| Literature DB >> 21579446 |
Abstract
In the title compound, C(4)H(4)N(4)O, both H atoms bonded to one methyl-ene C atom are involved in C-H⋯N hydrogen-bonding inter-actions; one of the inter-actions results in dimers of the title mol-ecule lying about inversion centers in R(2) (2)(12) motifs and the other forms chains of mol-ecules lying along the c axis.Entities:
Year: 2010 PMID: 21579446 PMCID: PMC2979356 DOI: 10.1107/S1600536810017265
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C4H4N4O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 1409 reflections |
| θ = 2.3–27.5° | |
| µ = 0.10 mm−1 | |
| β = 108.55 (3)° | Prism, colorless |
| 0.20 × 0.20 × 0.20 mm | |
| Rigaku Mercury2 diffractometer | 1408 independent reflections |
| Radiation source: fine-focus sealed tube | 1094 reflections with |
| graphite | |
| Detector resolution: 13.6612 pixels mm-1 | θmax = 27.5°, θmin = 3.0° |
| CCD_Profile_fitting scans | |
| Absorption correction: multi-scan ( | |
| 6154 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 1408 reflections | Δρmax = 0.20 e Å−3 |
| 83 parameters | Δρmin = −0.20 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.15 (2) |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.1721 (2) | −0.00421 (14) | 0.24979 (14) | 0.0738 (5) | |
| N1 | 0.1213 (3) | 0.3227 (2) | 0.03826 (14) | 0.0730 (6) | |
| N2 | 0.6354 (3) | 0.36079 (17) | 0.61699 (14) | 0.0593 (5) | |
| N3 | 0.3553 (2) | 0.02971 (15) | 0.31634 (14) | 0.0537 (5) | |
| N4 | 0.38510 (18) | 0.17474 (12) | 0.33544 (10) | 0.0345 (4) | |
| C2 | 0.6201 (2) | 0.29919 (17) | 0.52436 (14) | 0.0411 (4) | |
| C1 | 0.6039 (2) | 0.22069 (18) | 0.40327 (13) | 0.0419 (4) | |
| H1A | 0.6543 | 0.2860 | 0.3487 | 0.050* | |
| H1B | 0.6962 | 0.1336 | 0.4222 | 0.050* | |
| C4 | 0.1609 (2) | 0.30241 (19) | 0.14509 (15) | 0.0439 (4) | |
| C3 | 0.2111 (2) | 0.28025 (16) | 0.28328 (13) | 0.0405 (4) | |
| H3B | 0.2504 | 0.3752 | 0.3264 | 0.049* | |
| H3C | 0.0835 | 0.2446 | 0.3006 | 0.049* |
| O1 | 0.0564 (9) | 0.0523 (9) | 0.0991 (11) | −0.0192 (6) | 0.0056 (7) | −0.0124 (6) |
| N1 | 0.0569 (11) | 0.1157 (16) | 0.0448 (9) | 0.0196 (9) | 0.0140 (7) | 0.0171 (8) |
| N2 | 0.0655 (11) | 0.0593 (10) | 0.0484 (8) | −0.0107 (8) | 0.0113 (7) | −0.0105 (7) |
| N3 | 0.0509 (9) | 0.0336 (8) | 0.0697 (10) | −0.0029 (6) | 0.0094 (7) | −0.0008 (6) |
| N4 | 0.0342 (7) | 0.0298 (7) | 0.0356 (7) | 0.0010 (5) | 0.0056 (5) | 0.0001 (4) |
| C2 | 0.0369 (8) | 0.0392 (8) | 0.0407 (8) | −0.0047 (6) | 0.0032 (6) | 0.0029 (6) |
| C1 | 0.0357 (9) | 0.0485 (9) | 0.0387 (8) | −0.0044 (7) | 0.0076 (6) | −0.0030 (6) |
| C4 | 0.0339 (8) | 0.0545 (9) | 0.0390 (9) | 0.0035 (7) | 0.0058 (6) | 0.0048 (6) |
| C3 | 0.0449 (9) | 0.0372 (8) | 0.0352 (8) | 0.0099 (6) | 0.0067 (6) | −0.0017 (6) |
| O1—N3 | 1.2305 (18) | C2—C1 | 1.481 (2) |
| N1—C4 | 1.135 (2) | C1—H1A | 0.9700 |
| N2—C2 | 1.136 (2) | C1—H1B | 0.9700 |
| N3—N4 | 1.3233 (18) | C4—C3 | 1.464 (2) |
| N4—C1 | 1.4516 (18) | C3—H3B | 0.9700 |
| N4—C3 | 1.4539 (17) | C3—H3C | 0.9700 |
| O1—N3—N4 | 113.89 (13) | C2—C1—H1B | 109.2 |
| N3—N4—C1 | 115.67 (12) | H1A—C1—H1B | 107.9 |
| N3—N4—C3 | 121.36 (12) | N1—C4—C3 | 178.53 (19) |
| C1—N4—C3 | 122.83 (12) | N4—C3—C4 | 112.80 (12) |
| N2—C2—C1 | 178.83 (17) | N4—C3—H3B | 109.0 |
| N4—C1—C2 | 111.97 (13) | C4—C3—H3B | 109.0 |
| N4—C1—H1A | 109.2 | N4—C3—H3C | 109.0 |
| C2—C1—H1A | 109.2 | C4—C3—H3C | 109.0 |
| N4—C1—H1B | 109.2 | H3B—C3—H3C | 107.8 |
| H··· | ||||
| C3—H3B···N2i | 0.97 | 2.50 | 3.450 (2) | 165 |
| C3—H3C···N1ii | 0.97 | 2.62 | 3.183 (2) | 117 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C3—H3 | 0.97 | 2.50 | 3.450 (2) | 165 |
| C3—H3 | 0.97 | 2.62 | 3.183 (2) | 117 |
Symmetry codes: (i) ; (ii) .