Literature DB >> 21579565

1-Formyl-t-3,t-5-dimethyl-r-2,c-6-diphenyl-piperidin-4-one.

K Ravichandran, P Ramesh, P Sakthivel, S Ponnuswamy, M N Ponnuswamy.   

Abstract

In the title compound, C(20)H(21)NO(2), the piperidine ring adopts a distorted boat conformation. The dihedral angle between the two phenyl rings is 61.33 (18)°. In the crystal, inter-molecular C-H⋯O inter-actions link the mol-ecules into zigzag C(5) chains running parallel to [100].

Entities:  

Year:  2010        PMID: 21579565      PMCID: PMC2979406          DOI: 10.1107/S1600536810018490

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to piperidine derivatives, see: Perumal et al. (2001 ▶); Dimmock et al. (2001 ▶). For asymmetry parameters, see: Nardelli (1983 ▶). For puckering parameters, see: Cremer & Pople (1975 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For the synthesis, see: Jeyaraman et al. (1999 ▶).

Experimental

Crystal data

C20H21NO2 M = 307.38 Orthorhombic, a = 7.4303 (4) Å b = 15.3567 (6) Å c = 29.6732 (13) Å V = 3385.9 (3) Å3 Z = 8 Mo Kα radiation μ = 0.08 mm−1 T = 292 K 0.22 × 0.19 × 0.16 mm

Data collection

Bruker SMART APEXII area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.983, T max = 0.988 16882 measured reflections 4198 independent reflections 2097 reflections with I > 2σ(I) R int = 0.030

Refinement

R[F 2 > 2σ(F 2)] = 0.059 wR(F 2) = 0.194 S = 1.02 4198 reflections 213 parameters 25 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.37 e Å−3 Δρmin = −0.23 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810018490/ci5087sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810018490/ci5087Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H21NO2F(000) = 1312
Mr = 307.38Dx = 1.206 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 1246 reflections
a = 7.4303 (4) Åθ = 1.4–28.4°
b = 15.3567 (6) ŵ = 0.08 mm1
c = 29.6732 (13) ÅT = 292 K
V = 3385.9 (3) Å3Block, colourless
Z = 80.22 × 0.19 × 0.16 mm
Bruker SMART APEXII area-detector diffractometer4198 independent reflections
Radiation source: fine-focus sealed tube2097 reflections with I > 2σ(I)
graphiteRint = 0.030
ω and φ scansθmax = 28.4°, θmin = 1.4°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −9→6
Tmin = 0.983, Tmax = 0.988k = −20→18
16882 measured reflectionsl = −39→38
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.059Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.194H atoms treated by a mixture of independent and constrained refinement
S = 1.01w = 1/[σ2(Fo2) + (0.0741P)2 + 1.1948P] where P = (Fo2 + 2Fc2)/3
4198 reflections(Δ/σ)max = 0.001
213 parametersΔρmax = 0.37 e Å3
25 restraintsΔρmin = −0.22 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.0192 (4)0.2060 (2)0.13459 (14)0.1697 (16)
O20.6395 (3)0.38855 (13)0.21978 (6)0.0841 (6)
N10.2046 (3)0.31856 (13)0.14813 (8)0.0690 (6)
C20.3721 (3)0.27494 (15)0.13546 (9)0.0645 (7)
H20.34260.21320.13170.077*
C30.5024 (3)0.28034 (15)0.17521 (8)0.0565 (6)
H30.62040.25960.16510.068*
C40.5235 (3)0.37170 (15)0.19238 (8)0.0563 (6)
C50.3986 (3)0.44063 (14)0.17429 (8)0.0535 (6)
H50.44440.45700.14450.064*
C60.2059 (3)0.40703 (16)0.16730 (8)0.0586 (6)
H60.14980.40340.19710.070*
C70.0458 (5)0.2769 (3)0.14840 (17)0.1186 (15)
C80.4415 (4)0.30662 (16)0.09006 (9)0.0715 (8)
C90.3332 (6)0.2922 (2)0.05318 (12)0.1179 (14)
H90.22430.26320.05690.141*
C100.3834 (9)0.3199 (3)0.01118 (15)0.1455 (18)
H100.31060.3078−0.01350.175*
C110.5382 (9)0.3649 (3)0.00538 (13)0.1369 (17)
H110.56790.3869−0.02290.164*
C120.6510 (6)0.3778 (3)0.04115 (13)0.1199 (14)
H120.76010.40650.03710.144*
C130.6019 (5)0.3479 (2)0.08344 (10)0.0854 (9)
H130.67940.35600.10770.103*
C140.4401 (4)0.22289 (18)0.21443 (10)0.0781 (8)
H14A0.52360.22810.23900.117*
H14B0.43480.16330.20470.117*
H14C0.32290.24130.22420.117*
C150.3989 (4)0.52323 (17)0.20290 (10)0.0779 (8)
H15A0.33430.51280.23040.117*
H15B0.34180.56950.18650.117*
H15C0.52070.53930.20980.117*
C160.0934 (3)0.46917 (17)0.13948 (9)0.0627 (6)
C17−0.0611 (4)0.50498 (19)0.15754 (11)0.0781 (8)
H17−0.09500.48950.18660.094*
C18−0.1656 (4)0.5623 (2)0.13407 (17)0.1041 (12)
H18−0.26860.58550.14720.125*
C19−0.1192 (6)0.5849 (2)0.09201 (18)0.1146 (14)
H19−0.19020.62410.07600.138*
C200.0328 (6)0.5506 (2)0.07227 (12)0.1109 (12)
H200.06380.56620.04300.133*
C210.1400 (5)0.4924 (2)0.09632 (10)0.0881 (9)
H210.24320.46940.08320.106*
H7−0.076 (5)0.287 (2)0.1562 (11)0.106*
U11U22U33U12U13U23
O10.113 (2)0.099 (2)0.298 (4)−0.0455 (18)−0.089 (2)0.053 (2)
O20.0795 (13)0.0781 (13)0.0947 (14)−0.0123 (10)−0.0379 (11)−0.0045 (10)
N10.0443 (11)0.0572 (12)0.1055 (16)−0.0146 (10)−0.0220 (11)0.0253 (11)
C20.0677 (16)0.0427 (12)0.0832 (17)−0.0081 (12)−0.0297 (13)0.0010 (12)
C30.0484 (12)0.0515 (13)0.0695 (14)−0.0012 (11)−0.0139 (11)0.0017 (11)
C40.0486 (12)0.0571 (14)0.0631 (14)−0.0099 (11)−0.0099 (11)0.0045 (11)
C50.0527 (12)0.0480 (12)0.0597 (13)−0.0046 (10)0.0025 (10)0.0044 (10)
C60.0474 (12)0.0678 (15)0.0606 (13)0.0004 (11)0.0032 (10)0.0163 (12)
C70.085 (2)0.078 (2)0.193 (4)−0.038 (2)−0.057 (3)0.057 (2)
C80.096 (2)0.0484 (13)0.0705 (17)0.0024 (14)−0.0257 (15)−0.0083 (12)
C90.172 (4)0.095 (2)0.087 (2)−0.018 (2)−0.062 (2)0.0030 (19)
C100.222 (5)0.127 (4)0.087 (3)−0.001 (4)−0.060 (3)−0.003 (2)
C110.222 (5)0.120 (3)0.069 (2)0.018 (3)0.006 (3)−0.008 (2)
C120.153 (4)0.123 (3)0.083 (2)−0.004 (3)0.030 (3)−0.015 (2)
C130.101 (2)0.089 (2)0.0661 (17)−0.0029 (19)0.0057 (16)−0.0164 (15)
C140.0777 (18)0.0679 (17)0.0887 (19)−0.0093 (14)−0.0188 (15)0.0189 (14)
C150.094 (2)0.0595 (16)0.0801 (18)0.0007 (15)0.0063 (16)−0.0074 (14)
C160.0525 (13)0.0661 (15)0.0696 (15)0.0061 (12)−0.0013 (11)0.0106 (12)
C170.0534 (15)0.0730 (18)0.108 (2)0.0041 (14)0.0022 (15)0.0017 (16)
C180.0604 (18)0.070 (2)0.182 (4)0.0121 (16)−0.019 (2)0.005 (2)
C190.095 (3)0.075 (2)0.174 (4)0.011 (2)−0.054 (3)0.029 (3)
C200.137 (3)0.098 (3)0.097 (2)0.008 (3)−0.023 (2)0.037 (2)
C210.097 (2)0.089 (2)0.0784 (18)0.0259 (17)0.0042 (16)0.0265 (16)
O1—C71.180 (5)C10—H100.93
O2—C41.213 (3)C11—C121.367 (6)
N1—C71.342 (4)C11—H110.93
N1—C21.462 (3)C12—C131.385 (4)
N1—C61.473 (3)C12—H120.93
C2—C81.522 (4)C13—H130.93
C2—C31.528 (3)C14—H14A0.96
C2—H20.98C14—H14B0.96
C3—C41.501 (3)C14—H14C0.96
C3—C141.532 (3)C15—H15A0.96
C3—H30.98C15—H15B0.96
C4—C51.507 (3)C15—H15C0.96
C5—C151.526 (3)C16—C211.374 (4)
C5—C61.536 (3)C16—C171.381 (4)
C5—H50.98C17—C181.365 (4)
C6—C161.513 (3)C17—H170.93
C6—H60.98C18—C191.341 (5)
C7—H70.95 (4)C18—H180.93
C8—C131.363 (4)C19—C201.378 (5)
C8—C91.376 (4)C19—H190.93
C9—C101.369 (6)C20—C211.393 (4)
C9—H90.93C20—H200.93
C10—C111.353 (7)C21—H210.93
C7—N1—C2122.1 (3)C9—C10—H10119.8
C7—N1—C6116.3 (3)C10—C11—C12119.8 (4)
C2—N1—C6121.11 (17)C10—C11—H11120.1
N1—C2—C8111.7 (2)C12—C11—H11120.1
N1—C2—C3108.4 (2)C11—C12—C13119.6 (4)
C8—C2—C3116.8 (2)C11—C12—H12120.2
N1—C2—H2106.4C13—C12—H12120.2
C8—C2—H2106.4C8—C13—C12121.0 (3)
C3—C2—H2106.4C8—C13—H13119.5
C4—C3—C2112.28 (19)C12—C13—H13119.5
C4—C3—C14108.2 (2)C3—C14—H14A109.5
C2—C3—C14111.3 (2)C3—C14—H14B109.5
C4—C3—H3108.3H14A—C14—H14B109.5
C2—C3—H3108.3C3—C14—H14C109.5
C14—C3—H3108.3H14A—C14—H14C109.5
O2—C4—C3120.1 (2)H14B—C14—H14C109.5
O2—C4—C5121.8 (2)C5—C15—H15A109.5
C3—C4—C5118.12 (19)C5—C15—H15B109.5
C4—C5—C15112.6 (2)H15A—C15—H15B109.5
C4—C5—C6112.73 (18)C5—C15—H15C109.5
C15—C5—C6110.8 (2)H15A—C15—H15C109.5
C4—C5—H5106.7H15B—C15—H15C109.5
C15—C5—H5106.7C21—C16—C17117.9 (3)
C6—C5—H5106.7C21—C16—C6122.2 (2)
N1—C6—C16111.6 (2)C17—C16—C6119.9 (2)
N1—C6—C5111.58 (19)C18—C17—C16122.1 (3)
C16—C6—C5112.11 (19)C18—C17—H17118.9
N1—C6—H6107.1C16—C17—H17118.9
C16—C6—H6107.1C19—C18—C17119.7 (3)
C5—C6—H6107.1C19—C18—H18120.1
O1—C7—N1125.8 (5)C17—C18—H18120.1
O1—C7—H794 (2)C18—C19—C20120.5 (3)
N1—C7—H7140 (2)C18—C19—H19119.8
C13—C8—C9118.1 (3)C20—C19—H19119.8
C13—C8—C2124.9 (2)C19—C20—C21119.8 (3)
C9—C8—C2117.0 (3)C19—C20—H20120.1
C10—C9—C8121.0 (4)C21—C20—H20120.1
C10—C9—H9119.5C16—C21—C20120.0 (3)
C8—C9—H9119.5C16—C21—H21120.0
C11—C10—C9120.4 (4)C20—C21—H21120.0
C11—C10—H10119.8
C7—N1—C2—C8109.2 (3)C6—N1—C7—O1−179.9 (4)
C6—N1—C2—C8−79.4 (3)N1—C2—C8—C13117.9 (3)
C7—N1—C2—C3−120.7 (3)C3—C2—C8—C13−7.7 (4)
C6—N1—C2—C350.6 (3)N1—C2—C8—C9−62.1 (3)
N1—C2—C3—C4−51.5 (3)C3—C2—C8—C9172.3 (3)
C8—C2—C3—C475.6 (3)C13—C8—C9—C10−1.2 (5)
N1—C2—C3—C1469.9 (2)C2—C8—C9—C10178.8 (4)
C8—C2—C3—C14−162.9 (2)C8—C9—C10—C11−2.3 (7)
C2—C3—C4—O2−170.3 (2)C9—C10—C11—C124.3 (8)
C14—C3—C4—O266.4 (3)C10—C11—C12—C13−2.7 (7)
C2—C3—C4—C59.2 (3)C9—C8—C13—C122.7 (5)
C14—C3—C4—C5−114.1 (2)C2—C8—C13—C12−177.3 (3)
O2—C4—C5—C15−16.0 (3)C11—C12—C13—C8−0.8 (6)
C3—C4—C5—C15164.5 (2)N1—C6—C16—C21−66.4 (3)
O2—C4—C5—C6−142.4 (2)C5—C6—C16—C2159.5 (3)
C3—C4—C5—C638.2 (3)N1—C6—C16—C17114.1 (3)
C7—N1—C6—C16−65.6 (3)C5—C6—C16—C17−120.0 (3)
C2—N1—C6—C16122.6 (2)C21—C16—C17—C18−0.5 (4)
C7—N1—C6—C5168.1 (3)C6—C16—C17—C18179.0 (3)
C2—N1—C6—C5−3.7 (3)C16—C17—C18—C190.3 (5)
C4—C5—C6—N1−40.9 (3)C17—C18—C19—C200.2 (6)
C15—C5—C6—N1−168.1 (2)C18—C19—C20—C21−0.5 (6)
C4—C5—C6—C16−166.8 (2)C17—C16—C21—C200.1 (5)
C15—C5—C6—C1665.9 (3)C6—C16—C21—C20−179.4 (3)
C2—N1—C7—O1−8.2 (6)C19—C20—C21—C160.4 (5)
D—H···AD—HH···AD···AD—H···A
C6—H6···O2i0.982.483.398 (3)156
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C6—H6⋯O2i0.982.483.398 (3)156

Symmetry code: (i) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  A conformational and structure-activity relationship study of cytotoxic 3,5-bis(arylidene)-4-piperidones and related N-acryloyl analogues.

Authors:  J R Dimmock; M P Padmanilayam; R N Puthucode; A J Nazarali; N L Motaganahalli; G A Zello; J W Quail; E O Oloo; H B Kraatz; J S Prisciak; T M Allen; C L Santos; J Balzarini; E De Clercq; E K Manavathu
Journal:  J Med Chem       Date:  2001-02-15       Impact factor: 7.446

3.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  3 in total

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