Literature DB >> 21579678

Poly[(μ(2)-3,6-di-4-pyridyl-1,2,4,5-tetra-zine)(μ(2)-thio-cyanato)copper(I)].

Yiming Wu, Qinglong Meng, Chi Zhang.   

Abstract

The title compound, [Cu(NCS)(C(12)H(8)N(6))](n), is a self-assembled two-dimensional metal-organic network. The Cu atom is linked by two N atoms from two 3,6-di-4-pyridyl-1,2,4,5-tetra-zine ligands and by the N and S atoms from two thio-cyanate ligands in a distorted tetra-hedral environment. The Cu atom and the thio-cyanate ligand occupy a crystallographic mirror plane m, and a crystallographic inversion centre is in the middle of the tetra-zine ring, generating the zigzag fashion of the two-dimensional network. The infinite -Cu-SCN-Cu-SCN- chain is due to translational symmetry along the a axis. These chains are further connected through the 3,6-di-4-pyridyl-1,2,4,5-tetra-zine ligands that bridge the Cu(I) centers, generating a two-dimensional network. There are π-π stacking inter-actions between the pyridine and tetra-zine rings (perpendicular distances of 3.357 and 3.418 Å), with a centroid-centroid distance of 3.6785 (16) Å.

Entities:  

Year:  2010        PMID: 21579678      PMCID: PMC2979958          DOI: 10.1107/S1600536810001431

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For compounds with related architectures, see: Oxtoby et al. (2003 ▶); Dinolfo et al. (2004 ▶); Hsu et al. (2006 ▶); Xue et al. (2008 ▶); Withersby et al. (1997 ▶, 2000 ▶).

Experimental

Crystal data

[Cu(NCS)(C12H8N6)] M = 357.88 Monoclinic, a = 5.8640 (12) Å b = 18.510 (4) Å c = 6.3993 (13) Å β = 104.42 (3)° V = 672.7 (2) Å3 Z = 2 Mo Kα radiation μ = 1.79 mm−1 T = 250 K 0.20 × 0.20 × 0.20 mm

Data collection

Rigaku Mercury diffractometer Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.445, T max = 0.738 3288 measured reflections 1373 independent reflections 1304 reflections with I > 2σ(I) R int = 0.018

Refinement

R[F 2 > 2σ(F 2)] = 0.033 wR(F 2) = 0.069 S = 1.11 1373 reflections 106 parameters H-atom parameters constrained Δρmax = 0.48 e Å−3 Δρmin = −0.36 e Å−3 Data collection: CrystalClear (Rigaku, 2008 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810001431/si2230sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810001431/si2230Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(NCS)(C12H8N6)]F(000) = 360
Mr = 357.88Dx = 1.767 Mg m3
Monoclinic, P21/mMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybCell parameters from 2914 reflections
a = 5.8640 (12) Åθ = 3.3–28.9°
b = 18.510 (4) ŵ = 1.79 mm1
c = 6.3993 (13) ÅT = 250 K
β = 104.42 (3)°Prism, black
V = 672.7 (2) Å30.20 × 0.20 × 0.20 mm
Z = 2
Rigaku Mercury diffractometer1373 independent reflections
Radiation source: fine-focus sealed tube1304 reflections with I > 2σ(I)
graphiteRint = 0.018
Detector resolution: 28.5714 pixels mm-1θmax = 26.4°, θmin = 3.3°
dtprofit.ref scansh = −7→5
Absorption correction: multi-scan (ABSCOR; Higashi, 1995)k = −22→20
Tmin = 0.445, Tmax = 0.738l = −8→7
3288 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.033Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.069H-atom parameters constrained
S = 1.11w = 1/[σ2(Fo2) + (0.0163P)2 + 0.7211P] where P = (Fo2 + 2Fc2)/3
1373 reflections(Δ/σ)max < 0.001
106 parametersΔρmax = 0.48 e Å3
0 restraintsΔρmin = −0.36 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu1−0.50890 (7)0.2500−0.44195 (7)0.03870 (15)
S1−0.83431 (16)0.2500−0.71812 (15)0.0502 (3)
N1−0.5137 (3)0.16473 (11)−0.2265 (3)0.0379 (5)
N2−1.2068 (5)0.2500−0.5169 (5)0.0454 (7)
N3−0.7033 (4)0.00418 (13)0.3425 (3)0.0465 (5)
N4−0.3006 (4)0.03426 (13)0.4828 (3)0.0467 (5)
C1−0.7064 (4)0.12996 (14)−0.2042 (4)0.0407 (6)
H1A−0.84410.1346−0.31310.049*
C2−0.5081 (4)0.07992 (13)0.1348 (4)0.0351 (5)
C3−0.7118 (4)0.08763 (14)−0.0286 (4)0.0407 (6)
H3A−0.85000.0646−0.01980.049*
C4−0.5051 (4)0.03705 (13)0.3302 (4)0.0373 (5)
C5−0.3166 (5)0.15430 (15)−0.0716 (4)0.0436 (6)
H5A−0.17890.1761−0.08710.052*
C6−0.3058 (4)0.11312 (14)0.1092 (4)0.0417 (6)
H6A−0.16430.10770.21290.050*
C7−1.0503 (6)0.2500−0.5953 (5)0.0374 (8)
U11U22U33U12U13U23
Cu10.0309 (2)0.0500 (3)0.0350 (2)0.0000.00798 (17)0.000
S10.0272 (4)0.0901 (8)0.0326 (5)0.0000.0059 (3)0.000
N10.0372 (11)0.0403 (11)0.0357 (11)0.0029 (9)0.0079 (9)0.0063 (9)
N20.0297 (15)0.057 (2)0.0506 (19)0.0000.0111 (14)0.000
N30.0462 (13)0.0554 (14)0.0363 (11)−0.0009 (11)0.0070 (9)0.0117 (10)
N40.0458 (13)0.0558 (14)0.0369 (11)−0.0005 (11)0.0075 (10)0.0097 (10)
C10.0349 (13)0.0462 (14)0.0386 (13)0.0031 (11)0.0047 (10)0.0071 (11)
C20.0429 (13)0.0324 (12)0.0305 (11)0.0032 (10)0.0101 (10)−0.0016 (10)
C30.0353 (12)0.0444 (14)0.0432 (14)0.0002 (11)0.0112 (11)0.0081 (11)
C40.0430 (14)0.0361 (13)0.0334 (12)0.0040 (11)0.0105 (10)−0.0004 (10)
C50.0376 (13)0.0484 (15)0.0426 (14)−0.0044 (12)0.0060 (11)0.0072 (12)
C60.0391 (13)0.0483 (15)0.0340 (13)−0.0009 (11)0.0024 (10)0.0035 (11)
C70.0297 (17)0.046 (2)0.0330 (17)0.0000.0008 (14)0.000
Cu1—N2i1.948 (3)N4—N3iv1.321 (3)
Cu1—N1ii2.100 (2)N4—C41.346 (3)
Cu1—N12.100 (2)C1—C31.377 (3)
Cu1—S12.2550 (13)C1—H1A0.9300
S1—C71.648 (4)C2—C61.381 (3)
N1—C51.336 (3)C2—C31.385 (3)
N1—C11.339 (3)C2—C41.477 (3)
N2—C71.150 (4)C3—H3A0.9300
N2—Cu1iii1.948 (3)C5—C61.374 (3)
N3—N4iv1.321 (3)C5—H5A0.9300
N3—C41.332 (3)C6—H6A0.9300
N2i—Cu1—N1ii108.87 (8)C6—C2—C3118.0 (2)
N2i—Cu1—N1108.87 (8)C6—C2—C4120.7 (2)
N1ii—Cu1—N197.43 (11)C3—C2—C4121.4 (2)
N2i—Cu1—S1116.81 (10)C1—C3—C2119.0 (2)
N1ii—Cu1—S1111.55 (6)C1—C3—H3A120.5
N1—Cu1—S1111.55 (6)C2—C3—H3A120.5
C7—S1—Cu1103.11 (12)N3—C4—N4125.0 (2)
C5—N1—C1116.6 (2)N3—C4—C2118.0 (2)
C5—N1—Cu1116.43 (17)N4—C4—C2117.1 (2)
C1—N1—Cu1125.52 (16)N1—C5—C6123.7 (2)
C7—N2—Cu1iii168.8 (3)N1—C5—H5A118.1
N4iv—N3—C4117.7 (2)C6—C5—H5A118.1
N3iv—N4—C4117.3 (2)C5—C6—C2119.1 (2)
N1—C1—C3123.5 (2)C5—C6—H6A120.5
N1—C1—H1A118.2C2—C6—H6A120.5
C3—C1—H1A118.2N2—C7—S1177.5 (3)
Table 1

Selected bond lengths (Å)

Cu1—N2i1.948 (3)
Cu1—N1ii2.100 (2)
Cu1—N12.100 (2)
Cu1—S12.2550 (13)

Symmetry codes: (i) ; (ii) .

  3 in total

1.  Rhenium-based molecular rectangles as frameworks for ligand-centered mixed valency and optical electron transfer.

Authors:  Peter H Dinolfo; Mary Elizabeth Williams; Charlotte L Stern; Joseph T Hupp
Journal:  J Am Chem Soc       Date:  2004-10-13       Impact factor: 15.419

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Robust metal-organic framework enforced by triple-framework interpenetration exhibiting high H2 storage density.

Authors:  Ming Xue; Shengqian Ma; Zhao Jin; Roxanna M Schaffino; Guang-Shan Zhu; Emil B Lobkovsky; Shi-Lun Qiu; Banglin Chen
Journal:  Inorg Chem       Date:  2008-06-27       Impact factor: 5.165

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