Literature DB >> 21579526

Ethyl 2-{3-[(2-chloro-1,3-thia-zol-5-yl)meth-yl]-4-nitro-imino-1,3,5-triazinan-1-yl}acetate.

Chuan-Wen Sun1, Jun Zhu, Jia Jin, Ding-Rong Yang.   

Abstract

In the title compound, C(11)H(15)ClN(6)O(4)S, which belongs to the neonicotinoid class of insecticidally active heterocyclic compounds, the six-membered triazine ring adopts an opened envolope conformation. The planar nitro imine group [dihedral angle between nitro and imine groups = 1.07 (7)°] and the thia-zole ring are oriented at a dihedral angle of 69.62 (8)°. A classical intra-molecular N-H⋯O hydrogen bond is found in the mol-ecular structure. Moreover, one classical inter-molecular N-H⋯N and four non-classical C-H⋯O and C-H⋯N hydrogen bonds are also present in the crystal structure. Besides inter-molecular hydrogen bonds, the Cl atom forms an inter-molecular short contact [3.020 (2) Å] with one of the nitro O atoms.

Entities:  

Year:  2010        PMID: 21579526      PMCID: PMC2979404          DOI: 10.1107/S1600536810018878

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to neonicotinoid compounds and their application as insecticides, see: Kagabu (1996 ▶); Kagabu et al. (2005 ▶); Tian et al. (2007 ▶); Tomizawa et al. (2000 ▶); Tomizawa & Yamamoto (1993 ▶); Zhang et al. (2004 ▶). For halogen bonding, see: Riley & Merz (2007 ▶). For the synthesis of the title compound, see: Maienfisch et al. (2001 ▶).

Experimental

Crystal data

C11H15ClN6O4S M = 362.81 Triclinic, a = 8.5066 (6) Å b = 9.1114 (7) Å c = 10.9071 (8) Å α = 100.488 (2)° β = 98.416 (3)° γ = 101.281 (3)° V = 800.55 (10) Å3 Z = 2 Mo Kα radiation μ = 0.40 mm−1 T = 298 K 0.40 × 0.23 × 0.20 mm

Data collection

Bruker SMART APEX CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2000 ▶) T min = 0.857, T max = 0.925 5350 measured reflections 3259 independent reflections 2670 reflections with I > 2σ(I) R int = 0.075

Refinement

R[F 2 > 2σ(F 2)] = 0.047 wR(F 2) = 0.128 S = 1.05 3259 reflections 212 parameters 9 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.31 e Å−3 Δρmin = −0.26 e Å−3 Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: PLATON. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810018878/rk2201sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810018878/rk2201Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H15ClN6O4SZ = 2
Mr = 362.81F(000) = 376
Triclinic, P1Dx = 1.505 Mg m3
Hall symbol: -P 1Melting point: 449 K
a = 8.5066 (6) ÅMo Kα radiation, λ = 0.71073 Å
b = 9.1114 (7) ÅCell parameters from 2512 reflections
c = 10.9071 (8) Åθ = 2.3–28.2°
α = 100.488 (2)°µ = 0.40 mm1
β = 98.416 (3)°T = 298 K
γ = 101.281 (3)°Block, colourless
V = 800.55 (10) Å30.40 × 0.23 × 0.20 mm
Bruker SMART APEX CCD area-detector diffractometer3259 independent reflections
Radiation source: fine focus sealed Siemens Mo tube2670 reflections with I > 2σ(I)
graphiteRint = 0.075
Detector resolution: 1.57 × 0.49 mm pixels mm-1θmax = 26.5°, θmin = 1.9°
0.3° wide ω scansh = −10→9
Absorption correction: multi-scan (SADABS; Bruker, 2000)k = −10→11
Tmin = 0.857, Tmax = 0.925l = −13→12
5350 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.047Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.128H atoms treated by a mixture of independent and constrained refinement
S = 1.05w = 1/[σ2(Fo2) + (0.0598P)2 + 0.0779P] where P = (Fo2 + 2Fc2)/3
3259 reflections(Δ/σ)max < 0.001
212 parametersΔρmax = 0.31 e Å3
9 restraintsΔρmin = −0.26 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
xyzUiso*/Ueq
C1−0.0095 (3)0.7149 (2)0.26414 (19)0.0444 (5)
H1A0.08800.70300.23090.053*
H1B−0.07510.75740.20540.053*
C2−0.1049 (2)0.5590 (2)0.2702 (2)0.0454 (5)
C3−0.2096 (4)0.3054 (3)0.1509 (3)0.0701 (7)
H3C−0.31890.30310.16740.084*
H3B−0.15260.26050.21280.084*
C4−0.2173 (5)0.2185 (3)0.0216 (3)0.0943 (11)
H4A−0.26470.2692−0.03910.141*
H4B−0.28310.11690.01050.141*
H4C−0.10910.21260.00920.141*
C50.1108 (3)0.9754 (2)0.3748 (2)0.0485 (5)
H5A0.12251.04690.45490.058*
H5B0.03971.00590.31080.058*
C60.1510 (2)0.7783 (2)0.47718 (18)0.0405 (4)
H6A0.10790.67340.48250.049*
H6B0.16190.84350.56030.049*
C70.3648 (2)0.88803 (19)0.36999 (17)0.0337 (4)
C80.4008 (2)0.6726 (2)0.46817 (19)0.0408 (4)
H8A0.37750.64400.54620.049*
H8B0.51740.71460.48050.049*
C90.3537 (2)0.5325 (2)0.36264 (18)0.0399 (4)
C100.2576 (3)0.3953 (2)0.3607 (2)0.0468 (5)
H100.21130.37680.43020.056*
C110.3072 (3)0.3403 (2)0.1709 (2)0.0527 (6)
Cl10.30601 (10)0.23735 (8)0.02224 (6)0.0779 (3)
N10.03775 (19)0.82249 (18)0.38653 (16)0.0408 (4)
N20.31341 (19)0.79068 (17)0.44198 (15)0.0367 (4)
N30.2716 (2)0.98200 (18)0.33909 (17)0.0393 (4)
H3A0.306 (3)1.039 (3)0.297 (2)0.047*
N40.50886 (19)0.87424 (18)0.33519 (16)0.0402 (4)
N50.5757 (2)0.97002 (19)0.26754 (16)0.0430 (4)
N60.2308 (2)0.28347 (19)0.25118 (19)0.0544 (5)
O1−0.1559 (2)0.52487 (19)0.36034 (15)0.0659 (5)
O2−0.1227 (2)0.46316 (17)0.16030 (15)0.0614 (4)
O30.5158 (2)1.0752 (2)0.23700 (19)0.0671 (5)
O40.70673 (19)0.95104 (19)0.23875 (17)0.0607 (4)
S10.41711 (8)0.52681 (6)0.21876 (5)0.0532 (2)
U11U22U33U12U13U23
C10.0449 (11)0.0457 (11)0.0389 (10)0.0019 (9)0.0037 (9)0.0122 (9)
C20.0434 (11)0.0495 (12)0.0386 (11)0.0005 (9)0.0066 (9)0.0095 (9)
C30.0903 (19)0.0483 (12)0.0592 (14)−0.0107 (12)0.0183 (13)0.0055 (11)
C40.144 (3)0.0561 (15)0.0660 (17)−0.0045 (17)0.0236 (19)−0.0031 (12)
C50.0451 (11)0.0377 (10)0.0671 (14)0.0144 (8)0.0191 (10)0.0106 (10)
C60.0430 (10)0.0429 (10)0.0331 (10)0.0067 (8)0.0087 (8)0.0037 (8)
C70.0379 (9)0.0256 (8)0.0336 (9)0.0057 (7)0.0040 (7)−0.0001 (7)
C80.0473 (11)0.0370 (10)0.0389 (10)0.0130 (8)0.0030 (8)0.0106 (8)
C90.0479 (11)0.0363 (10)0.0398 (10)0.0176 (8)0.0065 (8)0.0118 (8)
C100.0590 (13)0.0391 (11)0.0460 (12)0.0163 (9)0.0105 (10)0.0122 (9)
C110.0731 (15)0.0436 (11)0.0427 (11)0.0274 (10)0.0013 (11)0.0048 (10)
Cl10.1162 (6)0.0694 (4)0.0455 (3)0.0420 (4)0.0031 (3)−0.0065 (3)
N10.0398 (9)0.0382 (8)0.0447 (9)0.0101 (7)0.0090 (7)0.0074 (7)
N20.0405 (8)0.0318 (8)0.0385 (8)0.0098 (6)0.0071 (7)0.0080 (7)
N30.0416 (9)0.0306 (8)0.0499 (10)0.0112 (6)0.0133 (7)0.0124 (7)
N40.0375 (8)0.0364 (8)0.0468 (9)0.0082 (6)0.0106 (7)0.0075 (7)
N50.0401 (9)0.0421 (9)0.0407 (9)0.0023 (7)0.0079 (7)0.0009 (7)
N60.0704 (12)0.0356 (9)0.0545 (11)0.0156 (8)0.0039 (10)0.0053 (8)
O10.0766 (11)0.0650 (10)0.0453 (9)−0.0146 (8)0.0207 (8)0.0100 (8)
O20.0806 (11)0.0484 (9)0.0455 (9)−0.0096 (8)0.0202 (8)0.0055 (7)
O30.0612 (10)0.0647 (11)0.0929 (14)0.0183 (8)0.0302 (9)0.0448 (10)
O40.0468 (9)0.0706 (11)0.0654 (10)0.0116 (7)0.0249 (8)0.0070 (8)
S10.0731 (4)0.0452 (3)0.0456 (3)0.0181 (3)0.0187 (3)0.0098 (2)
C1—N11.455 (3)C6—H6B0.9700
C1—C21.510 (3)C7—N31.329 (2)
C1—H1A0.9700C7—N21.340 (2)
C1—H1B0.9700C7—N41.357 (2)
C2—O11.198 (2)C8—N21.468 (2)
C2—O21.318 (3)C8—C91.498 (3)
C3—O21.460 (3)C8—H8A0.9700
C3—C41.472 (4)C8—H8B0.9700
C3—H3C0.9700C9—C101.348 (3)
C3—H3B0.9700C9—S11.728 (2)
C4—H4A0.9600C10—N61.380 (3)
C4—H4B0.9600C10—H100.9300
C4—H4C0.9600C11—N61.287 (3)
C5—N11.447 (2)C11—S11.717 (2)
C5—N31.469 (3)C11—Cl11.717 (2)
C5—H5A0.9700N3—H3A0.79 (2)
C5—H5B0.9700N4—N51.339 (2)
C6—N11.444 (3)N5—O41.237 (2)
C6—N21.476 (2)N5—O31.243 (2)
C6—H6A0.9700
N1—C1—C2113.48 (16)N3—C7—N4127.89 (17)
N1—C1—H1A108.9N2—C7—N4113.62 (16)
C2—C1—H1A108.9N2—C8—C9112.19 (16)
N1—C1—H1B108.9N2—C8—H8A109.2
C2—C1—H1B108.9C9—C8—H8A109.2
H1A—C1—H1B107.7N2—C8—H8B109.2
O1—C2—O2124.32 (19)C9—C8—H8B109.2
O1—C2—C1126.2 (2)H8A—C8—H8B107.9
O2—C2—C1109.47 (17)C10—C9—C8127.86 (19)
O2—C3—C4108.0 (2)C10—C9—S1109.13 (15)
O2—C3—H3C110.1C8—C9—S1123.00 (14)
C4—C3—H3C110.1C9—C10—N6117.05 (19)
O2—C3—H3B110.1C9—C10—H10121.5
C4—C3—H3B110.1N6—C10—H10121.5
H3C—C3—H3B108.4N6—C11—S1117.24 (17)
C3—C4—H4A109.5N6—C11—Cl1123.01 (18)
C3—C4—H4B109.5S1—C11—Cl1119.74 (15)
H4A—C4—H4B109.5C6—N1—C5107.68 (16)
C3—C4—H4C109.5C6—N1—C1113.41 (16)
H4A—C4—H4C109.5C5—N1—C1111.93 (16)
H4B—C4—H4C109.5C7—N2—C8121.33 (16)
N1—C5—N3111.07 (15)C7—N2—C6120.93 (15)
N1—C5—H5A109.4C8—N2—C6116.72 (15)
N3—C5—H5A109.4C7—N3—C5122.00 (17)
N1—C5—H5B109.4C7—N3—H3A115.8 (16)
N3—C5—H5B109.4C5—N3—H3A122.2 (16)
H5A—C5—H5B108.0N5—N4—C7118.95 (16)
N1—C6—N2112.02 (15)O4—N5—O3120.48 (17)
N1—C6—H6A109.2O4—N5—N4115.65 (17)
N2—C6—H6A109.2O3—N5—N4123.84 (16)
N1—C6—H6B109.2C11—N6—C10108.32 (18)
N2—C6—H6B109.2C2—O2—C3116.56 (17)
H6A—C6—H6B107.9C11—S1—C988.24 (10)
N3—C7—N2118.48 (17)
N1—C1—C2—O17.9 (3)N1—C6—N2—C8−143.03 (17)
N1—C1—C2—O2−171.21 (18)N2—C7—N3—C5−3.8 (3)
N2—C8—C9—C10−105.2 (2)N4—C7—N3—C5174.62 (18)
N2—C8—C9—S173.8 (2)N1—C5—N3—C7−28.0 (3)
C8—C9—C10—N6179.47 (18)N3—C7—N4—N54.3 (3)
S1—C9—C10—N60.3 (2)N2—C7—N4—N5−177.22 (16)
N2—C6—N1—C5−55.1 (2)C7—N4—N5—O4−179.85 (17)
N2—C6—N1—C169.28 (19)C7—N4—N5—O32.1 (3)
N3—C5—N1—C656.0 (2)S1—C11—N6—C100.8 (2)
N3—C5—N1—C1−69.3 (2)Cl1—C11—N6—C10179.62 (16)
C2—C1—N1—C665.1 (2)C9—C10—N6—C11−0.7 (3)
C2—C1—N1—C5−172.82 (16)O1—C2—O2—C3−0.5 (4)
N3—C7—N2—C8173.29 (16)C1—C2—O2—C3178.7 (2)
N4—C7—N2—C8−5.4 (2)C4—C3—O2—C2179.5 (2)
N3—C7—N2—C65.2 (3)N6—C11—S1—C9−0.57 (19)
N4—C7—N2—C6−173.49 (16)Cl1—C11—S1—C9−179.41 (14)
C9—C8—N2—C7−82.8 (2)C10—C9—S1—C110.11 (16)
C9—C8—N2—C685.8 (2)C8—C9—S1—C11−179.09 (17)
N1—C6—N2—C725.6 (2)
D—H···AD—HH···AD···AD—H···A
N3—H3A···N6i0.79 (2)2.55 (2)3.133 (2)132 (2)
N3—H3A···O30.79 (2)1.98 (2)2.570 (2)131 (2)
C3—H3C···O3ii0.972.573.191 (3)122
C5—H5A···N1iii0.972.613.449 (3)144
C6—H6B···O4iv0.972.563.478 (3)159
C10—H10···O1v0.932.453.278 (3)149
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N3—H3A⋯N6i0.79 (2)2.55 (2)3.133 (2)132 (2)
N3—H3A⋯O30.79 (2)1.98 (2)2.570 (2)131 (2)
C3—H3C⋯O3ii0.972.573.191 (3)122
C5—H5A⋯N1iii0.972.613.449 (3)144
C6—H6B⋯O4iv0.972.563.478 (3)159
C10—H10⋯O1v0.932.453.278 (3)149

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

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