Literature DB >> 21579451

Ethyl (4aR*,7S*,8S*,8aS*)-1-oxo-7-phenyl-3,4,4a,7,8,8a-hexa-hydro-1H-isochromene-8-carboxyl-ate.

Xiu Qing Jiang1, Jin-Long Wu.   

Abstract

In the title compound, C(18)H(20)O(4), both the tetra-hydro-pyran-one ring and the cyclo-hexene ring adopt envelope conformations. The crystal packing is stabilized by weak inter-molecular C-H⋯O hydrogen bonding.

Entities:  

Year:  2010        PMID: 21579451      PMCID: PMC2979652          DOI: 10.1107/S1600536810017009

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

The title compound is a derivative of 1-oxo-hexa­hydro-1H-isochromene, which has been reported as a key inter­mediate towards the total syntheses of natural products such as eleutherobin and tetronothio­din, see: Kim et al. (2000 ▶); Jung et al. (2000 ▶); Page et al. (2003 ▶). For microwave-assisted intra­molecular Diels–Alder cyclo­addition, see: Wu et al. (2006 ▶, 2007 ▶); Wang et al. (2009 ▶).

Experimental

Crystal data

C18H20O4 M = 300.34 Orthorhombic, a = 15.5513 (12) Å b = 9.9178 (7) Å c = 21.1542 (17) Å V = 3262.7 (4) Å3 Z = 8 Mo Kα radiation μ = 0.09 mm−1 T = 296 K 0.36 × 0.16 × 0.14 mm

Data collection

Rigaku R-AXIS RAPID IP diffractometer 26140 measured reflections 3200 independent reflections 1627 reflections with I > 2σ(I) R int = 0.075

Refinement

R[F 2 > 2σ(F 2)] = 0.069 wR(F 2) = 0.197 S = 1.00 3200 reflections 202 parameters 1 restraint H-atom parameters constrained Δρmax = 0.35 e Å−3 Δρmin = −0.28 e Å−3 Data collection: PROCESS-AUTO (Rigaku, 1998 ▶); cell refinement: PROCESS-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2002 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810017009/xu2757sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810017009/xu2757Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H20O4F(000) = 1280
Mr = 300.34Dx = 1.223 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 12675 reflections
a = 15.5513 (12) Åθ = 3.1–27.4°
b = 9.9178 (7) ŵ = 0.09 mm1
c = 21.1542 (17) ÅT = 296 K
V = 3262.7 (4) Å3Needle, colorless
Z = 80.36 × 0.16 × 0.14 mm
Rigaku R-AXIS RAPID IP diffractometer1627 reflections with I > 2σ(I)
Radiation source: rolling anodeRint = 0.075
graphiteθmax = 26.0°, θmin = 3.1°
Detector resolution: 10.00 pixels mm-1h = −19→19
ω scansk = −11→12
26140 measured reflectionsl = −26→26
3200 independent reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.069H-atom parameters constrained
wR(F2) = 0.197w = 1/[σ2(Fo2) + (0.0698P)2 + 1.9409P] where P = (Fo2 + 2Fc2)/3
S = 1.00(Δ/σ)max < 0.001
3200 reflectionsΔρmax = 0.35 e Å3
202 parametersΔρmin = −0.28 e Å3
1 restraintExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0067 (12)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O30.16345 (14)0.3940 (2)0.39009 (15)0.1040 (10)
C170.0706 (3)0.3651 (6)0.3998 (3)0.146 (2)
H17A0.05240.28600.37640.175*
H17B0.03500.44140.38800.175*
C180.0687 (4)0.3407 (8)0.4701 (3)0.205 (3)
H18A0.09930.25910.47960.308*
H18B0.01020.33250.48390.308*
H18C0.09550.41500.49150.308*
O40.18555 (14)0.1796 (2)0.36346 (12)0.0848 (8)
C10.30154 (17)0.3380 (3)0.35293 (14)0.0588 (8)
H10.30830.43300.36450.071*
C90.36348 (18)0.2519 (3)0.39280 (14)0.0642 (8)
H90.34840.15710.38600.077*
C160.21088 (19)0.2931 (3)0.36799 (15)0.0660 (8)
C100.35139 (19)0.2824 (3)0.46291 (15)0.0680 (8)
C80.4540 (2)0.2708 (3)0.37126 (18)0.0765 (9)
H80.49780.24860.39930.092*
O20.27531 (18)0.5007 (3)0.20646 (13)0.1045 (9)
C20.32050 (19)0.3207 (3)0.28126 (15)0.0704 (9)
H20.31270.22490.27140.084*
C50.4213 (2)0.5048 (4)0.24889 (18)0.0856 (10)
H5A0.40500.55860.28530.103*
H5B0.48030.52640.23810.103*
C70.4757 (2)0.3170 (4)0.31524 (19)0.0837 (11)
H70.53400.32580.30650.100*
C60.4140 (2)0.3561 (3)0.26494 (16)0.0730 (9)
H60.42930.30530.22680.088*
C150.3062 (2)0.1947 (4)0.50117 (18)0.0838 (10)
H150.28350.11590.48420.101*
C30.2542 (3)0.3978 (4)0.24313 (18)0.0886 (11)
O10.17953 (19)0.3714 (4)0.24613 (17)0.1447 (14)
C110.3852 (2)0.3990 (4)0.48850 (19)0.0886 (11)
H110.41500.45920.46290.106*
C140.2948 (3)0.2231 (6)0.5638 (2)0.1138 (14)
H140.26360.16410.58910.137*
C130.3294 (4)0.3388 (7)0.5899 (2)0.1200 (16)
H130.32220.35720.63260.144*
C40.3635 (3)0.5372 (5)0.1941 (2)0.1098 (14)
H4A0.36660.63300.18530.132*
H4B0.38350.48930.15700.132*
C120.3746 (3)0.4264 (5)0.5521 (2)0.1144 (15)
H120.39820.50430.56930.137*
U11U22U33U12U13U23
O30.0557 (13)0.0768 (15)0.179 (3)−0.0037 (11)0.0323 (15)−0.0228 (16)
C170.095 (3)0.127 (4)0.216 (7)−0.015 (3)0.045 (4)−0.020 (4)
C180.146 (6)0.258 (8)0.211 (8)−0.069 (5)0.052 (5)0.007 (7)
O40.0728 (15)0.0589 (13)0.123 (2)−0.0162 (11)−0.0052 (13)−0.0008 (12)
C10.0494 (15)0.0527 (15)0.074 (2)−0.0019 (13)0.0044 (14)−0.0056 (14)
C90.0597 (17)0.0526 (15)0.080 (2)0.0045 (14)0.0024 (16)−0.0035 (15)
C160.0563 (17)0.0572 (17)0.084 (2)−0.0022 (14)−0.0007 (16)0.0004 (16)
C100.0599 (18)0.0660 (19)0.078 (2)0.0079 (15)−0.0042 (16)−0.0010 (17)
C80.0546 (18)0.079 (2)0.096 (3)0.0106 (16)0.0022 (18)−0.0019 (19)
O20.095 (2)0.116 (2)0.103 (2)−0.0024 (16)−0.0076 (15)0.0319 (17)
C20.068 (2)0.0661 (18)0.077 (2)−0.0033 (16)0.0021 (16)−0.0063 (16)
C50.077 (2)0.083 (2)0.096 (3)−0.0076 (19)0.018 (2)−0.002 (2)
C70.0534 (19)0.091 (2)0.106 (3)0.0064 (17)0.0163 (19)−0.010 (2)
C60.068 (2)0.074 (2)0.077 (2)0.0017 (16)0.0155 (17)−0.0103 (17)
C150.081 (2)0.092 (2)0.078 (2)0.003 (2)0.0015 (19)0.011 (2)
C30.078 (2)0.106 (3)0.083 (2)−0.007 (2)−0.010 (2)0.010 (2)
O10.0751 (19)0.195 (3)0.164 (3)−0.024 (2)−0.0326 (19)0.072 (3)
C110.096 (3)0.078 (2)0.092 (3)−0.001 (2)−0.003 (2)−0.015 (2)
C140.111 (3)0.133 (4)0.098 (4)0.009 (3)0.005 (3)0.022 (3)
C130.127 (4)0.155 (5)0.078 (3)0.037 (4)0.003 (3)−0.012 (3)
C40.099 (3)0.111 (3)0.119 (3)−0.008 (3)0.014 (3)0.028 (3)
C120.128 (4)0.109 (3)0.106 (4)0.014 (3)−0.015 (3)−0.031 (3)
O3—C161.327 (4)C2—C31.516 (5)
O3—C171.486 (5)C2—C61.535 (4)
C17—C181.507 (8)C2—H20.9800
C17—H17A0.9700C5—C41.501 (5)
C17—H17B0.9700C5—C61.518 (5)
C18—H18A0.9600C5—H5A0.9700
C18—H18B0.9600C5—H5B0.9700
C18—H18C0.9600C7—C61.485 (5)
O4—C161.197 (3)C7—H70.9300
C1—C161.512 (4)C6—H60.9800
C1—C91.539 (4)C15—C141.367 (6)
C1—C21.554 (4)C15—H150.9300
C1—H10.9800C3—O11.192 (4)
C9—C81.491 (4)C11—C121.382 (6)
C9—C101.525 (4)C11—H110.9300
C9—H90.9800C14—C131.382 (7)
C10—C151.379 (5)C14—H140.9300
C10—C111.381 (4)C13—C121.374 (6)
C8—C71.314 (4)C13—H130.9300
C8—H80.9300C4—H4A0.9700
O2—C31.323 (4)C4—H4B0.9700
O2—C41.442 (5)C12—H120.9300
C16—O3—C17116.3 (3)C1—C2—H2106.9
O3—C17—C18100.7 (4)C4—C5—C6109.6 (3)
O3—C17—H17A111.6C4—C5—H5A109.7
C18—C17—H17A111.6C6—C5—H5A109.7
O3—C17—H17B111.6C4—C5—H5B109.7
C18—C17—H17B111.6C6—C5—H5B109.7
H17A—C17—H17B109.4H5A—C5—H5B108.2
C17—C18—H18A109.5C8—C7—C6124.8 (3)
C17—C18—H18B109.5C8—C7—H7117.6
H18A—C18—H18B109.5C6—C7—H7117.6
C17—C18—H18C109.5C7—C6—C5111.5 (3)
H18A—C18—H18C109.5C7—C6—C2113.0 (3)
H18B—C18—H18C109.5C5—C6—C2110.1 (3)
C16—C1—C9107.8 (2)C7—C6—H6107.3
C16—C1—C2110.5 (2)C5—C6—H6107.3
C9—C1—C2110.8 (2)C2—C6—H6107.3
C16—C1—H1109.3C14—C15—C10120.4 (4)
C9—C1—H1109.3C14—C15—H15119.8
C2—C1—H1109.3C10—C15—H15119.8
C8—C9—C10112.9 (3)O1—C3—O2116.3 (4)
C8—C9—C1110.7 (3)O1—C3—C2121.5 (4)
C10—C9—C1110.2 (2)O2—C3—C2122.2 (3)
C8—C9—H9107.6C10—C11—C12120.0 (4)
C10—C9—H9107.6C10—C11—H11120.0
C1—C9—H9107.6C12—C11—H11120.0
O4—C16—O3123.6 (3)C15—C14—C13120.5 (5)
O4—C16—C1124.5 (3)C15—C14—H14119.8
O3—C16—C1111.8 (2)C13—C14—H14119.8
C15—C10—C11119.4 (3)C12—C13—C14119.5 (4)
C15—C10—C9120.6 (3)C12—C13—H13120.3
C11—C10—C9120.0 (3)C14—C13—H13120.3
C7—C8—C9124.2 (3)O2—C4—C5112.1 (3)
C7—C8—H8117.9O2—C4—H4A109.2
C9—C8—H8117.9C5—C4—H4A109.2
C3—O2—C4122.4 (3)O2—C4—H4B109.2
C3—C2—C6114.1 (3)C5—C4—H4B109.2
C3—C2—C1109.5 (3)H4A—C4—H4B107.9
C6—C2—C1112.0 (2)C13—C12—C11120.2 (4)
C3—C2—H2106.9C13—C12—H12119.9
C6—C2—H2106.9C11—C12—H12119.9
C16—O3—C17—C18100.1 (5)C8—C7—C6—C2−7.3 (5)
C16—C1—C9—C8168.7 (2)C4—C5—C6—C7175.1 (3)
C2—C1—C9—C847.7 (3)C4—C5—C6—C2−58.7 (4)
C16—C1—C9—C10−65.7 (3)C3—C2—C6—C7160.7 (3)
C2—C1—C9—C10173.3 (2)C1—C2—C6—C735.6 (4)
C17—O3—C16—O4−9.7 (6)C3—C2—C6—C535.4 (4)
C17—O3—C16—C1173.5 (3)C1—C2—C6—C5−89.8 (3)
C9—C1—C16—O4−55.5 (4)C11—C10—C15—C140.1 (5)
C2—C1—C16—O465.7 (4)C9—C10—C15—C14−179.3 (3)
C9—C1—C16—O3121.3 (3)C4—O2—C3—O1−174.7 (4)
C2—C1—C16—O3−117.5 (3)C4—O2—C3—C27.5 (6)
C8—C9—C10—C15−133.0 (3)C6—C2—C3—O1172.4 (4)
C1—C9—C10—C15102.6 (3)C1—C2—C3—O1−61.2 (5)
C8—C9—C10—C1147.5 (4)C6—C2—C3—O2−9.9 (5)
C1—C9—C10—C11−76.9 (4)C1—C2—C3—O2116.5 (4)
C10—C9—C8—C7−144.6 (3)C15—C10—C11—C120.9 (5)
C1—C9—C8—C7−20.5 (4)C9—C10—C11—C12−179.7 (3)
C16—C1—C2—C356.2 (3)C10—C15—C14—C13−1.0 (6)
C9—C1—C2—C3175.6 (3)C15—C14—C13—C120.8 (7)
C16—C1—C2—C6−176.1 (2)C3—O2—C4—C5−31.0 (5)
C9—C1—C2—C6−56.7 (3)C6—C5—C4—O256.5 (4)
C9—C8—C7—C6−0.5 (6)C14—C13—C12—C110.2 (7)
C8—C7—C6—C5117.3 (4)C10—C11—C12—C13−1.0 (6)
D—H···AD—HH···AD···AD—H···A
C1—H1···O4i0.982.453.401 (4)164
C5—H5A···O4i0.972.483.412 (4)161
C7—H7···O1ii0.932.563.468 (5)165
C13—H13···O2iii0.932.593.356 (6)140
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C1—H1⋯O4i0.982.453.401 (4)164
C5—H5A⋯O4i0.972.483.412 (4)161
C7—H7⋯O1ii0.932.563.468 (5)165
C13—H13⋯O2iii0.932.593.356 (6)140

Symmetry codes: (i) ; (ii) ; (iii) .

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