | Hydrogen site location: inferred from neighbouring sites |
| Least-squares matrix: full | H atoms treated by a mixture of independent and constrained refinement |
| (Δ/σ)max = 0.004 | |
| Δρmax = 0.77 e Å−3 | |
| 1645 reflections | Δρmin = −0.56 e Å−3 |
| 131 parameters | Extinction correction: |
| 2 restraints | Extinction coefficient: 0.0072 (5) |
| Primary atom site location: structure-invariant direct methods | Absolute structure: Flack (1983), 416 Friedel pairs |
| Secondary atom site location: difference Fourier map | Flack parameter: 0.049 (18) |
| Experimental. CrysAlis RED (Oxford Diffraction, 2009) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Br1 | 0.56049 (8) | 0.28366 (5) | 1.15778 (8) | 0.0510 (2) | |
| Br2 | 0.43394 (7) | 0.06152 (5) | 1.19542 (7) | 0.0483 (2) | |
| Br3 | 0.70743 (6) | 0.09279 (5) | 1.00260 (9) | 0.0474 (2) | |
| Cl1 | 0.5017 (2) | 0.46215 (12) | 0.7770 (2) | 0.0536 (5) | |
| O1 | 0.3140 (5) | 0.1287 (4) | 0.9233 (5) | 0.0521 (13) | |
| N1 | 0.4832 (5) | 0.2390 (4) | 0.8407 (6) | 0.0366 (12) | |
| H1N | 0.554 (5) | 0.277 (4) | 0.866 (9) | 0.044* | |
| C1 | 0.4101 (6) | 0.2689 (4) | 0.7164 (7) | 0.0311 (12) | |
| C2 | 0.4114 (6) | 0.3709 (4) | 0.6763 (7) | 0.0360 (14) | |
| C3 | 0.3435 (8) | 0.4026 (5) | 0.5526 (7) | 0.0475 (17) | |
| H3 | 0.3476 | 0.4712 | 0.5244 | 0.057* | |
| C4 | 0.2701 (8) | 0.3305 (6) | 0.4724 (8) | 0.0573 (19) | |
| H4 | 0.2235 | 0.3506 | 0.3901 | 0.069* | |
| C5 | 0.2660 (9) | 0.2308 (6) | 0.5136 (9) | 0.063 (2) | |
| H5 | 0.2152 | 0.1829 | 0.4598 | 0.076* | |
| C6 | 0.3362 (8) | 0.1987 (5) | 0.6347 (7) | 0.0471 (17) | |
| H6 | 0.3335 | 0.1296 | 0.6607 | 0.057* | |
| C7 | 0.4282 (6) | 0.1716 (4) | 0.9346 (6) | 0.0278 (12) | |
| C8 | 0.5253 (6) | 0.1542 (4) | 1.0638 (7) | 0.0288 (12) |
| Br1 | 0.0744 (5) | 0.0373 (3) | 0.0411 (4) | −0.0059 (3) | −0.0169 (4) | −0.0036 (3) |
| Br2 | 0.0476 (4) | 0.0509 (4) | 0.0464 (4) | −0.0058 (3) | 0.0000 (3) | 0.0248 (3) |
| Br3 | 0.0328 (3) | 0.0471 (4) | 0.0623 (5) | 0.0097 (3) | 0.0018 (3) | 0.0139 (4) |
| Cl1 | 0.0620 (10) | 0.0384 (8) | 0.0604 (12) | −0.0142 (8) | −0.0155 (9) | 0.0153 (8) |
| O1 | 0.047 (3) | 0.067 (3) | 0.043 (3) | −0.025 (2) | −0.009 (2) | 0.011 (3) |
| N1 | 0.040 (3) | 0.035 (3) | 0.035 (3) | −0.007 (2) | −0.008 (2) | 0.013 (3) |
| C1 | 0.035 (3) | 0.032 (3) | 0.026 (3) | 0.008 (2) | 0.000 (2) | 0.004 (2) |
| C2 | 0.032 (3) | 0.036 (3) | 0.040 (4) | 0.004 (2) | 0.004 (3) | 0.004 (3) |
| C3 | 0.057 (4) | 0.052 (4) | 0.033 (4) | 0.018 (3) | 0.004 (3) | 0.018 (3) |
| C4 | 0.074 (5) | 0.070 (5) | 0.028 (4) | 0.010 (4) | −0.017 (4) | 0.012 (4) |
| C5 | 0.092 (5) | 0.065 (5) | 0.033 (4) | 0.011 (4) | −0.020 (4) | −0.016 (4) |
| C6 | 0.068 (4) | 0.039 (3) | 0.034 (4) | 0.011 (3) | −0.005 (4) | −0.002 (3) |
| C7 | 0.028 (3) | 0.027 (3) | 0.029 (3) | 0.002 (2) | 0.000 (2) | 0.000 (2) |
| C8 | 0.032 (3) | 0.027 (3) | 0.027 (3) | 0.001 (2) | −0.001 (2) | 0.008 (2) |
| Br1—C8 | 1.929 (6) | C2—C3 | 1.395 (9) |
| Br2—C8 | 1.929 (6) | C3—C4 | 1.383 (10) |
| Br3—C8 | 1.944 (6) | C3—H3 | 0.9300 |
| Cl1—C2 | 1.735 (7) | C4—C5 | 1.351 (11) |
| O1—C7 | 1.193 (6) | C4—H4 | 0.9300 |
| N1—C7 | 1.349 (7) | C5—C6 | 1.385 (10) |
| N1—C1 | 1.415 (8) | C5—H5 | 0.9300 |
| N1—H1N | 0.85 (3) | C6—H6 | 0.9300 |
| C1—C6 | 1.377 (9) | C7—C8 | 1.537 (8) |
| C1—C2 | 1.376 (8) | ||
| C7—N1—C1 | 123.6 (5) | C4—C5—C6 | 121.1 (7) |
| C7—N1—H1N | 118 (6) | C4—C5—H5 | 119.5 |
| C1—N1—H1N | 116 (5) | C6—C5—H5 | 119.5 |
| C6—C1—C2 | 118.8 (6) | C1—C6—C5 | 120.1 (6) |
| C6—C1—N1 | 121.7 (5) | C1—C6—H6 | 119.9 |
| C2—C1—N1 | 119.4 (6) | C5—C6—H6 | 119.9 |
| C1—C2—C3 | 120.9 (6) | O1—C7—N1 | 124.9 (6) |
| C1—C2—Cl1 | 120.4 (5) | O1—C7—C8 | 121.0 (5) |
| C3—C2—Cl1 | 118.7 (5) | N1—C7—C8 | 114.1 (4) |
| C4—C3—C2 | 119.0 (6) | C7—C8—Br1 | 110.0 (4) |
| C4—C3—H3 | 120.5 | C7—C8—Br2 | 111.0 (4) |
| C2—C3—H3 | 120.5 | Br1—C8—Br2 | 108.3 (3) |
| C5—C4—C3 | 120.0 (6) | C7—C8—Br3 | 108.7 (4) |
| C5—C4—H4 | 120.0 | Br1—C8—Br3 | 110.5 (3) |
| C3—C4—H4 | 120.0 | Br2—C8—Br3 | 108.3 (3) |
| C7—N1—C1—C6 | −41.6 (9) | N1—C1—C6—C5 | −179.9 (6) |
| C7—N1—C1—C2 | 137.9 (6) | C4—C5—C6—C1 | 0.9 (12) |
| C6—C1—C2—C3 | −2.1 (9) | C1—N1—C7—O1 | 1.1 (9) |
| N1—C1—C2—C3 | 178.4 (6) | C1—N1—C7—C8 | −177.9 (5) |
| C6—C1—C2—Cl1 | 179.4 (5) | O1—C7—C8—Br1 | −121.3 (5) |
| N1—C1—C2—Cl1 | −0.1 (8) | N1—C7—C8—Br1 | 57.7 (6) |
| C1—C2—C3—C4 | 2.2 (10) | O1—C7—C8—Br2 | −1.5 (7) |
| Cl1—C2—C3—C4 | −179.4 (5) | N1—C7—C8—Br2 | 177.5 (4) |
| C2—C3—C4—C5 | −0.7 (11) | O1—C7—C8—Br3 | 117.5 (5) |
| C3—C4—C5—C6 | −0.9 (12) | N1—C7—C8—Br3 | −63.4 (5) |
| C2—C1—C6—C5 | 0.6 (10) |
| H··· | ||||
| N1—H1N···Br1 | 0.85 (3) | 2.78 (8) | 3.155 (6) | 109 (6) |
| N1—H1N···Cl1 | 0.85 (3) | 2.59 (7) | 2.961 (5) | 107 (5) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.85 (3) | 2.78 (8) | 3.155 (6) | 109 (6) |
| N1—H1 | 0.85 (3) | 2.59 (7) | 2.961 (5) | 107 (5) |