Literature DB >> 21579348

catena-Poly[[diaqua-manganese(II)]-μ-7-oxabicyclo-[2.2.1]heptane-2,3-dicarboxyl-ato].

Na Wang, Jie Feng, Dong-Hang Wang, Qiu-Yue Lin.   

Abstract

In the title polymer, [Mn(C(8)H(8)O(5))(H(2)O)(2)](n), the Mn(II) atom is in a distorted octa-hedral coordination mode, binding to the bridging O atom of the bicyclo-heptane unit, two O atoms from corresponding carboxyl-ate groups, one carboxyl-ate O atom from a symmetry-related bridging ligand and two water O atoms. This arrangement leads to the formation of polymeric chains propagating parallel to [001]. The crystal structure is stabilized by several O-H⋯O hydrogen-bonding inter-actions involving the coordinated water mol-ecules as donors and the carboxyl-ate O atoms as acceptors.

Entities:  

Year:  2010        PMID: 21579348      PMCID: PMC2979419          DOI: 10.1107/S1600536810019021

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

7-Oxabicyclo­[2.2.1]heptane-2,3-dicarb­oxy­lic anhydride (nor­can­tharidin) is a lower toxicity anti­cancer drug, see: Shimi et al. (1982 ▶). For the preparation of disodium demethyl­cantharate, see: Yin et al. (2003 ▶).

Experimental

Crystal data

[Mn(C8H8O5)(H2O)2] M = 275.12 Orthorhombic, a = 10.3513 (2) Å b = 18.9903 (4) Å c = 10.4899 (5) Å V = 2062.04 (11) Å3 Z = 8 Mo Kα radiation μ = 1.30 mm−1 T = 296 K 0.37 × 0.22 × 0.14 mm

Data collection

Bruker APEXII area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.722, T max = 0.838 14198 measured reflections 2401 independent reflections 2196 reflections with I > 2σ(I) R int = 0.030

Refinement

R[F 2 > 2σ(F 2)] = 0.024 wR(F 2) = 0.057 S = 1.02 2401 reflections 157 parameters 7 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.21 e Å−3 Δρmin = −0.28 e Å−3 Absolute structure: Flack (1983 ▶), 1171 Friedel pairs Flack parameter: 0.019 (15) Data collection: APEX2 (Bruker, 2006 ▶); cell refinement: SAINT (Bruker, 2006 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810019021/wm2346sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810019021/wm2346Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Mn(C8H8O5)(H2O)2]F(000) = 1128
Mr = 275.12Dx = 1.772 Mg m3
Orthorhombic, Iba2Mo Kα radiation, λ = 0.71073 Å
Hall symbol: I 2 -2cCell parameters from 6907 reflections
a = 10.3513 (2) Åθ = 2.1–27.8°
b = 18.9903 (4) ŵ = 1.30 mm1
c = 10.4899 (5) ÅT = 296 K
V = 2062.04 (11) Å3Block, colourless
Z = 80.37 × 0.22 × 0.14 mm
Bruker APEXII area-detector diffractometer2401 independent reflections
Radiation source: fine-focus sealed tube2196 reflections with I > 2σ(I)
graphiteRint = 0.030
ω scansθmax = 27.8°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −13→12
Tmin = 0.722, Tmax = 0.838k = −23→24
14198 measured reflectionsl = −13→13
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.024H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.057w = 1/[σ2(Fo2) + (0.0349P)2] where P = (Fo2 + 2Fc2)/3
S = 1.02(Δ/σ)max = 0.001
2401 reflectionsΔρmax = 0.21 e Å3
157 parametersΔρmin = −0.28 e Å3
7 restraintsAbsolute structure: Flack (1983), 1171 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.019 (15)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Mn10.23964 (2)0.466637 (12)0.21088 (5)0.02642 (8)
O10.37728 (10)0.37412 (6)0.22354 (12)0.0264 (3)
O30.35327 (13)0.46639 (7)0.59926 (14)0.0309 (3)
C80.35590 (15)0.45297 (10)0.48293 (17)0.0235 (4)
O1W0.12217 (13)0.56135 (8)0.23773 (15)0.0428 (4)
C60.28402 (16)0.32972 (9)0.4091 (2)0.0266 (4)
H6A0.28560.28790.46360.032*
O50.08680 (12)0.35748 (7)0.51658 (13)0.0365 (3)
O20.32170 (11)0.49510 (7)0.39659 (14)0.0300 (3)
O40.11371 (12)0.40095 (7)0.32282 (15)0.0359 (3)
C50.40058 (15)0.37989 (9)0.44426 (17)0.0250 (4)
H5A0.45190.35890.51300.030*
C70.15121 (15)0.36557 (9)0.41784 (18)0.0255 (4)
O2W0.15899 (16)0.41688 (10)0.04225 (15)0.0490 (4)
C40.47817 (16)0.37949 (10)0.31993 (18)0.0289 (4)
H4A0.53440.42060.30940.035*
C10.32042 (18)0.30945 (10)0.27210 (19)0.0309 (4)
H1A0.24710.29260.22150.037*
C30.54794 (18)0.30928 (12)0.3051 (2)0.0394 (5)
H3A0.59040.29550.38370.047*
H3B0.61120.31110.23700.047*
C20.4359 (2)0.25889 (11)0.2721 (2)0.0439 (5)
H2A0.44810.23730.18920.053*
H2B0.42620.22240.33610.053*
H2WA0.0832 (18)0.4022 (14)0.017 (3)0.066*
H1WA0.0462 (18)0.5712 (14)0.268 (2)0.066*
H2WB0.193 (2)0.4298 (16)−0.022 (2)0.066*
H1WB0.125 (2)0.5871 (13)0.176 (2)0.066*
U11U22U33U12U13U23
Mn10.02597 (12)0.02875 (14)0.02454 (14)−0.00026 (9)0.00046 (14)0.00452 (15)
O10.0268 (5)0.0279 (6)0.0246 (7)0.0008 (4)0.0014 (5)−0.0003 (6)
O30.0305 (6)0.0387 (7)0.0235 (7)0.0061 (5)−0.0003 (5)−0.0052 (5)
C80.0159 (7)0.0306 (9)0.0240 (10)−0.0027 (6)0.0019 (7)−0.0023 (8)
O1W0.0354 (7)0.0479 (9)0.0452 (10)0.0157 (6)0.0108 (6)0.0147 (7)
C60.0284 (8)0.0222 (8)0.0292 (10)−0.0010 (7)0.0010 (7)0.0041 (8)
O50.0320 (7)0.0453 (8)0.0321 (8)0.0008 (6)0.0049 (6)0.0033 (6)
O20.0379 (7)0.0265 (6)0.0257 (7)0.0034 (6)−0.0002 (6)0.0008 (6)
O40.0233 (6)0.0449 (8)0.0395 (9)0.0013 (6)0.0017 (6)0.0161 (7)
C50.0218 (8)0.0282 (9)0.0250 (10)0.0026 (7)−0.0014 (7)−0.0011 (8)
C70.0228 (8)0.0243 (9)0.0294 (10)−0.0053 (7)−0.0008 (7)0.0013 (8)
O2W0.0458 (9)0.0724 (11)0.0289 (8)−0.0249 (8)−0.0036 (7)0.0029 (8)
C40.0210 (8)0.0357 (10)0.0301 (11)0.0036 (7)0.0013 (7)−0.0052 (8)
C10.0345 (9)0.0256 (9)0.0325 (10)−0.0025 (7)−0.0015 (8)−0.0038 (8)
C30.0342 (10)0.0475 (12)0.0365 (12)0.0185 (9)0.0023 (9)−0.0050 (10)
C20.0553 (13)0.0305 (11)0.0461 (13)0.0136 (9)0.0063 (11)−0.0045 (10)
Mn1—O3i2.0910 (13)C6—H6A0.9800
Mn1—O42.1527 (13)O5—C71.241 (2)
Mn1—O2W2.1722 (16)O4—C71.263 (2)
Mn1—O1W2.1892 (13)C5—C41.532 (2)
Mn1—O22.1929 (15)C5—H5A0.9800
Mn1—O12.2660 (11)O2W—H2WA0.875 (16)
O1—C11.454 (2)O2W—H2WB0.800 (17)
O1—C41.457 (2)C4—C31.524 (3)
O3—C81.247 (2)C4—H4A0.9800
O3—Mn1ii2.0910 (13)C1—C21.534 (3)
C8—O21.259 (2)C1—H1A0.9800
C8—C51.518 (2)C3—C21.543 (3)
O1W—H1WA0.867 (15)C3—H3A0.9700
O1W—H1WB0.815 (16)C3—H3B0.9700
C6—C11.534 (3)C2—H2A0.9700
C6—C71.537 (2)C2—H2B0.9700
C6—C51.581 (2)
O3i—Mn1—O4176.92 (5)C4—C5—C6101.44 (14)
O3i—Mn1—O2W91.42 (6)C8—C5—H5A109.9
O4—Mn1—O2W87.68 (6)C4—C5—H5A109.9
O3i—Mn1—O1W83.39 (5)C6—C5—H5A109.9
O4—Mn1—O1W93.99 (5)O5—C7—O4123.99 (16)
O2W—Mn1—O1W104.40 (7)O5—C7—C6118.40 (16)
O3i—Mn1—O297.45 (5)O4—C7—C6117.60 (16)
O4—Mn1—O283.84 (6)Mn1—O2W—H2WA137.1 (18)
O2W—Mn1—O2168.38 (6)Mn1—O2W—H2WB113 (2)
O1W—Mn1—O284.17 (6)H2WA—O2W—H2WB103 (2)
O3i—Mn1—O198.67 (5)O1—C4—C3101.98 (14)
O4—Mn1—O184.23 (4)O1—C4—C5102.44 (13)
O2W—Mn1—O187.25 (6)C3—C4—C5109.84 (16)
O1W—Mn1—O1168.16 (6)O1—C4—H4A113.8
O2—Mn1—O184.00 (5)C3—C4—H4A113.8
C1—O1—C496.10 (13)C5—C4—H4A113.8
C1—O1—Mn1114.89 (9)O1—C1—C2102.31 (15)
C4—O1—Mn1115.91 (9)O1—C1—C6102.45 (14)
C8—O3—Mn1ii133.21 (12)C2—C1—C6110.39 (16)
O3—C8—O2124.60 (17)O1—C1—H1A113.5
O3—C8—C5117.07 (16)C2—C1—H1A113.5
O2—C8—C5118.31 (16)C6—C1—H1A113.5
Mn1—O1W—H1WA136.7 (17)C4—C3—C2102.08 (15)
Mn1—O1W—H1WB112.0 (19)C4—C3—H3A111.4
H1WA—O1W—H1WB100.8 (19)C2—C3—H3A111.4
C1—C6—C7112.76 (16)C4—C3—H3B111.4
C1—C6—C5100.51 (14)C2—C3—H3B111.4
C7—C6—C5113.69 (14)H3A—C3—H3B109.2
C1—C6—H6A109.8C1—C2—C3101.40 (15)
C7—C6—H6A109.8C1—C2—H2A111.5
C5—C6—H6A109.8C3—C2—H2A111.5
C8—O2—Mn1126.25 (12)C1—C2—H2B111.5
C7—O4—Mn1123.55 (11)C3—C2—H2B111.5
C8—C5—C4113.07 (15)H2A—C2—H2B109.3
C8—C5—C6112.38 (13)
O3i—Mn1—O1—C1−167.13 (12)C1—C6—C5—C41.19 (16)
O4—Mn1—O1—C111.83 (12)C7—C6—C5—C4−119.54 (17)
O2W—Mn1—O1—C1−76.11 (12)Mn1—O4—C7—O5141.81 (15)
O1W—Mn1—O1—C193.7 (3)Mn1—O4—C7—C6−39.0 (2)
O2—Mn1—O1—C196.22 (12)C1—C6—C7—O5149.40 (16)
O3i—Mn1—O1—C482.04 (11)C5—C6—C7—O5−97.02 (19)
O4—Mn1—O1—C4−99.00 (11)C1—C6—C7—O4−29.8 (2)
O2W—Mn1—O1—C4173.06 (12)C5—C6—C7—O483.8 (2)
O1W—Mn1—O1—C4−17.1 (3)C1—O1—C4—C356.75 (16)
O2—Mn1—O1—C4−14.61 (11)Mn1—O1—C4—C3178.24 (11)
Mn1ii—O3—C8—O227.8 (3)C1—O1—C4—C5−56.96 (15)
Mn1ii—O3—C8—C5−150.61 (12)Mn1—O1—C4—C564.53 (14)
O3—C8—O2—Mn1−150.12 (13)C8—C5—C4—O1−86.60 (16)
C5—C8—O2—Mn128.30 (19)C6—C5—C4—O133.96 (16)
O3i—Mn1—O2—C8−133.89 (13)C8—C5—C4—C3165.60 (15)
O4—Mn1—O2—C848.92 (13)C6—C5—C4—C3−73.84 (17)
O2W—Mn1—O2—C85.5 (4)C4—O1—C1—C2−56.40 (16)
O1W—Mn1—O2—C8143.59 (13)Mn1—O1—C1—C2−178.67 (11)
O1—Mn1—O2—C8−35.89 (13)C4—O1—C1—C658.02 (14)
O2W—Mn1—O4—C7131.49 (16)Mn1—O1—C1—C6−64.25 (15)
O1W—Mn1—O4—C7−124.24 (15)C7—C6—C1—O185.26 (17)
O2—Mn1—O4—C7−40.55 (15)C5—C6—C1—O1−36.13 (16)
O1—Mn1—O4—C744.01 (15)C7—C6—C1—C2−166.38 (15)
O3—C8—C5—C4−144.55 (16)C5—C6—C1—C272.23 (17)
O2—C8—C5—C436.9 (2)O1—C4—C3—C2−35.23 (18)
O3—C8—C5—C6101.34 (18)C5—C4—C3—C272.87 (18)
O2—C8—C5—C6−77.21 (19)O1—C1—C2—C334.25 (19)
C1—C6—C5—C8122.23 (15)C6—C1—C2—C3−74.20 (19)
C7—C6—C5—C81.5 (2)C4—C3—C2—C10.64 (19)
D—H···AD—HH···AD···AD—H···A
O1W—H1WA···O4iii0.87 (2)1.83 (2)2.6965 (17)175 (3)
O2W—H2WA···O5iv0.88 (2)1.95 (2)2.796 (2)161 (3)
O1W—H1WB···O5i0.82 (2)2.01 (2)2.809 (2)166 (3)
O2W—H2WB···O2i0.80 (2)2.13 (2)2.822 (2)145 (3)
Table 1

Selected bond lengths (Å)

Mn1—O3i2.0910 (13)
Mn1—O42.1527 (13)
Mn1—O2W2.1722 (16)
Mn1—O1W2.1892 (13)
Mn1—O22.1929 (15)
Mn1—O12.2660 (11)

Symmetry code: (i) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1W—H1WA⋯O4ii0.87 (2)1.83 (2)2.6965 (17)175 (3)
O2W—H2WA⋯O5iii0.88 (2)1.95 (2)2.796 (2)161 (3)
O1W—H1WB⋯O5i0.82 (2)2.01 (2)2.809 (2)166 (3)
O2W—H2WB⋯O2i0.80 (2)2.13 (2)2.822 (2)145 (3)

Symmetry codes: (i) ; (ii) ; (iii) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  A new antitumour substance, 7-oxabicyclo (2.2.1)-5-heptene-2,3-dicarboxylic anhydride.

Authors:  I R Shimi; Z Zaki; S Shoukry; A M Medhat
Journal:  Eur J Cancer Clin Oncol       Date:  1982-08
  2 in total

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