Literature DB >> 21579513

The betainic form of (imidazol-2-yl)phenylphosphinic acid hydrate.

Peter C Kunz1, Walter Frank.   

Abstract

Single crystals of the title compound, (imidazolium-2-yl)phenyl-phosphinate monohydrate, C(9)H(9)N(2)O(2)·H(2)O, were ob-tained from methanol/water after deprotection and oxidation of bis-(1-diethoxy-methyl-imidazol-2-yl)phenyl-phosphane. In the structure, several N-H⋯O and P-O⋯H-O hydrogen bonds are found. π-π inter-actions between the protonated imidazolyl rings [centroid-centroid distance = 3.977 (2) Å] help to establish the crystal packing. The hydrate water mol-ecule builds hydrogen bridges to three mol-ecules of the phosphinic acid by the O and both H atoms.

Entities:  

Year:  2010        PMID: 21579513      PMCID: PMC2979513          DOI: 10.1107/S1600536810018337

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For structures of related imidazolyl phosphinic acids, see: Ball et al. (1984 ▶); Britten et al. (1993 ▶). For the chemistry of imidazolyl phosphanes, see: Enders et al. (2004 ▶); Kimblin et al. (1996a ▶,b ▶, 2000a ▶,b ▶); Kunz et al. (2003 ▶).

Experimental

Crystal data

C9H9N2O2P·H2O M = 226.17 Monoclinic, a = 8.5890 (6) Å b = 12.1091 (7) Å c = 10.9534 (7) Å β = 111.766 (7)° V = 1057.99 (12) Å3 Z = 4 Mo Kα radiation μ = 0.25 mm−1 T = 223 K 0.2 × 0.2 × 0.2 mm

Data collection

Stoe IPDS diffractometer 14882 measured reflections 2069 independent reflections 1606 reflections with I > 2σ(I) R int = 0.052

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.092 S = 0.93 2069 reflections 148 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.40 e Å−3 Δρmin = −0.16 e Å−3 Data collection: EXPOSE in IPDS Software (Stoe & Cie, 2000 ▶); cell refinement: CELL in IPDS Software; data reduction: INTEGRATE in IPDS Software; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810018337/nc2181sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810018337/nc2181Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C9H9N2O2P·H2OF(000) = 472
Mr = 226.17Dx = 1.420 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
a = 8.5890 (6) ÅCell parameters from 8000 reflections
b = 12.1091 (7) Åθ = 2.6–26.1°
c = 10.9534 (7) ŵ = 0.25 mm1
β = 111.766 (7)°T = 223 K
V = 1057.99 (12) Å3Isometric, colourless
Z = 40.2 × 0.2 × 0.2 mm
Stoe IPDS diffractometer1606 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.052
graphiteθmax = 26.1°, θmin = 2.6°
Detector resolution: 6.67 pixels mm-1h = −10→10
φ–scansk = −14→14
14882 measured reflectionsl = −13→13
2069 independent reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037Hydrogen site location: difference Fourier map
wR(F2) = 0.092H atoms treated by a mixture of independent and constrained refinement
S = 0.93w = 1/[σ2(Fo2) + (0.0664P)2] where P = (Fo2 + 2Fc2)/3
2069 reflections(Δ/σ)max < 0.001
148 parametersΔρmax = 0.40 e Å3
0 restraintsΔρmin = −0.16 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
P10.21068 (5)0.75986 (4)0.66209 (4)0.02580 (15)
O10.38922 (15)0.77558 (11)0.74699 (13)0.0357 (3)
O20.11462 (16)0.84520 (10)0.56559 (13)0.0348 (3)
O3−0.03925 (18)1.01453 (13)0.64926 (14)0.0353 (3)
H30.007 (3)0.965 (2)0.622 (3)0.054 (7)*
H4−0.068 (3)1.063 (3)0.596 (3)0.061 (8)*
N10.11416 (18)0.61686 (12)0.44158 (15)0.0296 (3)
H10.03430.65960.39210.044*
N20.3181 (2)0.55296 (12)0.60673 (16)0.0329 (4)
H20.399 (3)0.5492 (17)0.689 (2)0.037 (6)*
C10.2123 (2)0.63787 (14)0.56488 (18)0.0269 (4)
C20.1578 (3)0.51769 (16)0.4043 (2)0.0383 (5)
H100.10800.48390.32160.057*
C30.2853 (3)0.47751 (16)0.5081 (2)0.0403 (5)
H110.34120.41010.51190.060*
C40.0927 (2)0.71894 (14)0.76010 (18)0.0276 (4)
C5−0.0757 (2)0.74606 (15)0.7218 (2)0.0346 (4)
H5−0.12920.78560.64350.052*
C6−0.1654 (2)0.71519 (18)0.7985 (2)0.0430 (5)
H6−0.27930.73410.77260.064*
C7−0.0874 (3)0.65688 (18)0.9125 (2)0.0436 (5)
H7−0.14820.63610.96460.065*
C80.0794 (3)0.62866 (18)0.9510 (2)0.0428 (5)
H80.13160.58831.02890.064*
C90.1702 (2)0.65964 (17)0.87531 (19)0.0356 (4)
H90.28410.64060.90180.053*
U11U22U33U12U13U23
P10.0274 (2)0.0255 (2)0.0236 (3)−0.00120 (16)0.00835 (18)−0.00096 (18)
O10.0315 (7)0.0423 (7)0.0312 (8)−0.0076 (5)0.0094 (6)−0.0054 (6)
O20.0456 (7)0.0294 (6)0.0305 (8)0.0057 (5)0.0154 (6)0.0035 (5)
O30.0428 (8)0.0301 (7)0.0295 (8)0.0019 (6)0.0092 (6)−0.0007 (6)
N10.0308 (8)0.0275 (7)0.0265 (8)0.0012 (6)0.0060 (6)0.0000 (6)
N20.0359 (8)0.0303 (8)0.0280 (9)0.0054 (6)0.0067 (7)0.0014 (7)
C10.0259 (8)0.0270 (9)0.0263 (10)0.0004 (6)0.0080 (7)0.0029 (7)
C20.0490 (11)0.0325 (9)0.0296 (10)−0.0005 (8)0.0104 (9)−0.0088 (8)
C30.0495 (11)0.0293 (10)0.0380 (12)0.0088 (8)0.0116 (9)−0.0036 (8)
C40.0310 (9)0.0259 (8)0.0260 (10)−0.0017 (6)0.0108 (7)−0.0034 (7)
C50.0321 (9)0.0321 (9)0.0387 (11)0.0035 (7)0.0122 (8)0.0000 (8)
C60.0351 (10)0.0423 (11)0.0571 (14)−0.0004 (8)0.0236 (10)−0.0070 (10)
C70.0476 (11)0.0486 (12)0.0450 (13)−0.0119 (9)0.0291 (10)−0.0092 (10)
C80.0453 (11)0.0516 (12)0.0316 (11)−0.0100 (9)0.0145 (9)0.0042 (9)
C90.0317 (9)0.0416 (10)0.0316 (11)−0.0012 (7)0.0095 (8)0.0045 (8)
P1—O11.4815 (13)C2—H100.9400
P1—O21.4897 (13)C3—H110.9400
P1—C41.7974 (18)C4—C51.388 (3)
P1—C11.8240 (18)C4—C91.389 (3)
O3—H30.83 (3)C5—C61.385 (3)
O3—H40.79 (3)C5—H50.9400
N1—C11.325 (2)C6—C71.373 (3)
N1—C21.365 (2)C6—H60.9400
N1—H10.8700C7—C81.377 (3)
N2—C11.335 (2)C7—H70.9400
N2—C31.362 (2)C8—C91.385 (3)
N2—H20.91 (2)C8—H80.9400
C2—C31.344 (3)C9—H90.9400
O1—P1—O2121.89 (8)C2—C3—H11126.5
O1—P1—C4110.00 (8)N2—C3—H11126.5
O2—P1—C4109.18 (8)C5—C4—C9119.45 (17)
O1—P1—C1103.90 (8)C5—C4—P1120.62 (14)
O2—P1—C1105.65 (8)C9—C4—P1119.93 (13)
C4—P1—C1104.68 (8)C6—C5—C4120.30 (19)
H3—O3—H4109 (3)C6—C5—H5119.8
C1—N1—C2109.43 (15)C4—C5—H5119.8
C1—N1—H1125.3C7—C6—C5119.77 (18)
C2—N1—H1125.3C7—C6—H6120.1
C1—N2—C3109.27 (16)C5—C6—H6120.1
C1—N2—H2123.3 (14)C6—C7—C8120.50 (19)
C3—N2—H2127.4 (14)C6—C7—H7119.7
N1—C1—N2107.26 (16)C8—C7—H7119.7
N1—C1—P1127.65 (13)C7—C8—C9120.1 (2)
N2—C1—P1125.07 (14)C7—C8—H8119.9
C3—C2—N1107.04 (17)C9—C8—H8119.9
C3—C2—H10126.5C8—C9—C4119.84 (18)
N1—C2—H10126.5C8—C9—H9120.1
C2—C3—N2106.99 (17)C4—C9—H9120.1
C2—N1—C1—N2−0.1 (2)O2—P1—C4—C514.52 (17)
C2—N1—C1—P1178.80 (14)C1—P1—C4—C5−98.21 (15)
C3—N2—C1—N1−0.1 (2)O1—P1—C4—C9−29.28 (17)
C3—N2—C1—P1−179.06 (14)O2—P1—C4—C9−165.48 (14)
O1—P1—C1—N1−145.99 (16)C1—P1—C4—C981.80 (16)
O2—P1—C1—N1−16.61 (18)C9—C4—C5—C60.6 (3)
C4—P1—C1—N198.60 (17)P1—C4—C5—C6−179.36 (15)
O1—P1—C1—N232.72 (18)C4—C5—C6—C7−0.4 (3)
O2—P1—C1—N2162.09 (15)C5—C6—C7—C8−0.1 (3)
C4—P1—C1—N2−82.69 (17)C6—C7—C8—C90.4 (3)
C1—N1—C2—C30.3 (2)C7—C8—C9—C4−0.2 (3)
N1—C2—C3—N2−0.3 (2)C5—C4—C9—C8−0.3 (3)
C1—N2—C3—C20.3 (2)P1—C4—C9—C8179.68 (16)
O1—P1—C4—C5150.71 (14)
D—H···AD—HH···AD···AD—H···A
N1—H1···O1i0.871.802.6302 (19)160
N2—H2···O3ii0.91 (2)1.78 (2)2.684 (2)168 (2)
O3—H3···O20.83 (3)1.94 (3)2.773 (2)177 (3)
O3—H4···O2iii0.79 (3)2.00 (3)2.777 (2)164 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯O1i0.871.802.6302 (19)160
N2—H2⋯O3ii0.91 (2)1.78 (2)2.684 (2)168 (2)
O3—H3⋯O20.83 (3)1.94 (3)2.773 (2)177 (3)
O3—H4⋯O2iii0.79 (3)2.00 (3)2.777 (2)164 (3)

Symmetry codes: (i) ; (ii) ; (iii) .

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