| Literature DB >> 21579521 |
Gilberto A Romeiro, Carlos M R Ribeiro, Solange M S V Wardell, James L Wardell, Seik Weng Ng, Edward R T Tiekink.
Abstract
The title mol-ecule, C(12)H(11)N(3)O(4), is essentially planar, the r.m.s. deviation for all non-Entities:
Year: 2010 PMID: 21579521 PMCID: PMC2979566 DOI: 10.1107/S1600536810018635
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H11N3O4 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 2714 reflections |
| θ = 2.9–27.5° | |
| µ = 0.12 mm−1 | |
| β = 106.661 (2)° | Block, red |
| 0.42 × 0.38 × 0.22 mm | |
| Nonius KappaCCD area-detector diffractometer | 2581 independent reflections |
| Radiation source: Enraf Nonius FR591 rotating anode | 2030 reflections with |
| 10 cm confocal mirrors | |
| Detector resolution: 9.091 pixels mm-1 | θmax = 27.4°, θmin = 3.1° |
| φ and ω scans | |
| Absorption correction: multi-scan ( | |
| 14210 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max = 0.001 | |
| 2581 reflections | Δρmax = 0.33 e Å−3 |
| 176 parameters | Δρmin = −0.30 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.018 (5) |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.3806 (2) | 0.5986 (2) | 0.33548 (17) | 0.0197 (5) | |
| O2 | 0.2556 (3) | 0.4481 (2) | 0.20576 (17) | 0.0239 (6) | |
| O3 | 0.8419 (3) | 1.1001 (3) | 0.6327 (2) | 0.0324 (6) | |
| O4 | 0.7443 (3) | 1.0746 (3) | 0.76142 (19) | 0.0307 (6) | |
| N1 | 0.2875 (3) | 0.5457 (3) | 0.4711 (2) | 0.0180 (6) | |
| N2 | 0.0528 (3) | 0.3059 (3) | 0.4441 (2) | 0.0203 (6) | |
| N3 | 0.7556 (3) | 1.0430 (3) | 0.6733 (2) | 0.0209 (6) | |
| C1 | 0.3786 (3) | 0.6220 (3) | 0.4393 (2) | 0.0166 (6) | |
| C2 | 0.2186 (3) | 0.4617 (3) | 0.3831 (2) | 0.0179 (6) | |
| C3 | 0.2761 (3) | 0.4921 (3) | 0.2958 (2) | 0.0195 (7) | |
| C4 | 0.1130 (3) | 0.3590 (3) | 0.3735 (2) | 0.0189 (7) | |
| H4 | 0.0778 | 0.3199 | 0.3038 | 0.023* | |
| C5 | 0.0939 (4) | 0.3462 (4) | 0.5569 (3) | 0.0237 (7) | |
| H5A | 0.1378 | 0.2655 | 0.6012 | 0.036* | |
| H5B | 0.0066 | 0.3768 | 0.5761 | 0.036* | |
| H5C | 0.1649 | 0.4233 | 0.5691 | 0.036* | |
| C6 | −0.0548 (4) | 0.1947 (4) | 0.4138 (3) | 0.0284 (8) | |
| H6A | −0.0780 | 0.1778 | 0.3366 | 0.043* | |
| H6B | −0.1440 | 0.2223 | 0.4317 | 0.043* | |
| H6C | −0.0152 | 0.1086 | 0.4526 | 0.043* | |
| C7 | 0.4765 (3) | 0.7290 (3) | 0.4994 (2) | 0.0168 (6) | |
| C8 | 0.4797 (3) | 0.7571 (3) | 0.6051 (2) | 0.0184 (6) | |
| H8 | 0.4184 | 0.7056 | 0.6375 | 0.022* | |
| C9 | 0.5715 (3) | 0.8590 (3) | 0.6624 (2) | 0.0185 (6) | |
| H9 | 0.5735 | 0.8794 | 0.7342 | 0.022* | |
| C10 | 0.6608 (3) | 0.9314 (3) | 0.6135 (2) | 0.0178 (6) | |
| C11 | 0.6608 (3) | 0.9058 (3) | 0.5089 (2) | 0.0173 (6) | |
| H11 | 0.7231 | 0.9571 | 0.4772 | 0.021* | |
| C12 | 0.5676 (3) | 0.8035 (3) | 0.4519 (2) | 0.0175 (6) | |
| H12 | 0.5655 | 0.7838 | 0.3800 | 0.021* |
| O1 | 0.0239 (12) | 0.0203 (11) | 0.0177 (11) | −0.0022 (9) | 0.0105 (9) | −0.0010 (8) |
| O2 | 0.0307 (13) | 0.0242 (12) | 0.0187 (11) | −0.0017 (10) | 0.0100 (10) | −0.0029 (9) |
| O3 | 0.0323 (14) | 0.0382 (15) | 0.0291 (13) | −0.0147 (12) | 0.0127 (11) | −0.0044 (11) |
| O4 | 0.0397 (15) | 0.0328 (14) | 0.0219 (12) | −0.0061 (12) | 0.0125 (11) | −0.0075 (10) |
| N1 | 0.0195 (13) | 0.0171 (12) | 0.0183 (13) | 0.0003 (10) | 0.0067 (10) | 0.0004 (10) |
| N2 | 0.0209 (13) | 0.0163 (13) | 0.0248 (13) | 0.0015 (11) | 0.0082 (11) | 0.0025 (10) |
| N3 | 0.0219 (13) | 0.0210 (13) | 0.0195 (13) | 0.0017 (12) | 0.0056 (11) | 0.0024 (11) |
| C1 | 0.0193 (14) | 0.0179 (14) | 0.0143 (13) | 0.0046 (12) | 0.0073 (11) | 0.0029 (11) |
| C2 | 0.0198 (15) | 0.0172 (14) | 0.0173 (14) | 0.0032 (12) | 0.0065 (12) | 0.0009 (11) |
| C3 | 0.0218 (15) | 0.0165 (14) | 0.0207 (15) | 0.0022 (12) | 0.0068 (12) | 0.0030 (12) |
| C4 | 0.0222 (16) | 0.0156 (14) | 0.0198 (15) | 0.0042 (12) | 0.0076 (12) | 0.0024 (11) |
| C5 | 0.0270 (17) | 0.0235 (16) | 0.0246 (16) | 0.0024 (14) | 0.0136 (14) | 0.0033 (13) |
| C6 | 0.0247 (17) | 0.0210 (16) | 0.039 (2) | −0.0050 (14) | 0.0077 (15) | 0.0059 (14) |
| C7 | 0.0182 (15) | 0.0145 (14) | 0.0185 (14) | 0.0035 (12) | 0.0062 (12) | 0.0022 (11) |
| C8 | 0.0201 (15) | 0.0188 (15) | 0.0184 (14) | 0.0018 (12) | 0.0089 (12) | 0.0040 (12) |
| C9 | 0.0215 (15) | 0.0193 (15) | 0.0158 (13) | 0.0052 (13) | 0.0070 (12) | 0.0030 (12) |
| C10 | 0.0174 (14) | 0.0152 (14) | 0.0198 (15) | 0.0025 (12) | 0.0036 (12) | −0.0005 (11) |
| C11 | 0.0180 (14) | 0.0175 (14) | 0.0178 (14) | 0.0023 (12) | 0.0073 (11) | 0.0035 (11) |
| C12 | 0.0193 (14) | 0.0184 (14) | 0.0169 (14) | 0.0029 (12) | 0.0086 (12) | 0.0014 (11) |
| O1—C1 | 1.377 (3) | C5—H5B | 0.9800 |
| O1—C3 | 1.411 (4) | C5—H5C | 0.9800 |
| O2—C3 | 1.209 (4) | C6—H6A | 0.9800 |
| O3—N3 | 1.226 (4) | C6—H6B | 0.9800 |
| O4—N3 | 1.222 (4) | C6—H6C | 0.9800 |
| N1—C1 | 1.289 (4) | C7—C8 | 1.394 (4) |
| N1—C2 | 1.398 (4) | C7—C12 | 1.396 (4) |
| N2—C4 | 1.317 (4) | C8—C9 | 1.375 (4) |
| N2—C6 | 1.448 (4) | C8—H8 | 0.9500 |
| N2—C5 | 1.460 (4) | C9—C10 | 1.385 (4) |
| N3—C10 | 1.466 (4) | C9—H9 | 0.9500 |
| C1—C7 | 1.450 (4) | C10—C11 | 1.385 (4) |
| C2—C4 | 1.382 (5) | C11—C12 | 1.383 (4) |
| C2—C3 | 1.428 (4) | C11—H11 | 0.9500 |
| C4—H4 | 0.9500 | C12—H12 | 0.9500 |
| C5—H5A | 0.9800 | ||
| C1—O1—C3 | 105.6 (2) | H5B—C5—H5C | 109.5 |
| C1—N1—C2 | 105.0 (2) | N2—C6—H6A | 109.5 |
| C4—N2—C6 | 120.5 (3) | N2—C6—H6B | 109.5 |
| C4—N2—C5 | 123.9 (3) | H6A—C6—H6B | 109.5 |
| C6—N2—C5 | 115.5 (3) | N2—C6—H6C | 109.5 |
| O4—N3—O3 | 123.2 (3) | H6A—C6—H6C | 109.5 |
| O4—N3—C10 | 118.1 (3) | H6B—C6—H6C | 109.5 |
| O3—N3—C10 | 118.7 (3) | C8—C7—C12 | 120.0 (3) |
| N1—C1—O1 | 115.2 (3) | C8—C7—C1 | 119.8 (3) |
| N1—C1—C7 | 127.6 (3) | C12—C7—C1 | 120.2 (3) |
| O1—C1—C7 | 117.2 (3) | C9—C8—C7 | 120.2 (3) |
| C4—C2—N1 | 129.6 (3) | C9—C8—H8 | 119.9 |
| C4—C2—C3 | 120.5 (3) | C7—C8—H8 | 119.9 |
| N1—C2—C3 | 109.9 (3) | C8—C9—C10 | 118.7 (3) |
| O2—C3—O1 | 120.4 (3) | C8—C9—H9 | 120.7 |
| O2—C3—C2 | 135.4 (3) | C10—C9—H9 | 120.7 |
| O1—C3—C2 | 104.3 (2) | C11—C10—C9 | 122.7 (3) |
| N2—C4—C2 | 131.3 (3) | C11—C10—N3 | 118.5 (3) |
| N2—C4—H4 | 114.4 | C9—C10—N3 | 118.8 (3) |
| C2—C4—H4 | 114.4 | C12—C11—C10 | 118.1 (3) |
| N2—C5—H5A | 109.5 | C12—C11—H11 | 120.9 |
| N2—C5—H5B | 109.5 | C10—C11—H11 | 120.9 |
| H5A—C5—H5B | 109.5 | C11—C12—C7 | 120.4 (3) |
| N2—C5—H5C | 109.5 | C11—C12—H12 | 119.8 |
| H5A—C5—H5C | 109.5 | C7—C12—H12 | 119.8 |
| C2—N1—C1—O1 | −0.3 (3) | O1—C1—C7—C8 | −179.8 (3) |
| C2—N1—C1—C7 | 179.1 (3) | N1—C1—C7—C12 | −179.3 (3) |
| C3—O1—C1—N1 | −0.1 (3) | O1—C1—C7—C12 | 0.1 (4) |
| C3—O1—C1—C7 | −179.5 (3) | C12—C7—C8—C9 | 0.6 (5) |
| C1—N1—C2—C4 | 178.8 (3) | C1—C7—C8—C9 | −179.5 (3) |
| C1—N1—C2—C3 | 0.5 (3) | C7—C8—C9—C10 | −0.7 (5) |
| C1—O1—C3—O2 | −178.9 (3) | C8—C9—C10—C11 | 0.4 (5) |
| C1—O1—C3—C2 | 0.4 (3) | C8—C9—C10—N3 | 178.2 (3) |
| C4—C2—C3—O2 | 0.1 (6) | O4—N3—C10—C11 | 172.7 (3) |
| N1—C2—C3—O2 | 178.6 (4) | O3—N3—C10—C11 | −7.1 (4) |
| C4—C2—C3—O1 | −179.1 (3) | O4—N3—C10—C9 | −5.1 (4) |
| N1—C2—C3—O1 | −0.6 (3) | O3—N3—C10—C9 | 175.0 (3) |
| C6—N2—C4—C2 | −178.4 (3) | C9—C10—C11—C12 | −0.1 (5) |
| C5—N2—C4—C2 | −2.4 (5) | N3—C10—C11—C12 | −177.9 (3) |
| N1—C2—C4—N2 | −3.9 (6) | C10—C11—C12—C7 | 0.1 (4) |
| C3—C2—C4—N2 | 174.2 (3) | C8—C7—C12—C11 | −0.3 (4) |
| N1—C1—C7—C8 | 0.9 (5) | C1—C7—C12—C11 | 179.8 (3) |
| H··· | ||||
| C5—H5c···N1 | 0.98 | 2.28 | 3.074 (5) | 137 |
| C5—H5a···O2i | 0.98 | 2.53 | 3.504 (4) | 177 |
| C5—H5c···O4ii | 0.98 | 2.57 | 3.259 (5) | 127 |
| C9—H9···O1iii | 0.95 | 2.56 | 3.304 (4) | 135 |
| C11—H11···O2iv | 0.95 | 2.45 | 3.144 (4) | 130 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C5—H5c⋯N1 | 0.98 | 2.28 | 3.074 (5) | 137 |
| C5—H5a⋯O2i | 0.98 | 2.53 | 3.504 (4) | 177 |
| C5—H5c⋯O4ii | 0.98 | 2.57 | 3.259 (5) | 127 |
| C9—H9⋯O1iii | 0.95 | 2.56 | 3.304 (4) | 135 |
| C11—H11⋯O2iv | 0.95 | 2.45 | 3.144 (4) | 130 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .