Literature DB >> 21579621

[Diphenyldi(pyrazol-1-yl)methane]-dinitratocobalt(II).

Janet L Shaw, Bruce C Noll.   

Abstract

In the title compound, [Co(NO(3))(2)(C(19)H(16)N(4))], the diphenyl-dipyrazolylmethane ligand coordinates to Co(II) in a bidentate fashion forming a six-membered ring with an approximate boat configuration. The mean planes of the two pyrazolyl rings are separated by an angle of 39.6 (2)°. The coordination at the Co(II) center is best described as distorted octa-hedral with two NO(3) (-) anions serving as bidentate ligands for charge balance. The dihedral angle between the mean planes of the two nitrate rings is 85.0 (1)° and that between the mean planes of the two phenyl rings is 73.7 (1)°. The crystal structure is stabilized by weak inter-molecular C-H⋯O and intra-molecular C-H⋯N hydrogen-bond inter-actions.

Entities:  

Year:  2010        PMID: 21579621      PMCID: PMC2979699          DOI: 10.1107/S1600536810000565

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures incorporating diphenyl­dipyrazolyl­methane ligands, see: Shiu et al. (1993 ▶); Tsuji et al. (1999 ▶); Reger et al. (2004 ▶); Shaw et al. (2004 ▶, 2005 ▶, 2009 ▶); Baho & Zargarian (2007a ▶,b ▶).

Experimental

Crystal data

[Co(NO3)2(C19H16N4)] M = 483.31 Monoclinic, a = 8.5476 (14) Å b = 14.8058 (17) Å c = 16.818 (3) Å β = 103.383 (4)° V = 2070.6 (5) Å3 Z = 4 Mo Kα radiation μ = 0.88 mm−1 T = 200 K 0.50 × 0.30 × 0.30 mm

Data collection

Bruker SMART X2S benchtop diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2008a ▶) T min = 0.668, T max = 0.778 13223 measured reflections 3666 independent reflections 3042 reflections with I > 2σ(I) R int = 0.035

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.118 S = 0.96 3666 reflections 289 parameters H-atom parameters constrained Δρmax = 0.42 e Å−3 Δρmin = −0.45 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: APEX2 and SAINT (Bruker, 2009 ▶); data reduction: SAINT and XPREP (Bruker, 2008 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008b ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008b ▶); molecular graphics: SHELXTL (Sheldrick, 2008b ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810000565/jj2017sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810000565/jj2017Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Co(NO3)2(C19H16N4)]F(000) = 988
Mr = 483.31Dx = 1.550 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 5780 reflections
a = 8.5476 (14) Åθ = 2.5–24.7°
b = 14.8058 (17) ŵ = 0.88 mm1
c = 16.818 (3) ÅT = 200 K
β = 103.383 (4)°Block, red
V = 2070.6 (5) Å30.50 × 0.30 × 0.30 mm
Z = 4
Bruker SMART X2S benchtop diffractometer3666 independent reflections
Radiation source: microfocus sealed tube3042 reflections with I > 2σ(I)
doubly curved silicon crystalRint = 0.035
ω scansθmax = 25.1°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Sheldrick, 2008a)h = −10→10
Tmin = 0.668, Tmax = 0.778k = −13→17
13223 measured reflectionsl = −19→19
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.035Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.118H-atom parameters constrained
S = 0.96w = 1/[σ2(Fo2) + (0.0648P)2 + 0.2696P] where P = (Fo2 + 2Fc2)/3
3666 reflections(Δ/σ)max = 0.001
289 parametersΔρmax = 0.42 e Å3
0 restraintsΔρmin = −0.45 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Co11.03355 (4)0.17196 (2)0.34055 (2)0.02457 (16)
N10.7926 (2)0.22829 (13)0.18460 (12)0.0213 (5)
N20.9396 (3)0.24461 (14)0.23606 (13)0.0235 (5)
N30.6768 (2)0.14506 (15)0.28100 (13)0.0237 (5)
N40.8088 (2)0.13421 (15)0.34433 (13)0.0265 (5)
C11.0006 (3)0.31437 (17)0.20321 (17)0.0291 (6)
H11.09910.34130.22580.035*
C20.8968 (4)0.34157 (18)0.13031 (18)0.0318 (6)
H20.91230.38850.09610.038*
C30.7677 (3)0.28493 (17)0.11973 (16)0.0278 (6)
H30.67860.28520.07580.033*
C40.7511 (3)0.1164 (2)0.40996 (17)0.0337 (7)
H40.81410.10700.46230.040*
C50.5849 (4)0.1140 (2)0.38961 (18)0.0393 (7)
H50.51700.10290.42440.047*
C60.5413 (3)0.1313 (2)0.30753 (17)0.0311 (6)
H60.43680.13310.27570.037*
C70.6991 (3)0.14624 (17)0.19537 (15)0.0220 (5)
C80.5318 (3)0.15306 (17)0.13787 (15)0.0229 (6)
C90.4379 (3)0.22968 (18)0.14071 (17)0.0292 (6)
H90.47800.27640.17660.035*
C100.2851 (3)0.23643 (19)0.09023 (16)0.0316 (6)
H100.22250.28740.09230.038*
C110.2264 (3)0.16684 (19)0.03673 (18)0.0325 (7)
H110.12400.17100.00270.039*
C120.3187 (3)0.0916 (2)0.03361 (17)0.0329 (6)
H120.27830.0450−0.00230.039*
C130.4716 (3)0.08490 (18)0.08371 (16)0.0267 (6)
H130.53390.03410.08080.032*
C140.7942 (3)0.06191 (17)0.18337 (15)0.0212 (5)
C150.7524 (3)−0.02053 (18)0.21221 (17)0.0288 (6)
H150.6694−0.02350.23940.035*
C160.8343 (3)−0.09812 (19)0.20048 (18)0.0356 (7)
H160.8047−0.15330.21900.043*
C170.9592 (3)−0.0945 (2)0.16159 (16)0.0314 (7)
H171.0155−0.14660.15500.038*
C181.0000 (3)−0.01311 (18)0.13258 (16)0.0291 (6)
H181.0840−0.01050.10610.035*
C190.9174 (3)0.06503 (17)0.14234 (15)0.0248 (6)
H190.94450.11950.12140.030*
N51.2003 (3)0.03089 (17)0.38553 (19)0.0432 (7)
O11.1748 (2)0.06871 (14)0.31497 (13)0.0377 (5)
O21.1390 (3)0.07016 (16)0.43733 (14)0.0486 (6)
O31.2805 (3)−0.03780 (16)0.4002 (2)0.0696 (8)
N61.1981 (3)0.29851 (17)0.42180 (14)0.0350 (6)
O41.0646 (2)0.26855 (14)0.43302 (12)0.0370 (5)
O51.2473 (2)0.26008 (14)0.36490 (13)0.0382 (5)
O61.2721 (3)0.35837 (17)0.46355 (14)0.0579 (7)
U11U22U33U12U13U23
Co10.0188 (2)0.0290 (3)0.0254 (2)−0.00224 (13)0.00403 (16)−0.00001 (14)
N10.0205 (11)0.0212 (11)0.0222 (11)−0.0004 (8)0.0047 (9)−0.0017 (8)
N20.0210 (11)0.0229 (11)0.0272 (11)−0.0030 (9)0.0067 (9)−0.0025 (9)
N30.0207 (11)0.0298 (11)0.0210 (11)−0.0023 (9)0.0058 (9)−0.0030 (9)
N40.0220 (11)0.0344 (12)0.0223 (11)−0.0030 (10)0.0032 (9)−0.0003 (9)
C10.0282 (15)0.0282 (14)0.0326 (15)−0.0059 (11)0.0102 (12)−0.0035 (11)
C20.0368 (16)0.0267 (14)0.0337 (16)−0.0023 (12)0.0123 (13)0.0057 (12)
C30.0329 (15)0.0267 (14)0.0240 (14)0.0036 (11)0.0072 (12)0.0009 (11)
C40.0313 (15)0.0478 (18)0.0224 (14)−0.0073 (13)0.0076 (12)−0.0004 (12)
C50.0329 (16)0.059 (2)0.0305 (16)−0.0096 (15)0.0170 (13)−0.0008 (14)
C60.0218 (14)0.0407 (16)0.0330 (15)−0.0029 (12)0.0109 (12)−0.0035 (13)
C70.0207 (13)0.0245 (13)0.0209 (13)−0.0034 (10)0.0048 (10)−0.0021 (10)
C80.0206 (13)0.0260 (13)0.0228 (13)0.0004 (10)0.0065 (11)0.0006 (10)
C90.0270 (14)0.0292 (15)0.0316 (15)0.0006 (11)0.0070 (12)−0.0032 (11)
C100.0240 (14)0.0357 (15)0.0358 (16)0.0083 (12)0.0081 (12)0.0009 (12)
C110.0221 (14)0.0448 (18)0.0289 (15)−0.0013 (12)0.0025 (12)0.0013 (12)
C120.0291 (15)0.0357 (16)0.0319 (15)−0.0050 (12)0.0029 (12)−0.0092 (12)
C130.0264 (14)0.0253 (13)0.0280 (14)0.0016 (11)0.0054 (11)−0.0025 (11)
C140.0193 (12)0.0233 (13)0.0206 (12)0.0001 (10)0.0035 (10)−0.0017 (10)
C150.0274 (14)0.0293 (15)0.0311 (15)0.0018 (11)0.0100 (12)0.0050 (11)
C160.0411 (17)0.0235 (14)0.0426 (17)0.0040 (12)0.0106 (14)0.0090 (12)
C170.0324 (15)0.0278 (15)0.0314 (15)0.0090 (11)0.0022 (13)−0.0019 (11)
C180.0241 (13)0.0350 (15)0.0291 (14)0.0019 (11)0.0082 (12)−0.0069 (12)
C190.0257 (13)0.0238 (13)0.0247 (13)−0.0027 (11)0.0055 (11)−0.0012 (10)
N50.0272 (13)0.0356 (14)0.0631 (19)−0.0012 (11)0.0030 (13)0.0115 (13)
O10.0304 (11)0.0371 (11)0.0450 (12)0.0022 (9)0.0073 (9)−0.0004 (10)
O20.0457 (13)0.0550 (14)0.0452 (13)0.0062 (11)0.0108 (11)0.0152 (11)
O30.0546 (16)0.0409 (14)0.112 (2)0.0174 (12)0.0161 (16)0.0256 (14)
N60.0356 (14)0.0373 (14)0.0293 (13)−0.0105 (11)0.0020 (11)−0.0006 (11)
O40.0335 (11)0.0477 (12)0.0304 (11)−0.0102 (9)0.0087 (9)−0.0085 (9)
O50.0325 (11)0.0439 (12)0.0383 (12)−0.0100 (9)0.0081 (9)−0.0036 (9)
O60.0704 (17)0.0561 (14)0.0429 (13)−0.0357 (13)0.0045 (12)−0.0139 (11)
Co1—N42.015 (2)C8—C91.397 (4)
Co1—O12.054 (2)C9—C101.387 (4)
Co1—N22.058 (2)C9—H90.9300
Co1—O42.0841 (19)C10—C111.383 (4)
Co1—O52.205 (2)C10—H100.9300
Co1—O22.248 (2)C11—C121.372 (4)
N1—C31.353 (3)C11—H110.9300
N1—N21.372 (3)C12—C131.385 (4)
N1—C71.488 (3)C12—H120.9300
N2—C11.333 (3)C13—H130.9300
N3—C61.350 (3)C14—C191.387 (3)
N3—N41.370 (3)C14—C151.390 (4)
N3—C71.496 (3)C15—C161.383 (4)
N4—C41.335 (3)C15—H150.9300
C1—C21.396 (4)C16—C171.376 (4)
C1—H10.9300C16—H160.9300
C2—C31.364 (4)C17—C181.375 (4)
C2—H20.9300C17—H170.9300
C3—H30.9300C18—C191.385 (4)
C4—C51.382 (4)C18—H180.9300
C4—H40.9300C19—H190.9300
C5—C61.368 (4)N5—O31.219 (3)
C5—H50.9300N5—O21.258 (4)
C6—H60.9300N5—O11.284 (3)
C7—C141.528 (3)N6—O61.214 (3)
C7—C81.533 (3)N6—O51.266 (3)
C8—C131.377 (4)N6—O41.278 (3)
N4—Co1—O1114.25 (9)N3—C7—C8107.4 (2)
N4—Co1—N289.17 (9)C14—C7—C8114.7 (2)
O1—Co1—N2110.01 (8)C13—C8—C9119.2 (2)
N4—Co1—O497.15 (8)C13—C8—C7121.4 (2)
O1—Co1—O4133.44 (8)C9—C8—C7119.4 (2)
N2—Co1—O4103.62 (8)C10—C9—C8120.3 (2)
N4—Co1—O5155.92 (9)C10—C9—H9119.8
O1—Co1—O588.71 (8)C8—C9—H9119.8
N2—Co1—O589.55 (8)C11—C10—C9119.5 (3)
O4—Co1—O559.90 (8)C11—C10—H10120.2
N4—Co1—O290.96 (9)C9—C10—H10120.2
O1—Co1—O259.74 (9)C12—C11—C10120.3 (3)
N2—Co1—O2168.60 (9)C12—C11—H11119.9
O4—Co1—O287.67 (9)C10—C11—H11119.9
O5—Co1—O294.93 (8)C11—C12—C13120.3 (3)
C3—N1—N2110.5 (2)C11—C12—H12119.8
C3—N1—C7128.0 (2)C13—C12—H12119.8
N2—N1—C7120.40 (19)C8—C13—C12120.3 (2)
C1—N2—N1105.3 (2)C8—C13—H13119.8
C1—N2—Co1130.24 (18)C12—C13—H13119.8
N1—N2—Co1124.46 (15)C19—C14—C15119.3 (2)
C6—N3—N4109.9 (2)C19—C14—C7121.8 (2)
C6—N3—C7129.1 (2)C15—C14—C7118.9 (2)
N4—N3—C7119.0 (2)C16—C15—C14120.0 (2)
C4—N4—N3105.7 (2)C16—C15—H15120.0
C4—N4—Co1128.17 (18)C14—C15—H15120.0
N3—N4—Co1124.22 (16)C17—C16—C15120.6 (3)
N2—C1—C2110.9 (2)C17—C16—H16119.7
N2—C1—H1124.5C15—C16—H16119.7
C2—C1—H1124.5C18—C17—C16119.4 (2)
C3—C2—C1105.5 (2)C18—C17—H17120.3
C3—C2—H2127.2C16—C17—H17120.3
C1—C2—H2127.2C17—C18—C19120.8 (2)
N1—C3—C2107.7 (2)C17—C18—H18119.6
N1—C3—H3126.1C19—C18—H18119.6
C2—C3—H3126.1C18—C19—C14119.9 (2)
N4—C4—C5110.8 (2)C18—C19—H19120.1
N4—C4—H4124.6C14—C19—H19120.1
C5—C4—H4124.6O3—N5—O2123.3 (3)
C6—C5—C4105.6 (3)O3—N5—O1121.2 (3)
C6—C5—H5127.2O2—N5—O1115.4 (2)
C4—C5—H5127.2N5—O1—Co196.51 (17)
N3—C6—C5107.9 (2)N5—O2—Co188.28 (16)
N3—C6—H6126.0O6—N6—O5123.1 (3)
C5—C6—H6126.0O6—N6—O4122.1 (3)
N1—C7—N3108.57 (19)O5—N6—O4114.8 (2)
N1—C7—C14109.52 (19)N6—O4—Co195.26 (15)
N3—C7—C14107.9 (2)N6—O5—Co190.03 (15)
N1—C7—C8108.6 (2)
C3—N1—N2—C12.5 (3)C14—C7—C8—C133.7 (4)
C7—N1—N2—C1171.1 (2)N1—C7—C8—C9−53.9 (3)
C3—N1—N2—Co1−177.56 (16)N3—C7—C8—C963.3 (3)
C7—N1—N2—Co1−8.9 (3)C14—C7—C8—C9−176.7 (2)
N4—Co1—N2—C1157.3 (2)C13—C8—C9—C100.8 (4)
O1—Co1—N2—C1−87.1 (2)C7—C8—C9—C10−178.8 (2)
O4—Co1—N2—C160.2 (2)C8—C9—C10—C11−0.3 (4)
O5—Co1—N2—C11.4 (2)C9—C10—C11—C120.0 (4)
O2—Co1—N2—C1−111.9 (4)C10—C11—C12—C13−0.3 (4)
N4—Co1—N2—N1−22.63 (19)C9—C8—C13—C12−1.0 (4)
O1—Co1—N2—N192.95 (19)C7—C8—C13—C12178.6 (2)
O4—Co1—N2—N1−119.78 (18)C11—C12—C13—C80.8 (4)
O5—Co1—N2—N1−178.58 (19)N1—C7—C14—C19−19.7 (3)
O2—Co1—N2—N168.1 (5)N3—C7—C14—C19−137.7 (2)
C6—N3—N4—C4−1.9 (3)C8—C7—C14—C19102.6 (3)
C7—N3—N4—C4−167.1 (2)N1—C7—C14—C15162.4 (2)
C6—N3—N4—Co1−167.12 (19)N3—C7—C14—C1544.4 (3)
C7—N3—N4—Co127.7 (3)C8—C7—C14—C15−75.3 (3)
O1—Co1—N4—C499.7 (3)C19—C14—C15—C160.5 (4)
N2—Co1—N4—C4−148.7 (3)C7—C14—C15—C16178.6 (2)
O4—Co1—N4—C4−45.1 (3)C14—C15—C16—C171.1 (4)
O5—Co1—N4—C4−61.7 (3)C15—C16—C17—C18−1.5 (4)
O2—Co1—N4—C442.7 (3)C16—C17—C18—C190.3 (4)
O1—Co1—N4—N3−98.5 (2)C17—C18—C19—C141.4 (4)
N2—Co1—N4—N313.1 (2)C15—C14—C19—C18−1.8 (4)
O4—Co1—N4—N3116.75 (19)C7—C14—C19—C18−179.7 (2)
O5—Co1—N4—N3100.1 (3)O3—N5—O1—Co1178.8 (2)
O2—Co1—N4—N3−155.5 (2)O2—N5—O1—Co1−2.1 (3)
N1—N2—C1—C2−1.5 (3)N4—Co1—O1—N5−74.82 (17)
Co1—N2—C1—C2178.50 (18)N2—Co1—O1—N5−173.28 (15)
N2—C1—C2—C30.1 (3)O4—Co1—O1—N553.1 (2)
N2—N1—C3—C2−2.5 (3)O5—Co1—O1—N597.67 (16)
C7—N1—C3—C2−170.1 (2)O2—Co1—O1—N51.20 (15)
C1—C2—C3—N11.4 (3)O3—N5—O2—Co1−179.0 (3)
N3—N4—C4—C51.1 (3)O1—N5—O2—Co11.9 (2)
Co1—N4—C4—C5165.6 (2)N4—Co1—O2—N5116.54 (17)
N4—C4—C5—C60.0 (4)O1—Co1—O2—N5−1.22 (15)
N4—N3—C6—C51.9 (3)N2—Co1—O2—N526.0 (5)
C7—N3—C6—C5165.2 (3)O4—Co1—O2—N5−146.35 (17)
C4—C5—C6—N3−1.1 (3)O5—Co1—O2—N5−86.83 (17)
C3—N1—C7—N3−138.1 (2)O6—N6—O4—Co1−178.9 (3)
N2—N1—C7—N355.4 (3)O5—N6—O4—Co10.1 (2)
C3—N1—C7—C14104.3 (3)N4—Co1—O4—N6−172.34 (16)
N2—N1—C7—C14−62.2 (3)O1—Co1—O4—N654.13 (19)
C3—N1—C7—C8−21.6 (3)N2—Co1—O4—N6−81.46 (17)
N2—N1—C7—C8171.9 (2)O5—Co1—O4—N6−0.08 (14)
C6—N3—C7—N1131.7 (3)O2—Co1—O4—N696.98 (16)
N4—N3—C7—N1−66.4 (3)O6—N6—O5—Co1178.9 (3)
C6—N3—C7—C14−109.7 (3)O4—N6—O5—Co1−0.1 (2)
N4—N3—C7—C1452.3 (3)N4—Co1—O5—N619.2 (3)
C6—N3—C7—C814.4 (4)O1—Co1—O5—N6−143.82 (16)
N4—N3—C7—C8176.4 (2)N2—Co1—O5—N6106.16 (16)
N1—C7—C8—C13126.5 (2)O4—Co1—O5—N60.08 (14)
N3—C7—C8—C13−116.3 (3)O2—Co1—O5—N6−84.34 (16)
D—H···AD—HH···AD···AD—H···A
C17—H17···O5i0.932.543.413 (3)157
C10—H10···O3ii0.932.593.399 (4)146
C3—H3···O4iii0.932.503.313 (3)146
C19—H19···N10.932.462.799 (3)102
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C17—H17⋯O5i0.932.543.413 (3)157
C10—H10⋯O3ii0.932.593.399 (4)146
C3—H3⋯O4iii0.932.503.313 (3)146
C19—H19⋯N10.932.462.799 (3)102

Symmetry codes: (i) ; (ii) ; (iii) .

  5 in total

1.  Syntheses, structures, spectroscopy, and chromotropism of new complexes arising from the reaction of nickel(II) nitrate with diphenyl(dipyrazolyl)methane.

Authors:  Natalie Baho; Davit Zargarian
Journal:  Inorg Chem       Date:  2007-01-08       Impact factor: 5.165

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Magneto-structural relationships in a series of dinuclear oxalato-bridged (diphenyldipyrazolylmethane)copper(II) complexes.

Authors:  Janet L Shaw; Gordon T Yee; Guangbin Wang; David E Benson; Cagil Gokdemir; Christopher J Ziegler
Journal:  Inorg Chem       Date:  2005-07-11       Impact factor: 5.165

4.  Tuning the coordination geometry of silver in bis(pyrazolyl)alkane complexes.

Authors:  Daniel L Reger; James R Gardinier; Mark D Smith
Journal:  Inorg Chem       Date:  2004-06-28       Impact factor: 5.165

5.  Diphenyl(dipyrazolyl)methane complexes of Ni: synthesis, structural characterization, and chromotropism of NiBr2 derivatives.

Authors:  Natalie Baho; Davit Zargarian
Journal:  Inorg Chem       Date:  2007-08-01       Impact factor: 5.165

  5 in total

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