Literature DB >> 21579515

2-[(2-Carboxy-phen-yl)disulfan-yl]benzoic acid-4,4'-bipyridyl N,N'-dioxide (1/2).

Rodolfo Moreno-Fuquen, Javier Ellena, Carlos A De Simone, Leandro Ribeiro, Regina Helena De Almeida Santos.   

Abstract

In the title 2:1 adduct, C(14)H(10)O(4)S(2)·0.5C(10)H(8)N(2)O(2), which arose from an unexpected oxidation of a precursor, the dihedral angle between the aromatic rings in the disulfide is 82.51 (11)°. In the crystal, the molecules are linked by O-H⋯O, O-H⋯N and C-H⋯O interactions, generating sheets.

Entities:  

Year:  2010        PMID: 21579515      PMCID: PMC2979473          DOI: 10.1107/S1600536810018775

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For structural studies of 4,4′-bipyridyl N,N′-dioxide, see: Lou & Huang (2007 ▶); Reddy et al. (2006 ▶). For the disulfide bond in polypeptide chains, see: Gortner & Hoffman (1941 ▶). For a related structure, see: Moreno-Fuquen et al. (2003 ▶). For hydrogen bonding, see: Etter (1990 ▶); Nardelli (1995 ▶).

Experimental

Crystal data

C14H10O4S2·0.5C10H8N2O2 M = 400.45 Monoclinic, a = 21.314 (2) Å b = 10.5621 (8) Å c = 16.005 (8) Å β = 105.412 (8)° V = 3473.5 (18) Å3 Z = 8 Mo Kα radiation μ = 0.34 mm−1 T = 291 K 0.22 × 0.18 × 0.12 mm

Data collection

Rigaku AFC-7S diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.951, T max = 0.990 3066 measured reflections 2781 independent reflections 2658 reflections with I > 2σ(I) R int = 0.046 3 standard reflections every 120 min intensity decay: 0.9%

Refinement

R[F 2 > 2σ(F 2)] = 0.065 wR(F 2) = 0.192 S = 1.11 2781 reflections 244 parameters H-atom parameters constrained Δρmax = 0.74 e Å−3 Δρmin = −0.47 e Å−3 Data collection: MSC/AFC Diffractometer Control Software (Molecular Structure Corporation, 1993 ▶); cell refinement: MSC/AFC Diffractometer Control Software; data reduction: TEXSAN (Molecular Structure Corporation, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and Mercury (Macrae et al., 2006 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810018775/hg2676sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810018775/hg2676Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H10O4S2·0.5C10H8N2O2F(000) = 1656
Mr = 400.45Dx = 1.532 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -c 2ycCell parameters from 25 reflections
a = 21.314 (2) Åθ = 10.3–19.1°
b = 10.5621 (8) ŵ = 0.34 mm1
c = 16.005 (8) ÅT = 291 K
β = 105.412 (8)°Prism, pale-yellow
V = 3473.5 (18) Å30.22 × 0.18 × 0.12 mm
Z = 8
Rigaku AFC-7S diffractometer2658 reflections with I > 2σ(I)
Radiation source: fine-focus sealed X-ray tubeRint = 0.046
graphiteθmax = 25.1°, θmin = 2.0°
ω/2θ scansh = −25→24
Absorption correction: ψ scan (North et al., 1968)k = 0→12
Tmin = 0.951, Tmax = 0.990l = 0→19
3066 measured reflections3 standard reflections every 120 min
2781 independent reflections intensity decay: 0.9%
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.065H-atom parameters constrained
wR(F2) = 0.192w = 1/[σ2(Fo2) + (0.1415P)2 + 4.1121P] where P = (Fo2 + 2Fc2)/3
S = 1.11(Δ/σ)max < 0.001
2781 reflectionsΔρmax = 0.74 e Å3
244 parametersΔρmin = −0.47 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008)
Primary atom site location: structure-invariant direct methodsExtinction coefficient: none
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S20.34651 (3)0.02160 (7)0.27473 (5)0.0381 (3)
S10.25516 (3)−0.05076 (8)0.22805 (5)0.0389 (3)
O20.13221 (10)−0.1328 (3)0.17027 (17)0.0487 (6)
O40.55073 (13)0.0281 (3)0.4215 (2)0.0761 (9)
O30.07037 (11)−0.1051 (3)0.03538 (17)0.0589 (7)
H30.0408−0.11590.05850.088*
O50.46308 (12)0.1178 (2)0.3372 (2)0.0690 (9)
H550.48290.18320.35510.103*
C130.39868 (14)−0.1151 (3)0.2968 (2)0.0359 (7)
C170.41418 (17)−0.3405 (3)0.2889 (2)0.0472 (8)
H170.3975−0.41970.26930.057*
C90.29901 (14)−0.0579 (3)0.0790 (2)0.0374 (7)
H90.3401−0.04040.11500.045*
C70.18433 (13)−0.0960 (2)0.0587 (2)0.0337 (7)
C140.46425 (14)−0.1032 (3)0.3434 (2)0.0379 (7)
C110.23059 (17)−0.0955 (3)−0.0634 (2)0.0443 (8)
H110.2254−0.1039−0.12270.053*
C80.24617 (13)−0.0705 (3)0.1146 (2)0.0335 (7)
C100.29099 (16)−0.0710 (3)−0.0088 (2)0.0428 (8)
H100.3268−0.0632−0.03140.051*
C180.37493 (15)−0.2348 (3)0.2689 (2)0.0421 (7)
H180.3320−0.24380.23630.051*
C190.49747 (14)0.0205 (3)0.3733 (2)0.0441 (8)
C60.12735 (14)−0.1140 (3)0.0947 (2)0.0395 (8)
C150.50222 (15)−0.2117 (3)0.3643 (2)0.0455 (8)
H150.5452−0.20410.39690.055*
C160.47782 (16)−0.3297 (3)0.3378 (2)0.0480 (8)
H160.5038−0.40120.35270.058*
C120.17762 (15)−0.1077 (3)−0.0295 (2)0.0422 (8)
H120.1368−0.1239−0.06650.051*
N10.08340 (11)0.1895 (2)0.91617 (17)0.0361 (6)
O10.01985 (9)0.1677 (2)0.88364 (16)0.0460 (6)
C40.18672 (14)0.2206 (3)0.8937 (2)0.0399 (7)
H40.21270.22560.85550.048*
C10.10782 (14)0.2062 (3)1.0006 (2)0.0449 (8)
H10.08040.20231.03710.054*
C30.21476 (12)0.2373 (2)0.98169 (19)0.0311 (6)
C20.17312 (14)0.2295 (3)1.0351 (2)0.0436 (8)
H20.18950.24001.09460.052*
C50.12157 (14)0.1970 (3)0.8619 (2)0.0428 (7)
H50.10380.18630.80270.051*
U11U22U33U12U13U23
S20.0244 (4)0.0417 (5)0.0448 (6)−0.0003 (3)0.0033 (3)−0.0071 (3)
S10.0220 (4)0.0573 (5)0.0375 (6)−0.0022 (3)0.0081 (3)−0.0064 (3)
O20.0295 (11)0.0734 (15)0.0435 (17)−0.0045 (10)0.0101 (10)0.0060 (11)
O40.0343 (15)0.0647 (17)0.109 (3)−0.0041 (11)−0.0167 (15)−0.0058 (16)
O30.0253 (12)0.092 (2)0.0547 (16)−0.0101 (11)0.0029 (10)0.0050 (13)
O50.0371 (13)0.0452 (13)0.105 (2)−0.0065 (10)−0.0149 (13)−0.0014 (13)
C130.0301 (14)0.0420 (15)0.0366 (18)0.0015 (11)0.0104 (12)0.0001 (12)
C170.056 (2)0.0402 (16)0.050 (2)−0.0028 (14)0.0208 (16)−0.0012 (13)
C90.0296 (15)0.0405 (15)0.044 (2)−0.0018 (11)0.0129 (13)−0.0009 (12)
C70.0281 (14)0.0313 (13)0.040 (2)−0.0027 (10)0.0060 (12)0.0008 (11)
C140.0269 (14)0.0446 (16)0.044 (2)0.0017 (11)0.0127 (12)0.0010 (13)
C110.054 (2)0.0433 (16)0.038 (2)−0.0037 (14)0.0158 (15)−0.0013 (13)
C80.0247 (13)0.0328 (13)0.044 (2)0.0005 (10)0.0103 (12)−0.0008 (11)
C100.0435 (17)0.0418 (16)0.050 (2)−0.0021 (13)0.0243 (15)0.0017 (13)
C180.0367 (15)0.0448 (16)0.045 (2)−0.0064 (12)0.0107 (13)−0.0047 (13)
C190.0232 (16)0.0506 (18)0.057 (2)−0.0011 (12)0.0079 (14)−0.0019 (14)
C60.0256 (14)0.0360 (15)0.054 (2)−0.0054 (11)0.0055 (13)−0.0040 (13)
C150.0336 (15)0.0553 (19)0.050 (2)0.0077 (13)0.0142 (13)0.0056 (15)
C160.0466 (18)0.0494 (18)0.053 (2)0.0115 (14)0.0214 (15)0.0080 (14)
C120.0401 (17)0.0398 (16)0.043 (2)−0.0081 (12)0.0049 (14)−0.0055 (12)
N10.0223 (11)0.0340 (12)0.0523 (19)0.0035 (9)0.0108 (11)0.0060 (10)
O10.0191 (10)0.0503 (13)0.0661 (16)0.0003 (8)0.0071 (9)0.0062 (10)
C40.0290 (15)0.0531 (17)0.042 (2)0.0012 (12)0.0171 (13)0.0015 (13)
C10.0281 (14)0.065 (2)0.047 (2)−0.0006 (13)0.0187 (14)0.0026 (15)
C30.0253 (14)0.0300 (12)0.0416 (19)0.0032 (10)0.0152 (12)0.0025 (11)
C20.0277 (14)0.065 (2)0.042 (2)−0.0003 (13)0.0157 (13)−0.0003 (14)
C50.0316 (15)0.0500 (17)0.047 (2)0.0025 (13)0.0108 (14)0.0025 (14)
S2—C131.799 (3)C11—C101.375 (5)
S2—S12.0397 (10)C11—C121.383 (5)
S1—C81.786 (3)C11—H110.9300
O2—C61.203 (4)C10—H100.9300
O4—C191.194 (4)C18—H180.9300
O3—C61.331 (4)C15—C161.373 (5)
O3—H30.8200C15—H150.9300
O5—C191.305 (4)C16—H160.9300
O5—H550.8200C12—H120.9300
C13—C181.391 (4)N1—C11.324 (4)
C13—C141.404 (4)N1—O11.336 (3)
C17—C161.379 (5)N1—C51.340 (4)
C17—C181.380 (5)C4—C51.369 (4)
C17—H170.9300C4—C31.387 (5)
C9—C101.376 (5)C4—H40.9300
C9—C81.397 (4)C1—C21.376 (4)
C9—H90.9300C1—H10.9300
C7—C121.386 (5)C3—C21.389 (4)
C7—C81.408 (4)C3—C3i1.484 (5)
C7—C61.488 (4)C2—H20.9300
C14—C151.391 (4)C5—H50.9300
C14—C191.502 (4)
C13—S2—S1104.55 (10)O4—C19—C14123.5 (3)
C8—S1—S2104.49 (9)O5—C19—C14112.5 (3)
C6—O3—H3109.5O2—C6—O3123.2 (3)
C19—O5—H55109.5O2—C6—C7123.3 (3)
C18—C13—C14118.6 (3)O3—C6—C7113.5 (3)
C18—C13—S2120.9 (2)C16—C15—C14121.7 (3)
C14—C13—S2120.6 (2)C16—C15—H15119.2
C16—C17—C18120.6 (3)C14—C15—H15119.2
C16—C17—H17119.7C15—C16—C17119.0 (3)
C18—C17—H17119.7C15—C16—H16120.5
C10—C9—C8120.8 (3)C17—C16—H16120.5
C10—C9—H9119.6C11—C12—C7121.2 (3)
C8—C9—H9119.6C11—C12—H12119.4
C12—C7—C8119.3 (3)C7—C12—H12119.4
C12—C7—C6120.6 (3)C1—N1—O1120.2 (2)
C8—C7—C6120.1 (3)C1—N1—C5120.7 (3)
C15—C14—C13119.2 (3)O1—N1—C5119.0 (3)
C15—C14—C19116.4 (3)C5—C4—C3121.4 (3)
C13—C14—C19124.4 (3)C5—C4—H4119.3
C10—C11—C12119.5 (3)C3—C4—H4119.3
C10—C11—H11120.3N1—C1—C2121.0 (3)
C12—C11—H11120.3N1—C1—H1119.5
C9—C8—C7118.6 (3)C2—C1—H1119.5
C9—C8—S1121.5 (2)C4—C3—C2116.3 (3)
C7—C8—S1119.8 (2)C4—C3—C3i122.8 (3)
C11—C10—C9120.6 (3)C2—C3—C3i120.9 (3)
C11—C10—H10119.7C1—C2—C3120.5 (3)
C9—C10—H10119.7C1—C2—H2119.8
C17—C18—C13120.9 (3)C3—C2—H2119.8
C17—C18—H18119.5N1—C5—C4120.0 (3)
C13—C18—H18119.5N1—C5—H5120.0
O4—C19—O5123.9 (3)C4—C5—H5120.0
C13—S2—S1—C8−86.15 (14)C13—C14—C19—O5−12.7 (5)
S1—S2—C13—C1810.1 (3)C12—C7—C6—O2163.0 (3)
S1—S2—C13—C14−169.3 (2)C8—C7—C6—O2−15.1 (4)
C18—C13—C14—C15−3.6 (5)C12—C7—C6—O3−18.1 (4)
S2—C13—C14—C15175.9 (2)C8—C7—C6—O3163.8 (3)
C18—C13—C14—C19176.5 (3)C13—C14—C15—C162.3 (5)
S2—C13—C14—C19−4.1 (4)C19—C14—C15—C16−177.7 (3)
C10—C9—C8—C7−0.5 (4)C14—C15—C16—C170.4 (5)
C10—C9—C8—S1−178.8 (2)C18—C17—C16—C15−1.9 (5)
C12—C7—C8—C9−0.1 (4)C10—C11—C12—C7−0.2 (5)
C6—C7—C8—C9178.1 (3)C8—C7—C12—C110.4 (4)
C12—C7—C8—S1178.2 (2)C6—C7—C12—C11−177.7 (3)
C6—C7—C8—S1−3.6 (4)O1—N1—C1—C2−179.6 (3)
S2—S1—C8—C910.4 (2)C5—N1—C1—C2−1.3 (5)
S2—S1—C8—C7−167.9 (2)C5—C4—C3—C2−0.4 (4)
C12—C11—C10—C9−0.3 (5)C5—C4—C3—C3i179.8 (3)
C8—C9—C10—C110.7 (5)N1—C1—C2—C30.8 (5)
C16—C17—C18—C130.5 (5)C4—C3—C2—C10.1 (5)
C14—C13—C18—C172.2 (5)C3i—C3—C2—C1179.8 (3)
S2—C13—C18—C17−177.2 (3)C1—N1—C5—C40.9 (5)
C15—C14—C19—O4−9.3 (5)O1—N1—C5—C4179.3 (3)
C13—C14—C19—O4170.6 (4)C3—C4—C5—N1−0.1 (5)
C15—C14—C19—O5167.4 (3)
D—H···AD—HH···AD···AD—H···A
O5—H55···O1ii0.821.772.583 (3)174
O3—H3···O1iii0.821.862.672 (3)170
O5—H55···N1ii0.822.503.255 (3)154
C17—H17···O2iv0.932.593.359 (4)140
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O5—H55⋯O1i0.821.772.583 (3)174
O3—H3⋯O1ii0.821.862.672 (3)170
O5—H55⋯N1i0.822.503.255 (3)154
C17—H17⋯O2iii0.932.593.359 (4)140

Symmetry codes: (i) ; (ii) ; (iii) .

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