Literature DB >> 21579388

1,3-Dicyclo-hexyl-1-(4-nitro-benzo-yl)urea.

A N Dhinaa1, R Jagan, K Sivakumar, K Chinnakali.   

Abstract

In the title compound, C(20)H(27)N(3)O(4), both cyclo-hexane rings adopt chair conformations. The benzene ring and the amide group are oriented at a dihedral angle of 62.1 (2)°. In the crystal structure, inter-molecular N-H⋯O and C-H⋯O hydrogen bonds link the mol-ecules into chains propagating in [010], which contain R(2) (2)(12) ring motifs.

Entities:  

Year:  2010        PMID: 21579388      PMCID: PMC2979486          DOI: 10.1107/S1600536810016107

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of benzoyl­urea and N-aroylurea derivatives, see: Song et al. (2008 ▶, 2009 ▶); Amornraksa et al. (2009 ▶). For related N-benzoyl-N,N′-dicyclo­hexyl­urea structures, see: Orea Flores et al. (2006 ▶); Wang & Peng (2008 ▶).

Experimental

Crystal data

C20H27N3O4 M = 373.45 Monoclinic, a = 25.294 (2) Å b = 9.5757 (7) Å c = 16.6943 (14) Å β = 105.140 (2)° V = 3903.1 (5) Å3 Z = 8 Mo Kα radiation μ = 0.09 mm−1 T = 292 K 0.25 × 0.20 × 0.20 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker 1999 ▶) T min = 0.836, T max = 0.982 22623 measured reflections 5012 independent reflections 3152 reflections with I > 2σ(I) R int = 0.031

Refinement

R[F 2 > 2σ(F 2)] = 0.049 wR(F 2) = 0.138 S = 1.02 5012 reflections 244 parameters H-atom parameters constrained Δρmax = 0.15 e Å−3 Δρmin = −0.14 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT-Plus (Bruker, 2004 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810016107/hb5432sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810016107/hb5432Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H27N3O4F(000) = 1600
Mr = 373.45Dx = 1.271 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 4827 reflections
a = 25.294 (2) Åθ = 2.5–23.4°
b = 9.5757 (7) ŵ = 0.09 mm1
c = 16.6943 (14) ÅT = 292 K
β = 105.140 (2)°Block, pale-yellow
V = 3903.1 (5) Å30.25 × 0.20 × 0.20 mm
Z = 8
Bruker Kappa APEXII CCD diffractometer5012 independent reflections
Radiation source: fine-focus sealed tube3152 reflections with I > 2σ(I)
graphiteRint = 0.031
ω and φ scanθmax = 28.7°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Bruker 1999)h = −34→34
Tmin = 0.836, Tmax = 0.982k = −12→12
22623 measured reflectionsl = −22→22
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.049Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.138H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.0549P)2 + 1.482P] where P = (Fo2 + 2Fc2)/3
5012 reflections(Δ/σ)max = 0.001
244 parametersΔρmax = 0.15 e Å3
0 restraintsΔρmin = −0.14 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.18614 (6)0.20858 (14)0.12793 (9)0.0419 (3)
H10.19690.11160.12200.050*
C20.12619 (7)0.2094 (2)0.12851 (11)0.0651 (5)
H2A0.11510.30390.13740.078*
H2B0.12120.15170.17380.078*
C30.09045 (7)0.1538 (3)0.04623 (12)0.0795 (6)
H3A0.09910.05630.04020.095*
H3B0.05220.15960.04660.095*
C40.09915 (8)0.2346 (2)−0.02572 (12)0.0786 (6)
H4A0.08700.3301−0.02280.094*
H4B0.07750.1938−0.07700.094*
C50.15886 (8)0.2338 (2)−0.02557 (11)0.0713 (5)
H5A0.16380.2902−0.07130.086*
H5B0.17000.1391−0.03370.086*
C60.19480 (8)0.29061 (19)0.05559 (10)0.0603 (4)
H6A0.23300.28500.05490.072*
H6B0.18600.38800.06150.072*
C70.25502 (6)0.18506 (14)0.26110 (9)0.0405 (3)
C80.34370 (6)0.27308 (16)0.35126 (10)0.0511 (4)
H80.35450.35510.38690.061*
C90.36104 (7)0.2997 (2)0.27233 (12)0.0665 (5)
H9A0.34360.38410.24600.080*
H9B0.34920.22260.23410.080*
C100.42312 (8)0.3153 (3)0.29111 (15)0.0843 (6)
H10A0.43350.32690.23960.101*
H10B0.43450.39820.32460.101*
C110.45178 (8)0.1898 (3)0.33654 (17)0.0955 (8)
H11A0.49110.20370.34930.115*
H11B0.44270.10810.30130.115*
C120.43525 (8)0.1653 (3)0.41589 (16)0.1003 (8)
H12A0.44710.24340.45320.120*
H12B0.45310.08170.44280.120*
C130.37307 (7)0.1487 (2)0.39846 (13)0.0748 (6)
H13A0.36170.06440.36630.090*
H13B0.36310.13930.45050.090*
C140.25633 (7)0.32416 (15)0.38509 (9)0.0478 (4)
C150.19665 (6)0.29435 (15)0.37139 (9)0.0462 (3)
C160.16036 (8)0.40464 (17)0.36337 (13)0.0689 (5)
H160.17320.49560.36320.083*
C170.10558 (9)0.3818 (2)0.35558 (14)0.0784 (6)
H170.08110.45600.34890.094*
C180.08794 (7)0.2471 (2)0.35787 (11)0.0611 (4)
C190.12263 (7)0.13583 (19)0.36631 (11)0.0599 (4)
H190.10950.04530.36740.072*
C200.17750 (7)0.15920 (16)0.37322 (10)0.0521 (4)
H200.20160.08420.37910.063*
N10.22096 (5)0.26334 (11)0.20560 (7)0.0426 (3)
H1A0.21920.35100.21570.051*
N20.28337 (5)0.25964 (12)0.33451 (7)0.0450 (3)
N30.02944 (8)0.2204 (3)0.35113 (12)0.0897 (6)
O10.26427 (4)0.06149 (10)0.25260 (6)0.0535 (3)
O20.27950 (5)0.40101 (12)0.44180 (7)0.0660 (3)
O30.01453 (7)0.1016 (3)0.35244 (15)0.1366 (8)
O4−0.00053 (8)0.3209 (3)0.34562 (14)0.1356 (8)
U11U22U33U12U13U23
C10.0420 (8)0.0411 (7)0.0381 (8)0.0019 (6)0.0026 (6)−0.0032 (6)
C20.0507 (10)0.0968 (13)0.0464 (10)−0.0144 (9)0.0101 (8)−0.0049 (9)
C30.0459 (10)0.1293 (18)0.0568 (12)−0.0117 (11)0.0016 (8)−0.0154 (12)
C40.0766 (14)0.0941 (14)0.0491 (11)0.0318 (11)−0.0122 (9)−0.0059 (10)
C50.0924 (15)0.0818 (12)0.0369 (9)−0.0024 (10)0.0122 (9)0.0032 (8)
C60.0683 (11)0.0700 (10)0.0455 (9)−0.0077 (9)0.0199 (8)−0.0026 (8)
C70.0382 (7)0.0415 (7)0.0391 (8)−0.0064 (6)0.0052 (6)−0.0011 (6)
C80.0437 (8)0.0566 (8)0.0464 (9)−0.0144 (7)0.0000 (7)−0.0014 (7)
C90.0496 (10)0.0845 (12)0.0617 (11)−0.0081 (9)0.0079 (8)0.0146 (9)
C100.0558 (12)0.1142 (17)0.0825 (15)−0.0205 (11)0.0175 (10)0.0039 (13)
C110.0434 (11)0.1230 (19)0.109 (2)−0.0024 (12)−0.0003 (11)−0.0069 (16)
C120.0559 (12)0.1229 (19)0.1000 (19)−0.0031 (12)−0.0191 (12)0.0269 (15)
C130.0529 (11)0.0874 (13)0.0695 (13)−0.0088 (9)−0.0099 (9)0.0259 (10)
C140.0610 (10)0.0460 (7)0.0338 (8)−0.0122 (7)0.0075 (7)0.0021 (6)
C150.0602 (10)0.0465 (8)0.0329 (7)−0.0064 (7)0.0142 (7)−0.0015 (6)
C160.0856 (14)0.0472 (9)0.0866 (14)0.0010 (8)0.0453 (11)0.0004 (9)
C170.0818 (14)0.0768 (13)0.0902 (15)0.0217 (10)0.0466 (12)0.0135 (11)
C180.0551 (10)0.0856 (12)0.0461 (10)−0.0019 (9)0.0198 (8)0.0029 (8)
C190.0637 (11)0.0619 (10)0.0558 (10)−0.0155 (8)0.0188 (8)−0.0026 (8)
C200.0582 (10)0.0475 (8)0.0505 (9)−0.0055 (7)0.0140 (7)0.0030 (7)
N10.0465 (7)0.0358 (6)0.0405 (7)0.0001 (5)0.0020 (5)−0.0033 (5)
N20.0433 (7)0.0482 (7)0.0384 (7)−0.0094 (5)0.0019 (5)−0.0027 (5)
N30.0614 (12)0.1421 (19)0.0727 (12)−0.0012 (13)0.0299 (9)0.0005 (12)
O10.0563 (7)0.0400 (5)0.0544 (7)0.0028 (4)−0.0028 (5)−0.0017 (5)
O20.0836 (9)0.0709 (7)0.0413 (6)−0.0298 (6)0.0121 (6)−0.0137 (5)
O30.0837 (12)0.1591 (19)0.183 (2)−0.0499 (13)0.0636 (13)−0.0461 (16)
O40.0759 (11)0.192 (2)0.1528 (19)0.0377 (13)0.0546 (12)0.0442 (16)
C1—N11.4613 (17)C10—C111.503 (3)
C1—C61.504 (2)C10—H10A0.97
C1—C21.519 (2)C10—H10B0.97
C1—H10.98C11—C121.508 (4)
C2—C31.530 (2)C11—H11A0.97
C2—H2A0.97C11—H11B0.97
C2—H2B0.97C12—C131.531 (3)
C3—C41.493 (3)C12—H12A0.97
C3—H3A0.97C12—H12B0.97
C3—H3B0.97C13—H13A0.97
C4—C51.510 (3)C13—H13B0.97
C4—H4A0.97C14—O21.2213 (17)
C4—H4B0.97C14—N21.365 (2)
C5—C61.521 (2)C14—C151.494 (2)
C5—H5A0.97C15—C161.383 (2)
C5—H5B0.97C15—C201.385 (2)
C6—H6A0.97C16—C171.375 (3)
C6—H6B0.97C16—H160.93
C7—O11.2217 (16)C17—C181.369 (3)
C7—N11.3213 (18)C17—H170.93
C7—N21.4377 (17)C18—C191.364 (3)
C8—N21.4834 (19)C18—N31.477 (3)
C8—C131.512 (2)C19—C201.381 (2)
C8—C91.515 (2)C19—H190.93
C8—H80.98C20—H200.93
C9—C101.526 (2)N1—H1A0.86
C9—H9A0.97N3—O31.200 (3)
C9—H9B0.97N3—O41.213 (3)
N1—C1—C6110.17 (12)C9—C10—H10A109.4
N1—C1—C2111.33 (12)C11—C10—H10B109.4
C6—C1—C2110.94 (13)C9—C10—H10B109.4
N1—C1—H1108.1H10A—C10—H10B108.0
C6—C1—H1108.1C10—C11—C12111.1 (2)
C2—C1—H1108.1C10—C11—H11A109.4
C1—C2—C3110.45 (15)C12—C11—H11A109.4
C1—C2—H2A109.6C10—C11—H11B109.4
C3—C2—H2A109.6C12—C11—H11B109.4
C1—C2—H2B109.6H11A—C11—H11B108.0
C3—C2—H2B109.6C11—C12—C13110.85 (17)
H2A—C2—H2B108.1C11—C12—H12A109.5
C4—C3—C2111.43 (17)C13—C12—H12A109.5
C4—C3—H3A109.3C11—C12—H12B109.5
C2—C3—H3A109.3C13—C12—H12B109.5
C4—C3—H3B109.3H12A—C12—H12B108.1
C2—C3—H3B109.3C8—C13—C12110.96 (16)
H3A—C3—H3B108.0C8—C13—H13A109.4
C3—C4—C5110.71 (15)C12—C13—H13A109.4
C3—C4—H4A109.5C8—C13—H13B109.4
C5—C4—H4A109.5C12—C13—H13B109.4
C3—C4—H4B109.5H13A—C13—H13B108.0
C5—C4—H4B109.5O2—C14—N2122.40 (15)
H4A—C4—H4B108.1O2—C14—C15119.65 (15)
C4—C5—C6111.38 (16)N2—C14—C15117.92 (12)
C4—C5—H5A109.4C16—C15—C20119.26 (16)
C6—C5—H5A109.4C16—C15—C14119.19 (14)
C4—C5—H5B109.4C20—C15—C14121.35 (14)
C6—C5—H5B109.4C17—C16—C15120.97 (16)
H5A—C5—H5B108.0C17—C16—H16119.5
C1—C6—C5110.49 (14)C15—C16—H16119.5
C1—C6—H6A109.6C18—C17—C16118.38 (17)
C5—C6—H6A109.6C18—C17—H17120.8
C1—C6—H6B109.6C16—C17—H17120.8
C5—C6—H6B109.6C19—C18—C17122.23 (17)
H6A—C6—H6B108.1C19—C18—N3118.54 (18)
O1—C7—N1125.28 (13)C17—C18—N3119.23 (19)
O1—C7—N2120.81 (12)C18—C19—C20119.19 (16)
N1—C7—N2113.87 (12)C18—C19—H19120.4
N2—C8—C13111.79 (13)C20—C19—H19120.4
N2—C8—C9111.58 (12)C19—C20—C15119.96 (16)
C13—C8—C9111.80 (16)C19—C20—H20120.0
N2—C8—H8107.1C15—C20—H20120.0
C13—C8—H8107.1C7—N1—C1123.38 (11)
C9—C8—H8107.1C7—N1—H1A118.3
C8—C9—C10110.73 (15)C1—N1—H1A118.3
C8—C9—H9A109.5C14—N2—C7122.22 (12)
C10—C9—H9A109.5C14—N2—C8120.06 (12)
C8—C9—H9B109.5C7—N2—C8117.59 (12)
C10—C9—H9B109.5O3—N3—O4124.0 (2)
H9A—C9—H9B108.1O3—N3—C18118.4 (2)
C11—C10—C9111.10 (17)O4—N3—C18117.5 (2)
C11—C10—H10A109.4
N1—C1—C2—C3179.16 (15)C17—C18—C19—C200.3 (3)
C6—C1—C2—C356.1 (2)N3—C18—C19—C20−179.59 (16)
C1—C2—C3—C4−56.0 (2)C18—C19—C20—C15−0.1 (3)
C2—C3—C4—C556.1 (2)C16—C15—C20—C190.6 (2)
C3—C4—C5—C6−56.5 (2)C14—C15—C20—C19175.33 (14)
N1—C1—C6—C5179.75 (13)O1—C7—N1—C14.9 (2)
C2—C1—C6—C5−56.51 (19)N2—C7—N1—C1−177.33 (12)
C4—C5—C6—C156.7 (2)C6—C1—N1—C7−126.35 (15)
N2—C8—C9—C10179.16 (15)C2—C1—N1—C7110.13 (16)
C13—C8—C9—C10−54.8 (2)O2—C14—N2—C7−171.22 (13)
C8—C9—C10—C1155.8 (2)C15—C14—N2—C710.96 (19)
C9—C10—C11—C12−57.2 (3)O2—C14—N2—C84.6 (2)
C10—C11—C12—C1356.8 (3)C15—C14—N2—C8−173.21 (12)
N2—C8—C13—C12−179.41 (17)O1—C7—N2—C14−121.45 (16)
C9—C8—C13—C1254.7 (2)N1—C7—N2—C1460.66 (18)
C11—C12—C13—C8−55.3 (3)O1—C7—N2—C862.63 (18)
O2—C14—C15—C1653.2 (2)N1—C7—N2—C8−115.27 (14)
N2—C14—C15—C16−128.91 (16)C13—C8—N2—C1497.56 (18)
O2—C14—C15—C20−121.55 (17)C9—C8—N2—C14−136.42 (15)
N2—C14—C15—C2056.33 (19)C13—C8—N2—C7−86.42 (17)
C20—C15—C16—C17−1.3 (3)C9—C8—N2—C739.60 (18)
C14—C15—C16—C17−176.15 (17)C19—C18—N3—O3−0.8 (3)
C15—C16—C17—C181.5 (3)C17—C18—N3—O3179.3 (2)
C16—C17—C18—C19−1.0 (3)C19—C18—N3—O4178.3 (2)
C16—C17—C18—N3178.90 (17)C17—C18—N3—O4−1.6 (3)
D—H···AD—HH···AD···AD—H···A
N1—H1A···O1i0.862.102.9396 (15)166
C1—H1···O2ii0.982.433.3636 (18)160
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯O1i0.862.102.9396 (15)166
C1—H1⋯O2ii0.982.433.3636 (18)160

Symmetry codes: (i) ; (ii) .

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