Literature DB >> 21579805

1-(1,3-Benzodioxol-5-yl)ethanone.

Jerry P Jasinski, Ray J Butcher, Q N M Hakim Al-Arique, H S Yathirajan, B Narayana.   

Abstract

In the title compound, C(9)H(8)O(3), the dihedral angle between the mean planes of the benzene and dioxole rings is 1.4 (8)°, with the dioxole group in a slightly distorted envelope configuration with the flap C atom displaced by 0.0645 Å from the plane through the other four atoms. In the crystal, weak inter-molecular C-H⋯O hydrogen-bond inter-actions link the mol-ecules into chains propagating in [011]. The crystal packing exhibits weak π-π inter-actions as evidenced by the relatively short distances [3.801 (9) Å] between the centroids of adjacent benzene rings.

Entities:  

Year:  2010        PMID: 21579805      PMCID: PMC2979689          DOI: 10.1107/S1600536810001352

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the pharmaceutical properties of compounds containing the 1,3-dioxolyl group, see: Gabrielsen et al. (1992 ▶); Krause & Goeber (1972 ▶); Ma et al. (1987a ▶,b ▶); Ohta & Kimoto (1976 ▶); For bond-length data, see: Allen et al. (1987 ▶). For related structures, see: Jasinski et al. (2008 ▶); Yathirajan et al. (2007 ▶). For puckering parameters, see: Cremer & Pople (1975 ▶). For MOPAC AM1 calculations, see: Schmidt & Polik (2007 ▶).

Experimental

Crystal data

C9H8O3 M = 164.15 Monoclinic, a = 9.4697 (3) Å b = 10.8445 (3) Å c = 7.5148 (3) Å β = 105.973 (3)° V = 741.93 (4) Å3 Z = 4 Mo Kα radiation μ = 0.11 mm−1 T = 200 K 0.58 × 0.45 × 0.26 mm

Data collection

Oxford Diffraction R Gemini diffractometer Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2007 ▶) T min = 0.909, T max = 0.972 12470 measured reflections 3061 independent reflections 2215 reflections with I > 2σ(I) R int = 0.024

Refinement

R[F 2 > 2σ(F 2)] = 0.045 wR(F 2) = 0.133 S = 1.03 3061 reflections 110 parameters H-atom parameters constrained Δρmax = 0.39 e Å−3 Δρmin = −0.28 e Å−3 Data collection: CrysAlis PRO (Oxford Diffraction, 2007 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810001352/im2174sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810001352/im2174Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C9H8O3F(000) = 344
Mr = 164.15Dx = 1.470 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 5168 reflections
a = 9.4697 (3) Åθ = 4.8–34.7°
b = 10.8445 (3) ŵ = 0.11 mm1
c = 7.5148 (3) ÅT = 200 K
β = 105.973 (3)°Irregular plate, colorless
V = 741.93 (4) Å30.58 × 0.45 × 0.26 mm
Z = 4
Oxford Diffraction R Gemini diffractometer3061 independent reflections
Radiation source: fine-focus sealed tube2215 reflections with I > 2σ(I)
graphiteRint = 0.024
Detector resolution: 10.5081 pixels mm-1θmax = 34.8°, θmin = 4.9°
φ and ω scansh = −14→14
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2007)k = −17→15
Tmin = 0.909, Tmax = 0.972l = −11→11
12470 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.045Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.133H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0852P)2] where P = (Fo2 + 2Fc2)/3
3061 reflections(Δ/σ)max < 0.001
110 parametersΔρmax = 0.39 e Å3
0 restraintsΔρmin = −0.28 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.19844 (7)0.26081 (7)0.45409 (11)0.03260 (19)
O20.12787 (7)0.42705 (7)0.60401 (10)0.02944 (17)
O30.76739 (8)0.26971 (7)0.62415 (11)0.03273 (18)
C10.07627 (10)0.31692 (10)0.50175 (15)0.0315 (2)
H1A−0.00230.33700.38820.038*
H1B0.03570.25960.57770.038*
C20.27739 (9)0.42276 (8)0.64441 (11)0.02067 (17)
C30.37564 (9)0.50450 (8)0.74958 (12)0.02310 (18)
H3A0.34480.57320.80790.028*
C40.52406 (9)0.48140 (8)0.76650 (12)0.02156 (17)
H4A0.59600.53530.83970.026*
C50.56965 (8)0.38161 (8)0.67914 (11)0.01868 (16)
C60.46499 (9)0.30025 (8)0.56785 (12)0.02042 (17)
H6A0.49360.23290.50480.024*
C70.32064 (9)0.32334 (8)0.55556 (11)0.02051 (17)
C80.72805 (9)0.35800 (8)0.70045 (12)0.02201 (18)
C90.84055 (10)0.44275 (10)0.82066 (14)0.0293 (2)
H9A0.93730.42500.80320.044*
H9B0.84360.42980.95070.044*
H9C0.81390.52860.78630.044*
U11U22U33U12U13U23
O10.0185 (3)0.0348 (4)0.0419 (4)−0.0031 (3)0.0041 (3)−0.0136 (3)
O20.0162 (3)0.0337 (4)0.0373 (4)0.0036 (2)0.0055 (3)−0.0046 (3)
O30.0236 (3)0.0311 (4)0.0461 (4)0.0029 (3)0.0140 (3)−0.0052 (3)
C10.0180 (4)0.0394 (5)0.0362 (5)−0.0029 (4)0.0061 (4)−0.0063 (4)
C20.0166 (3)0.0237 (4)0.0217 (4)0.0032 (3)0.0054 (3)0.0019 (3)
C30.0227 (4)0.0221 (4)0.0248 (4)0.0030 (3)0.0071 (3)−0.0028 (3)
C40.0204 (4)0.0209 (4)0.0227 (4)−0.0010 (3)0.0048 (3)−0.0013 (3)
C50.0172 (3)0.0191 (4)0.0201 (4)0.0006 (3)0.0056 (3)0.0024 (3)
C60.0203 (4)0.0188 (4)0.0230 (4)0.0013 (3)0.0075 (3)−0.0009 (3)
C70.0178 (3)0.0210 (4)0.0217 (4)−0.0014 (3)0.0036 (3)−0.0005 (3)
C80.0186 (3)0.0227 (4)0.0261 (4)0.0004 (3)0.0084 (3)0.0039 (3)
C90.0186 (4)0.0328 (5)0.0353 (5)−0.0031 (3)0.0056 (3)−0.0003 (4)
O1—C71.3765 (10)C4—C51.3945 (12)
O1—C11.4370 (12)C4—H4A0.9500
O2—C21.3648 (10)C5—C61.4157 (11)
O2—C11.4314 (12)C5—C81.4862 (11)
O3—C81.2256 (11)C6—C71.3676 (11)
C1—H1A0.9900C6—H6A0.9500
C1—H1B0.9900C8—C91.5053 (12)
C2—C31.3679 (12)C9—H9A0.9800
C2—C71.3879 (12)C9—H9B0.9800
C3—C41.3985 (11)C9—H9C0.9800
C3—H3A0.9500
C7—O1—C1105.37 (7)C4—C5—C8121.13 (7)
C2—O2—C1105.72 (7)C6—C5—C8118.56 (7)
O2—C1—O1107.93 (7)C7—C6—C5116.75 (8)
O2—C1—H1A110.1C7—C6—H6A121.6
O1—C1—H1A110.1C5—C6—H6A121.6
O2—C1—H1B110.1C6—C7—O1128.28 (8)
O1—C1—H1B110.1C6—C7—C2122.11 (8)
H1A—C1—H1B108.4O1—C7—C2109.56 (7)
O2—C2—C3127.26 (8)O3—C8—C5120.79 (8)
O2—C2—C7110.18 (7)O3—C8—C9120.11 (8)
C3—C2—C7122.51 (8)C5—C8—C9119.09 (8)
C2—C3—C4116.31 (8)C8—C9—H9A109.5
C2—C3—H3A121.8C8—C9—H9B109.5
C4—C3—H3A121.8H9A—C9—H9B109.5
C5—C4—C3121.99 (8)C8—C9—H9C109.5
C5—C4—H4A119.0H9A—C9—H9C109.5
C3—C4—H4A119.0H9B—C9—H9C109.5
C4—C5—C6120.31 (7)
C2—O2—C1—O1−10.84 (10)C5—C6—C7—C21.19 (13)
C7—O1—C1—O210.94 (10)C1—O1—C7—C6175.70 (9)
C1—O2—C2—C3−175.94 (9)C1—O1—C7—C2−6.94 (10)
C1—O2—C2—C76.63 (10)O2—C2—C7—C6177.78 (8)
O2—C2—C3—C4−178.36 (8)C3—C2—C7—C60.21 (14)
C7—C2—C3—C4−1.22 (13)O2—C2—C7—O10.22 (10)
C2—C3—C4—C50.83 (13)C3—C2—C7—O1−177.35 (8)
C3—C4—C5—C60.55 (13)C4—C5—C8—O3179.58 (8)
C3—C4—C5—C8−179.39 (8)C6—C5—C8—O3−0.36 (12)
C4—C5—C6—C7−1.54 (12)C4—C5—C8—C90.81 (12)
C8—C5—C6—C7178.40 (7)C6—C5—C8—C9−179.12 (8)
C5—C6—C7—O1178.26 (8)
D—H···AD—HH···AD···AD—H···A
C3—H3A···O3i0.952.503.423 (1)165
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C3—H3A⋯O3i0.952.503.423 (1)165

Symmetry code: (i) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  [Spasmolytic effects of tetrahydroisoquinoline derivatives].

Authors:  W Krause; B Göber
Journal:  Pharmazie       Date:  1972-06       Impact factor: 1.267

3.  Antiviral (RNA) activity of selected Amaryllidaceae isoquinoline constituents and synthesis of related substances.

Authors:  B Gabrielsen; T P Monath; J W Huggins; D F Kefauver; G R Pettit; G Groszek; M Hollingshead; J J Kirsi; W M Shannon; E M Schubert
Journal:  J Nat Prod       Date:  1992-11       Impact factor: 4.050

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.