Literature DB >> 21579799

1-Bromo-methyl-4-aza-1-azoniabicyclo-[2.2.2]octane bromide.

Aaron D Finke, Danielle L Gray, Jeffrey S Moore.   

Abstract

The title compound, C(7)H(14)BrN(2) (+)·Br(-), was prepared by nucleophilic substitution of DABCO (systematic name: 1,4-diaza-bicyclo-[2.2.2]octa-ne) with dibromo-methane in acetone. The structure features Br⋯H close contacts (2.79 and 2.90 Å) as well as a weak bromine-bromide inter-action [3.6625 (6) Å].

Entities:  

Year:  2010        PMID: 21579799      PMCID: PMC2979768          DOI: 10.1107/S1600536810000292

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For use of DABCO as an organocatalyst, see Basaviah et al. (2003 ▶). For related haloalkyl­ations of DABCO, see: Almarzoqi et al. (1986 ▶); Fronczek et al. (1990 ▶); Gustafsson et al. (2005 ▶); Banks et al. (1993 ▶); Batsanov et al. (2005 ▶); Fletcher Claville et al. (2007 ▶). For inversion twinning, see: Flack & Bernardinelli (2000 ▶).

Experimental

Crystal data

C7H14BrN2Br M = 286.02 Orthorhombic, a = 7.1100 (3) Å b = 11.8085 (5) Å c = 11.7702 (5) Å V = 988.21 (7) Å3 Z = 4 Mo Kα radiation μ = 8.15 mm−1 T = 193 K 0.36 × 0.35 × 0.06 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: integration [SHELXTL (Sheldrick, 2008 ▶) and XPREP (Bruker, 2005 ▶)] T min = 0.151, T max = 0.744 7347 measured reflections 991 independent reflections 954 reflections with I > 2σ(I) R int = 0.050

Refinement

R[F 2 > 2σ(F 2)] = 0.022 wR(F 2) = 0.052 S = 1.10 991 reflections 61 parameters 1 restraint H-atom parameters constrained Δρmax = 0.42 e Å−3 Δρmin = −0.44 e Å−3 Absolute structure: Flack (1983 ▶), 468 Friedel pairs Flack parameter: −0.004 (17) Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT and XPREP (Bruker, 2005 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶) and CrystalMaker (CrystalMaker, 1994 ▶); software used to prepare material for publication: XCIF (Bruker, 2005 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810000292/pk2223sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810000292/pk2223Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C7H14BrN2+·BrF(000) = 560
Mr = 286.02Dx = 1.922 Mg m3
Orthorhombic, Cmc21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: C 2c -2Cell parameters from 3160 reflections
a = 7.1100 (3) Åθ = 3.3–26.3°
b = 11.8085 (5) ŵ = 8.15 mm1
c = 11.7702 (5) ÅT = 193 K
V = 988.21 (7) Å3Plate, colourless
Z = 40.36 × 0.35 × 0.06 mm
Bruker Kappa APEXII CCD diffractometer991 independent reflections
Radiation source: fine-focus sealed tube954 reflections with I > 2σ(I)
graphiteRint = 0.050
φ and ω scansθmax = 25.4°, θmin = 3.3°
Absorption correction: integration (SHELXTL and XPREP; Bruker, 2005)h = −8→8
Tmin = 0.151, Tmax = 0.744k = −14→14
7347 measured reflectionsl = −14→14
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.022H-atom parameters constrained
wR(F2) = 0.052w = 1/[σ2(Fo2) + (0.0248P)2] where P = (Fo2 + 2Fc2)/3
S = 1.10(Δ/σ)max < 0.001
991 reflectionsΔρmax = 0.42 e Å3
61 parametersΔρmin = −0.44 e Å3
1 restraintAbsolute structure: Flack (1983), 468 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: −0.004 (17)
Experimental. One distinct cell was identified using APEX2 (Bruker, 2004). Seven frame series were integrated and filtered for statistical outliers using SAINT (Bruker, 2005) then corrected for absorption by integration using SHELXTL/XPREP V2005/2 (Bruker, 2005) before using SAINT/SADABS (Bruker, 2005) to sort, merge, and scale the combined data. No decay correction was applied.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Structure was phased by direct methods (Sheldrick, 2008). Systematic conditions suggested the ambiguous space group. The space group choice was confirmed by successful convergence of the full-matrix least-squares refinement on F2. The highest peaks in the final difference Fourier map were in the vicinity of atoms Br1 and Br2; the final map had no other significant features. A final analysis of variance between observed and calculated structure factors showed some dependence on amplitude and resolution.
xyzUiso*/UeqOcc. (<1)
Br10.50000.14054 (4)−0.05638 (4)0.03174 (19)
Br20.00000.65245 (4)0.34152 (3)0.02920 (17)
N10.50000.5040 (4)0.1977 (4)0.0281 (9)
N20.50000.3707 (3)0.0253 (3)0.0188 (8)
C10.50000.5692 (5)0.0917 (5)0.0360 (13)
H1A0.61260.61850.08980.043*0.50
H1B0.38740.61850.08980.043*0.50
C20.50000.4932 (4)−0.0128 (4)0.0291 (12)
H2A0.38710.5086−0.05950.035*0.50
H2B0.61290.5086−0.05950.035*0.50
C30.3326 (5)0.4320 (3)0.1979 (3)0.0369 (9)
H3A0.21890.48040.19600.044*
H3B0.32940.38750.26910.044*
C40.3283 (5)0.3507 (3)0.0964 (3)0.0264 (8)
H4A0.32630.27140.12360.032*
H4B0.21370.36400.05060.032*
C50.50000.3026 (4)−0.0825 (4)0.0234 (10)
H5A0.61250.3229−0.12780.028*0.50
H5B0.38750.3229−0.12780.028*0.50
U11U22U33U12U13U23
Br10.0285 (4)0.0282 (3)0.0385 (4)0.0000.000−0.0120 (3)
Br20.0230 (3)0.0325 (3)0.0321 (4)0.0000.0000.0042 (3)
N10.037 (2)0.027 (2)0.021 (2)0.0000.000−0.0071 (18)
N20.021 (2)0.023 (2)0.013 (2)0.0000.000−0.0006 (16)
C10.046 (3)0.024 (3)0.038 (3)0.0000.000−0.005 (2)
C20.042 (3)0.023 (3)0.022 (3)0.0000.0000.006 (2)
C30.039 (2)0.037 (2)0.034 (2)−0.0058 (18)0.0135 (16)−0.0103 (18)
C40.0189 (18)0.035 (2)0.0254 (17)−0.0029 (15)0.0062 (12)−0.0040 (13)
C50.032 (3)0.025 (2)0.013 (2)0.0000.000−0.0048 (18)
Br1—C51.938 (5)C3—C41.532 (4)
N1—C3i1.463 (4)C3—H3A0.9900
N1—C31.464 (4)C3—H3B0.9900
N1—C11.466 (6)C4—H4A0.9900
N2—C41.499 (4)C4—H4B0.9900
N2—C4i1.499 (4)C5—H5A0.9900
N2—C51.502 (6)C5—H5B0.9900
N2—C21.514 (6)Br1—Br2ii3.6625 (6)
C1—C21.522 (7)Br2—H5Aiii2.79
C1—H1A0.9900Br2—H5Biv2.79
C1—H1B0.9900Br2—H4Bv2.90
C2—H2A0.9900Br2—H4Biv2.90
C2—H2B0.9900
C3i—N1—C3108.9 (4)H2A—C2—H2B108.3
C3i—N1—C1107.8 (3)N1—C3—C4112.3 (3)
C3—N1—C1107.8 (3)N1—C3—H3A109.1
C4—N2—C4i109.1 (4)C4—C3—H3A109.1
C4—N2—C5112.8 (2)N1—C3—H3B109.1
C4i—N2—C5112.8 (2)C4—C3—H3B109.1
C4—N2—C2108.4 (2)H3A—C3—H3B107.9
C4i—N2—C2108.4 (2)N2—C4—C3108.7 (3)
C5—N2—C2105.2 (3)N2—C4—H4A109.9
N1—C1—C2112.2 (4)C3—C4—H4A109.9
N1—C1—H1A109.2N2—C4—H4B109.9
C2—C1—H1A109.2C3—C4—H4B109.9
N1—C1—H1B109.2H4A—C4—H4B108.3
C2—C1—H1B109.2N2—C5—Br1113.2 (3)
H1A—C1—H1B107.9N2—C5—H5A108.9
N2—C2—C1108.9 (4)Br1—C5—H5A108.9
N2—C2—H2A109.9N2—C5—H5B108.9
C1—C2—H2A109.9Br1—C5—H5B108.9
N2—C2—H2B109.9H5A—C5—H5B107.7
C1—C2—H2B109.9
C3i—N1—C1—C258.7 (2)C4i—N2—C4—C359.3 (4)
C3—N1—C1—C2−58.7 (2)C5—N2—C4—C3−174.6 (3)
C4—N2—C2—C159.1 (2)C2—N2—C4—C3−58.6 (3)
C4i—N2—C2—C1−59.1 (2)N1—C3—C4—N2−0.5 (4)
C5—N2—C2—C1180.0C4—N2—C5—Br1−62.1 (2)
N1—C1—C2—N20.0C4i—N2—C5—Br162.1 (2)
C3i—N1—C3—C4−57.5 (5)C2—N2—C5—Br1180.0
C1—N1—C3—C459.2 (4)
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