| Literature DB >> 21579529 |
Abstract
In the crystal of the title compound, C(8)H(12)NO(+)·PF(6) (-)·H(2)O, inter-molecular N-H⋯F, N-H⋯O and O-H⋯F hydrogen bonds link the mol-ecules into chains along the c axis and C-H⋯π contacts further stabilize the structure. The F atoms of one of the hexa-fluoro-phosphate anions are disordered over two sets of sites with site-occupancy factors of 0.27 (3) and 0.73 (3).Entities:
Year: 2010 PMID: 21579529 PMCID: PMC2979371 DOI: 10.1107/S1600536810018404
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C8H12NO+·PF6−·H2O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 4774 reflections |
| θ = 3.1–27.7° | |
| µ = 0.29 mm−1 | |
| β = 111.68 (3)° | Prism, colourless |
| 0.4 × 0.3 × 0.2 mm | |
| Rigaku SCXmini diffractometer | 2820 independent reflections |
| Radiation source: fine-focus sealed tube | 1890 reflections with |
| graphite | |
| Detector resolution: 13.6612 pixels mm-1 | θmax = 27.5°, θmin = 3.1° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 12124 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2820 reflections | (Δ/σ)max = 0.003 |
| 226 parameters | Δρmax = 0.45 e Å−3 |
| 235 restraints | Δρmin = −0.48 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| N1 | 0.15275 (14) | 0.3564 (5) | 0.42609 (17) | 0.0414 (6) | |
| H1A | 0.1427 | 0.4860 | 0.3832 | 0.050* | |
| H1B | 0.1304 | 0.3936 | 0.4697 | 0.050* | |
| H1C | 0.1311 | 0.2092 | 0.3953 | 0.050* | |
| O1 | 0.49349 (12) | 0.2376 (5) | 0.60339 (18) | 0.0624 (7) | |
| C1 | 0.40946 (18) | 0.2556 (6) | 0.5644 (2) | 0.0458 (7) | |
| C4 | 0.24232 (16) | 0.3242 (5) | 0.47587 (19) | 0.0366 (6) | |
| C3 | 0.29478 (19) | 0.4801 (6) | 0.4497 (2) | 0.0515 (8) | |
| H3A | 0.2739 | 0.6074 | 0.4021 | 0.062* | |
| C5 | 0.27196 (18) | 0.1368 (7) | 0.5450 (2) | 0.0497 (8) | |
| H5A | 0.2360 | 0.0333 | 0.5625 | 0.060* | |
| C6 | 0.35635 (19) | 0.1007 (7) | 0.5895 (2) | 0.0558 (9) | |
| H6A | 0.3769 | −0.0286 | 0.6364 | 0.067* | |
| C2 | 0.37808 (19) | 0.4465 (7) | 0.4943 (3) | 0.0561 (9) | |
| H2A | 0.4137 | 0.5527 | 0.4773 | 0.067* | |
| C8 | 0.6217 (2) | 0.0478 (10) | 0.6954 (3) | 0.0783 (12) | |
| H8A | 0.6483 | −0.0935 | 0.7380 | 0.117* | |
| H8B | 0.6405 | 0.2108 | 0.7279 | 0.117* | |
| H8C | 0.6347 | 0.0396 | 0.6378 | 0.117* | |
| C7 | 0.5304 (2) | 0.0266 (8) | 0.6678 (3) | 0.0632 (10) | |
| H7A | 0.5107 | −0.1390 | 0.6359 | 0.076* | |
| H7B | 0.5164 | 0.0372 | 0.7254 | 0.076* | |
| O1W | 0.08195 (12) | 0.8613 (5) | 0.44539 (16) | 0.0473 (5) | |
| H1WB | 0.0467 (16) | 0.843 (9) | 0.3908 (11) | 0.086 (15)* | |
| H1WA | 0.071 (2) | 0.856 (9) | 0.4948 (14) | 0.086 (15)* | |
| P1 | 0.11668 (4) | 0.96937 (15) | 0.18642 (5) | 0.0396 (3) | |
| F3 | 0.0519 (7) | 1.103 (3) | 0.2240 (8) | 0.064 (2) | 0.73 (3) |
| F5 | 0.1765 (9) | 0.833 (3) | 0.1430 (10) | 0.065 (2) | 0.73 (3) |
| F4 | 0.0451 (7) | 0.782 (2) | 0.1246 (9) | 0.072 (2) | 0.73 (3) |
| F1 | 0.0911 (6) | 1.1714 (17) | 0.0948 (6) | 0.0618 (15) | 0.73 (3) |
| F2 | 0.1410 (8) | 0.783 (2) | 0.2777 (7) | 0.086 (2) | 0.73 (3) |
| F6 | 0.1869 (6) | 1.169 (2) | 0.2477 (7) | 0.0704 (18) | 0.73 (3) |
| F6' | 0.1908 (13) | 1.081 (6) | 0.2715 (16) | 0.066 (4) | 0.27 (3) |
| F4' | 0.0396 (15) | 0.830 (6) | 0.1040 (17) | 0.053 (4) | 0.27 (3) |
| F2' | 0.1153 (17) | 0.730 (5) | 0.256 (2) | 0.070 (4) | 0.27 (3) |
| F3' | 0.0594 (18) | 1.160 (7) | 0.2229 (19) | 0.056 (4) | 0.27 (3) |
| F5' | 0.184 (3) | 0.796 (8) | 0.164 (3) | 0.062 (4) | 0.27 (3) |
| F1' | 0.1166 (18) | 1.168 (5) | 0.1154 (19) | 0.075 (4) | 0.27 (3) |
| N1 | 0.0383 (13) | 0.0429 (13) | 0.0428 (13) | −0.0011 (11) | 0.0147 (11) | −0.0042 (11) |
| O1 | 0.0333 (11) | 0.0710 (15) | 0.0758 (16) | 0.0024 (11) | 0.0119 (11) | 0.0209 (13) |
| C1 | 0.0335 (14) | 0.0500 (17) | 0.0516 (17) | 0.0022 (13) | 0.0128 (13) | 0.0029 (14) |
| C4 | 0.0337 (14) | 0.0378 (15) | 0.0383 (14) | −0.0002 (12) | 0.0132 (12) | −0.0041 (12) |
| C3 | 0.0425 (16) | 0.0509 (18) | 0.0603 (19) | 0.0031 (14) | 0.0181 (15) | 0.0191 (16) |
| C5 | 0.0406 (17) | 0.0564 (19) | 0.0508 (17) | −0.0050 (15) | 0.0153 (14) | 0.0124 (15) |
| C6 | 0.0443 (18) | 0.060 (2) | 0.0577 (19) | 0.0035 (16) | 0.0128 (15) | 0.0216 (17) |
| C2 | 0.0425 (17) | 0.0553 (19) | 0.073 (2) | −0.0024 (15) | 0.0237 (16) | 0.0172 (17) |
| C8 | 0.045 (2) | 0.108 (3) | 0.071 (3) | 0.018 (2) | 0.0099 (19) | 0.020 (2) |
| C7 | 0.0450 (18) | 0.073 (2) | 0.064 (2) | 0.0094 (18) | 0.0113 (16) | 0.0147 (19) |
| O1W | 0.0395 (12) | 0.0532 (13) | 0.0448 (13) | −0.0011 (10) | 0.0105 (11) | 0.0014 (11) |
| P1 | 0.0366 (4) | 0.0479 (5) | 0.0323 (4) | 0.0065 (3) | 0.0103 (3) | −0.0011 (3) |
| F3 | 0.055 (3) | 0.082 (6) | 0.065 (3) | 0.018 (3) | 0.034 (2) | −0.005 (3) |
| F5 | 0.055 (3) | 0.086 (4) | 0.054 (5) | 0.022 (2) | 0.019 (4) | −0.012 (3) |
| F4 | 0.068 (3) | 0.074 (4) | 0.071 (5) | −0.032 (3) | 0.022 (3) | −0.011 (3) |
| F1 | 0.054 (4) | 0.073 (2) | 0.054 (3) | 0.014 (3) | 0.014 (2) | 0.026 (2) |
| F2 | 0.092 (6) | 0.101 (5) | 0.054 (3) | 0.027 (4) | 0.015 (3) | 0.036 (3) |
| F6 | 0.057 (2) | 0.078 (4) | 0.066 (4) | −0.013 (3) | 0.011 (2) | −0.025 (3) |
| F6' | 0.042 (4) | 0.089 (9) | 0.054 (7) | 0.011 (6) | 0.004 (5) | −0.032 (6) |
| F4' | 0.044 (5) | 0.075 (8) | 0.040 (6) | −0.004 (5) | 0.015 (4) | −0.013 (6) |
| F2' | 0.074 (10) | 0.075 (7) | 0.060 (8) | 0.017 (6) | 0.025 (6) | 0.029 (6) |
| F3' | 0.048 (6) | 0.066 (9) | 0.042 (6) | 0.022 (6) | 0.003 (5) | −0.007 (5) |
| F5' | 0.050 (6) | 0.087 (10) | 0.049 (10) | 0.018 (6) | 0.018 (7) | −0.017 (7) |
| F1' | 0.065 (10) | 0.081 (6) | 0.066 (7) | −0.007 (7) | 0.010 (6) | 0.035 (6) |
| N1—C4 | 1.474 (4) | C8—H8B | 0.9600 |
| N1—H1A | 0.8900 | C8—H8C | 0.9600 |
| N1—H1B | 0.8900 | C7—H7A | 0.9700 |
| N1—H1C | 0.8900 | C7—H7B | 0.9700 |
| O1—C1 | 1.370 (4) | O1W—H1WB | 0.821 (10) |
| O1—C7 | 1.428 (4) | O1W—H1WA | 0.82 (3) |
| C1—C6 | 1.373 (4) | P1—F1' | 1.46 (2) |
| C1—C2 | 1.384 (4) | P1—F6' | 1.546 (18) |
| C4—C5 | 1.358 (4) | P1—F4 | 1.575 (10) |
| C4—C3 | 1.376 (4) | P1—F5 | 1.578 (13) |
| C3—C2 | 1.371 (4) | P1—F2 | 1.580 (8) |
| C3—H3A | 0.9300 | P1—F3 | 1.590 (11) |
| C5—C6 | 1.389 (4) | P1—F6 | 1.598 (7) |
| C5—H5A | 0.9300 | P1—F5' | 1.60 (4) |
| C6—H6A | 0.9300 | P1—F2' | 1.61 (2) |
| C2—H2A | 0.9300 | P1—F4' | 1.61 (3) |
| C8—C7 | 1.500 (5) | P1—F3' | 1.63 (3) |
| C8—H8A | 0.9600 | P1—F1 | 1.632 (7) |
| C4—N1—H1A | 109.5 | F6'—P1—F3 | 92.8 (9) |
| C4—N1—H1B | 109.4 | F4—P1—F3 | 87.1 (6) |
| H1A—N1—H1B | 109.5 | F5—P1—F3 | 176.5 (7) |
| C4—N1—H1C | 109.5 | F2—P1—F3 | 87.9 (6) |
| H1A—N1—H1C | 109.5 | F1'—P1—F6 | 76.1 (9) |
| H1B—N1—H1C | 109.5 | F4—P1—F6 | 177.8 (5) |
| C1—O1—C7 | 118.8 (3) | F5—P1—F6 | 91.6 (8) |
| O1—C1—C6 | 125.2 (3) | F2—P1—F6 | 89.7 (3) |
| O1—C1—C2 | 115.5 (3) | F3—P1—F6 | 91.4 (6) |
| C6—C1—C2 | 119.4 (3) | F1'—P1—F5' | 92.5 (15) |
| C5—C4—C3 | 120.9 (3) | F6'—P1—F5' | 85.2 (18) |
| C5—C4—N1 | 119.7 (3) | F4—P1—F5' | 91.5 (18) |
| C3—C4—N1 | 119.4 (3) | F2—P1—F5' | 81.6 (13) |
| C2—C3—C4 | 119.5 (3) | F3—P1—F5' | 169.4 (13) |
| C2—C3—H3A | 120.2 | F6—P1—F5' | 90.3 (18) |
| C4—C3—H3A | 120.2 | F1'—P1—F2' | 174.5 (15) |
| C4—C5—C6 | 119.6 (3) | F6'—P1—F2' | 88.1 (9) |
| C4—C5—H5A | 120.2 | F4—P1—F2' | 73.3 (9) |
| C6—C5—H5A | 120.2 | F5—P1—F2' | 95.5 (12) |
| C1—C6—C5 | 120.1 (3) | F3—P1—F2' | 85.4 (12) |
| C1—C6—H6A | 119.9 | F6—P1—F2' | 108.2 (8) |
| C5—C6—H6A | 119.9 | F5'—P1—F2' | 84.1 (17) |
| C3—C2—C1 | 120.4 (3) | F1'—P1—F4' | 89.3 (11) |
| C3—C2—H2A | 119.8 | F6'—P1—F4' | 174.7 (12) |
| C1—C2—H2A | 119.8 | F5—P1—F4' | 89.5 (10) |
| C7—C8—H8A | 109.5 | F2—P1—F4' | 105.3 (9) |
| C7—C8—H8B | 109.5 | F3—P1—F4' | 87.1 (10) |
| H8A—C8—H8B | 109.5 | F6—P1—F4' | 164.9 (9) |
| C7—C8—H8C | 109.5 | F5'—P1—F4' | 94.0 (19) |
| H8A—C8—H8C | 109.5 | F2'—P1—F4' | 86.7 (10) |
| H8B—C8—H8C | 109.5 | F1'—P1—F3' | 89.0 (15) |
| O1—C7—C8 | 107.4 (3) | F6'—P1—F3' | 86.7 (13) |
| O1—C7—H7A | 110.2 | F4—P1—F3' | 96.0 (12) |
| C8—C7—H7A | 110.2 | F5—P1—F3' | 169.1 (14) |
| O1—C7—H7B | 110.2 | F2—P1—F3' | 94.9 (12) |
| C8—C7—H7B | 110.2 | F6—P1—F3' | 82.3 (12) |
| H7A—C7—H7B | 108.5 | F5'—P1—F3' | 171.8 (19) |
| H1WB—O1W—H1WA | 122 (2) | F2'—P1—F3' | 94.9 (17) |
| F1'—P1—F6' | 96.0 (11) | F4'—P1—F3' | 94.1 (14) |
| F1'—P1—F4 | 102.6 (9) | F6'—P1—F1 | 109.3 (11) |
| F6'—P1—F4 | 161.3 (10) | F4—P1—F1 | 89.4 (4) |
| F1'—P1—F5 | 80.8 (12) | F5—P1—F1 | 87.8 (5) |
| F6'—P1—F5 | 90.7 (10) | F2—P1—F1 | 177.8 (5) |
| F4—P1—F5 | 89.9 (8) | F3—P1—F1 | 90.3 (5) |
| F1'—P1—F2 | 164.6 (8) | F6—P1—F1 | 89.0 (3) |
| F6'—P1—F2 | 69.4 (10) | F5'—P1—F1 | 100.2 (13) |
| F4—P1—F2 | 91.9 (4) | F2'—P1—F1 | 162.3 (8) |
| F5—P1—F2 | 94.0 (6) | F4'—P1—F1 | 75.9 (10) |
| F1'—P1—F3 | 98.1 (12) | F3'—P1—F1 | 83.1 (11) |
| C7—O1—C1—C6 | 6.9 (5) | C2—C1—C6—C5 | −0.3 (5) |
| C7—O1—C1—C2 | −172.9 (3) | C4—C5—C6—C1 | 0.7 (5) |
| C5—C4—C3—C2 | −0.2 (5) | C4—C3—C2—C1 | 0.7 (5) |
| N1—C4—C3—C2 | −178.5 (3) | O1—C1—C2—C3 | 179.3 (3) |
| C3—C4—C5—C6 | −0.5 (5) | C6—C1—C2—C3 | −0.4 (5) |
| N1—C4—C5—C6 | 177.8 (3) | C1—O1—C7—C8 | 177.4 (3) |
| O1—C1—C6—C5 | 180.0 (3) |
| Cg1 is the centroid of the C1–C6 ring. |
| H··· | ||||
| N1—H1A···F2' | 0.89 | 2.16 | 3.03 (2) | 167 |
| N1—H1A···F2 | 0.89 | 2.17 | 3.049 (10) | 169 |
| N1—H1B···F1i | 0.89 | 2.22 | 3.066 (8) | 158 |
| N1—H1B···F1'i | 0.89 | 2.28 | 3.09 (3) | 152 |
| N1—H1C···O1Wii | 0.89 | 2.22 | 2.883 (3) | 131 |
| N1—H1C···F3ii | 0.89 | 2.46 | 3.137 (12) | 133 |
| N1—H1C···F3'ii | 0.89 | 2.40 | 3.01 (3) | 126 |
| N1—H1C···F6'ii | 0.89 | 2.51 | 2.96 (2) | 112 |
| O1W—H1WB···F3'iii | 0.82 (1) | 2.20 (3) | 2.97 (3) | 156 (4) |
| O1W—H1WB···F3iii | 0.82 (1) | 2.28 (3) | 3.030 (12) | 152 (4) |
| O1W—H1WA···F4i | 0.82 (3) | 2.24 (2) | 3.040 (12) | 164 (4) |
| O1W—H1WA···F4'i | 0.82 (3) | 2.11 (3) | 2.88 (2) | 155 (4) |
| O1W—H1WA···F5i | 0.82 (3) | 2.48 (4) | 2.951 (16) | 117 (3) |
| C8—H8C···Cg1iv | 0.96 | 3.16 | 4.023 (5) | 150 |
Hydrogen-bond geometry (Å, °)
Cg1 is the centroid of the C1–C6 ring.
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.89 | 2.16 | 3.03 (2) | 167 |
| N1—H1 | 0.89 | 2.17 | 3.049 (10) | 169 |
| N1—H1 | 0.89 | 2.22 | 3.066 (8) | 158 |
| N1—H1 | 0.89 | 2.28 | 3.09 (3) | 152 |
| N1—H1 | 0.89 | 2.22 | 2.883 (3) | 131 |
| N1—H1 | 0.89 | 2.46 | 3.137 (12) | 133 |
| N1—H1 | 0.89 | 2.40 | 3.01 (3) | 126 |
| N1—H1 | 0.89 | 2.51 | 2.96 (2) | 112 |
| O1 | 0.82 (1) | 2.20 (3) | 2.97 (3) | 156 (4) |
| O1 | 0.82 (1) | 2.28 (3) | 3.030 (12) | 152 (4) |
| O1 | 0.82 (3) | 2.24 (2) | 3.040 (12) | 164 (4) |
| O1 | 0.82 (3) | 2.11 (3) | 2.88 (2) | 155 (4) |
| O1 | 0.82 (3) | 2.48 (4) | 2.951 (16) | 117 (3) |
| C8—H8 | 0.96 | 3.16 | 4.023 (5) | 150 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .