Literature DB >> 21579390

2,2-Dichloro-1-[(2R,5S)-5-ethyl-2-methyl-2-propyl-1,3-oxazolidin-3-yl]ethanone.

Ying Fu1, Fei Ye, Xiaotian Wen.   

Abstract

In the title compound, C(11)H(19)Cl(2)NO(2), the oxazolidine ring is in an envelope conformation with the O atom forming the flap. In the crystal structure, mol-ecules are linked by weak inter-molecular C-H⋯O hydrogen bonds, forming chains.

Entities:  

Year:  2010        PMID: 21579390      PMCID: PMC2979515          DOI: 10.1107/S1600536810016090

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to N-dichloro­acetyl oxazolidine, see: Agami & Couty (2004 ▶); Abu-Qare & Duncan (2002 ▶); Guirado et al. (2003 ▶); Davies & Caseley (1999 ▶). For the bioactivity of related compounds, see: Del Buono et al. (2007 ▶); Hatzios & Burgos (2004 ▶). For details of the synthesis, see: Fu et al. (2009 ▶).

Experimental

Crystal data

C11H19Cl2NO2 M = 268.17 Orthorhombic, a = 6.4834 (12) Å b = 10.795 (2) Å c = 20.030 (4) Å V = 1401.8 (5) Å3 Z = 4 Mo Kα radiation μ = 0.45 mm−1 T = 293 K 0.32 × 0.24 × 0.20 mm

Data collection

Bruker SMART CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.869, T max = 0.915 14134 measured reflections 3499 independent reflections 2117 reflections with I > 2σ(I) R int = 0.058

Refinement

R[F 2 > 2σ(F 2)] = 0.084 wR(F 2) = 0.258 S = 1.02 3499 reflections 148 parameters H-atom parameters constrained Δρmax = 0.58 e Å−3 Δρmin = −0.39 e Å−3 Absolute structure: Flack (1983 ▶) 1468 Friedels Flack parameter: 0.02 (15) Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT (Bruker, 1998 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810016090/lh5034sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810016090/lh5034Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H19Cl2NO2F(000) = 568.0
Mr = 268.17Dx = 1.271 Mg m3Dm = 1.271 Mg m3Dm measured by not measured
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 3142 reflections
a = 6.4834 (12) Åθ = 2.8–20.6°
b = 10.795 (2) ŵ = 0.45 mm1
c = 20.030 (4) ÅT = 293 K
V = 1401.8 (5) Å3Block, colourless
Z = 40.32 × 0.24 × 0.20 mm
Bruker SMART CCD diffractometer3499 independent reflections
Radiation source: fine-focus sealed tube2117 reflections with I > 2σ(I)
graphiteRint = 0.058
φ and ω scansθmax = 28.4°, θmin = 2.8°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −8→8
Tmin = 0.869, Tmax = 0.915k = −14→14
14134 measured reflectionsl = −25→26
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.084H-atom parameters constrained
wR(F2) = 0.258w = 1/[σ2(Fo2) + (0.165P)2] where P = (Fo2 + 2Fc2)/3
S = 1.02(Δ/σ)max < 0.001
3499 reflectionsΔρmax = 0.58 e Å3
148 parametersΔρmin = −0.39 e Å3
0 restraintsAbsolute structure: Flack (1983) 1468 Friedels
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.02 (15)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.5074 (7)0.9192 (4)0.2071 (2)0.0675 (11)
H10.49660.83650.22700.081*
C20.5889 (7)1.0103 (3)0.2598 (2)0.0638 (10)
C30.7886 (9)0.8326 (4)0.3065 (3)0.0789 (13)
H3A0.67840.77580.31810.095*
H3B0.84540.80890.26360.095*
C40.9470 (13)0.8334 (4)0.3575 (3)0.105 (2)
H41.06270.85940.32930.126*
C51.0407 (13)0.7301 (5)0.3866 (4)0.122 (3)
H5A1.09220.68010.35000.147*
H5B0.93060.68280.40720.147*
C61.2052 (13)0.7357 (6)0.4353 (3)0.111 (2)
H6A1.33580.73620.41270.166*
H6B1.19760.66470.46400.166*
H6C1.19150.80980.46140.166*
C70.8170 (7)1.0342 (4)0.3589 (2)0.0680 (10)
C80.9703 (10)1.1251 (5)0.3287 (3)0.0925 (16)
H8A1.06351.15330.36270.139*
H8B0.89731.19460.31040.139*
H8C1.04701.08470.29390.139*
C90.6750 (10)1.1009 (5)0.4051 (3)0.0875 (14)
H9A0.75501.13100.44270.105*
H9B0.62051.17270.38190.105*
C100.4982 (11)1.0277 (6)0.4315 (3)0.1013 (18)
H10A0.54810.94940.44880.122*
H10B0.40231.01030.39550.122*
C110.3855 (15)1.0989 (8)0.4874 (4)0.127 (3)
H11A0.47811.11190.52420.190*
H11B0.26881.05160.50230.190*
H11C0.33961.17750.47070.190*
Cl10.6885 (3)0.91462 (14)0.14073 (7)0.0996 (5)
Cl20.2642 (2)0.96549 (13)0.17873 (9)0.1008 (5)
N10.7143 (5)0.9597 (3)0.30507 (18)0.0629 (8)
O10.9265 (6)0.9417 (3)0.39428 (17)0.0793 (9)
O20.5407 (6)1.1193 (3)0.2580 (2)0.0859 (10)
U11U22U33U12U13U23
C10.072 (2)0.0401 (18)0.090 (3)0.0031 (17)−0.013 (2)0.0002 (18)
C20.071 (2)0.0396 (17)0.081 (3)0.0077 (17)0.000 (2)−0.0023 (17)
C30.093 (3)0.0354 (18)0.108 (3)0.014 (2)−0.021 (3)−0.0090 (18)
C40.154 (5)0.046 (2)0.114 (4)0.033 (3)−0.043 (4)−0.013 (3)
C50.149 (6)0.059 (3)0.160 (6)0.031 (4)−0.071 (5)−0.020 (3)
C60.127 (5)0.070 (3)0.134 (5)0.010 (4)−0.031 (4)0.013 (3)
C70.084 (3)0.0379 (17)0.082 (3)0.0039 (18)−0.010 (2)−0.0029 (16)
C80.101 (4)0.052 (2)0.124 (4)−0.020 (3)−0.013 (3)0.003 (3)
C90.109 (4)0.060 (3)0.093 (3)0.006 (3)0.003 (3)−0.010 (2)
C100.105 (4)0.075 (3)0.124 (5)0.010 (3)0.006 (3)0.000 (3)
C110.149 (6)0.124 (6)0.107 (4)0.021 (5)0.035 (4)−0.005 (4)
Cl10.1169 (11)0.0780 (8)0.1038 (9)−0.0063 (8)0.0152 (9)−0.0185 (7)
Cl20.0899 (8)0.0761 (8)0.1365 (12)0.0154 (7)−0.0350 (8)−0.0093 (7)
N10.0715 (19)0.0298 (13)0.087 (2)0.0036 (14)−0.0060 (17)−0.0042 (13)
O10.102 (2)0.0413 (14)0.095 (2)0.0055 (15)−0.0232 (19)−0.0079 (14)
O20.114 (3)0.0338 (13)0.110 (2)0.0152 (16)−0.023 (2)−0.0013 (14)
C1—C21.536 (6)C6—H6C0.9600
C1—Cl21.750 (4)C7—O11.416 (5)
C1—Cl11.775 (5)C7—C91.491 (7)
C1—H10.9800C7—N11.501 (5)
C2—O21.218 (5)C7—C81.523 (7)
C2—N11.335 (6)C8—H8A0.9600
C3—C41.448 (8)C8—H8B0.9600
C3—N11.454 (5)C8—H8C0.9600
C3—H3A0.9700C9—C101.490 (9)
C3—H3B0.9700C9—H9A0.9700
C4—O11.388 (6)C9—H9B0.9700
C4—C51.397 (7)C10—C111.542 (9)
C4—H40.9800C10—H10A0.9700
C5—C61.446 (10)C10—H10B0.9700
C5—H5A0.9700C11—H11A0.9600
C5—H5B0.9700C11—H11B0.9600
C6—H6A0.9600C11—H11C0.9600
C6—H6B0.9600
C2—C1—Cl2110.5 (3)O1—C7—N1101.8 (3)
C2—C1—Cl1107.8 (3)C9—C7—N1115.5 (4)
Cl2—C1—Cl1111.1 (3)O1—C7—C8109.0 (4)
C2—C1—H1109.1C9—C7—C8109.8 (4)
Cl2—C1—H1109.1N1—C7—C8110.5 (4)
Cl1—C1—H1109.1C7—C8—H8A109.5
O2—C2—N1124.9 (4)C7—C8—H8B109.5
O2—C2—C1120.7 (4)H8A—C8—H8B109.5
N1—C2—C1114.5 (3)C7—C8—H8C109.5
C4—C3—N1104.1 (4)H8A—C8—H8C109.5
C4—C3—H3A110.9H8B—C8—H8C109.5
N1—C3—H3A110.9C10—C9—C7116.0 (5)
C4—C3—H3B110.9C10—C9—H9A108.3
N1—C3—H3B110.9C7—C9—H9A108.3
H3A—C3—H3B108.9C10—C9—H9B108.3
O1—C4—C5119.5 (5)C7—C9—H9B108.3
O1—C4—C3108.1 (4)H9A—C9—H9B107.4
C5—C4—C3126.8 (5)C9—C10—C11111.0 (6)
O1—C4—H497.9C9—C10—H10A109.4
C5—C4—H497.9C11—C10—H10A109.4
C3—C4—H497.9C9—C10—H10B109.4
C4—C5—C6124.7 (6)C11—C10—H10B109.4
C4—C5—H5A106.2H10A—C10—H10B108.0
C6—C5—H5A106.2C10—C11—H11A109.5
C4—C5—H5B106.2C10—C11—H11B109.5
C6—C5—H5B106.2H11A—C11—H11B109.5
H5A—C5—H5B106.3C10—C11—H11C109.5
C5—C6—H6A109.5H11A—C11—H11C109.5
C5—C6—H6B109.5H11B—C11—H11C109.5
H6A—C6—H6B109.5C2—N1—C3127.0 (3)
C5—C6—H6C109.5C2—N1—C7122.6 (3)
H6A—C6—H6C109.5C3—N1—C7110.1 (3)
H6B—C6—H6C109.5C4—O1—C7112.1 (3)
O1—C7—C9109.9 (4)
D—H···AD—HH···AD···AD—H···A
C1—H1···O2i0.982.383.327 (5)163
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C1—H1⋯O2i0.982.383.327 (5)163

Symmetry code: (i) .

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