Literature DB >> 21579322

Tetra-imidazole-bis(trichloro-acetato)copper(II).

Li-Min Li, Huan-Mei Guo, Fang-Fang Jian, Zeng-Hui Zhang, Ning Zhang.   

Abstract

The title compound, [Cu(C(2)Cl(3)O(2))(2)(C(3)H(4)N(2))(4)], was prepared by the reaction of imidazole and trichloro-acetatocopper(II). The Cu(II) atom adopts a distorted octa-hedral coordination geometry, binding the N atoms of four imidazole ligands and the carboxyl-ate O atoms of two trichloro-acetate anions. The mol-ecular structure and packing are stabilized by N-H⋯O hydrogen-bonding inter-actions. Close inter-molecular Cl⋯Cl contacts [3.498 (3) Å] are also found in the structure.

Entities:  

Year:  2010        PMID: 21579322      PMCID: PMC2979359          DOI: 10.1107/S1600536810017459

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to work on metal-organic frameworks, see: Chen et al. (2001 ▶); Fang et al. (2005 ▶). For a related structure, see: Moncol et al. (2007 ▶).

Experimental

Crystal data

[Cu(C2Cl3O2)2(C3H4N2)4] M = 660.61 Triclinic, a = 10.054 (2) Å b = 10.539 (2) Å c = 12.959 (3) Å α = 108.12 (3)° β = 92.93 (3)° γ = 95.18 (3)° V = 1295.2 (4) Å3 Z = 2 Mo Kα radiation μ = 1.50 mm−1 T = 293 K 0.22 × 0.20 × 0.18 mm

Data collection

Bruker SMART CCD area-detector diffractometer 12377 measured reflections 5823 independent reflections 5048 reflections with I > 2σ(I) R int = 0.053

Refinement

R[F 2 > 2σ(F 2)] = 0.055 wR(F 2) = 0.168 S = 1.05 5823 reflections 316 parameters H-atom parameters constrained Δρmax = 1.43 e Å−3 Δρmin = −0.86 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810017459/sj2779sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810017459/sj2779Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C2Cl3O2)2(C3H4N2)4]Z = 2
Mr = 660.61F(000) = 662
Triclinic, P1Dx = 1.694 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 10.054 (2) ÅCell parameters from 2238 reflections
b = 10.539 (2) Åθ = 2.1–26.3°
c = 12.959 (3) ŵ = 1.50 mm1
α = 108.12 (3)°T = 293 K
β = 92.93 (3)°Rod, blue
γ = 95.18 (3)°0.22 × 0.20 × 0.18 mm
V = 1295.2 (4) Å3
Bruker SMART CCD area-detector diffractometer5048 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.053
graphiteθmax = 27.5°, θmin = 3.0°
φ and ω scansh = −13→10
12377 measured reflectionsk = −13→13
5823 independent reflectionsl = −16→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.055Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.168H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.1013P)2 + 0.8989P] where P = (Fo2 + 2Fc2)/3
5823 reflections(Δ/σ)max < 0.001
316 parametersΔρmax = 1.43 e Å3
0 restraintsΔρmin = −0.85 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.26177 (3)0.25376 (3)0.24476 (3)0.02655 (14)
Cl10.41741 (11)−0.13876 (10)0.38566 (9)0.0542 (3)
Cl4−0.12008 (10)0.61045 (11)0.09196 (10)0.0593 (3)
Cl60.14287 (9)0.67968 (9)0.19926 (13)0.0687 (4)
Cl20.44972 (12)−0.16467 (11)0.16082 (9)0.0619 (3)
Cl30.67814 (10)−0.15040 (9)0.30617 (13)0.0744 (4)
Cl5−0.08098 (15)0.63279 (11)0.31833 (10)0.0716 (4)
N70.2999 (2)0.3951 (2)0.3900 (2)0.0290 (5)
N30.2209 (2)0.1099 (2)0.1006 (2)0.0296 (5)
N10.1157 (2)0.1667 (2)0.3089 (2)0.0294 (5)
O10.6441 (2)0.1316 (2)0.3576 (2)0.0412 (6)
O30.1177 (2)0.4023 (2)0.1870 (2)0.0390 (5)
C160.0052 (3)0.4292 (3)0.1668 (2)0.0271 (6)
N50.4180 (2)0.3358 (2)0.1859 (2)0.0269 (5)
C140.5229 (3)−0.0894 (3)0.2966 (3)0.0349 (7)
N80.3302 (3)0.5850 (3)0.5243 (2)0.0424 (7)
H8A0.33490.66950.55910.051*
C15−0.0107 (3)0.5819 (3)0.1915 (3)0.0357 (7)
C40.1621 (3)−0.0146 (3)0.0788 (3)0.0377 (7)
H4A0.1307−0.05070.13110.045*
C3−0.0074 (3)0.1991 (3)0.3191 (3)0.0335 (6)
H3A−0.03900.27080.30180.040*
N60.6185 (2)0.3773 (3)0.1383 (2)0.0337 (6)
H6A0.70060.36860.12450.040*
O20.4247 (2)0.1096 (2)0.3115 (2)0.0460 (6)
C120.2979 (4)0.5269 (3)0.4173 (3)0.0394 (7)
H12A0.27690.57270.36890.047*
N2−0.0805 (3)0.1150 (3)0.3579 (2)0.0376 (6)
H2A−0.16330.11840.37130.045*
C130.5316 (3)0.0686 (3)0.3258 (3)0.0294 (6)
C90.5368 (3)0.2938 (3)0.1716 (3)0.0313 (6)
H9A0.56080.21590.18330.038*
C10.1205 (3)0.0559 (3)0.3430 (3)0.0399 (7)
H1A0.19570.01120.34540.048*
N40.1536 (3)−0.0808 (3)−0.0272 (3)0.0433 (7)
H4B0.1195−0.1626−0.05810.052*
C80.5480 (3)0.4792 (3)0.1302 (3)0.0424 (8)
H8B0.57890.55220.10860.051*
C2−0.0014 (3)0.0224 (4)0.3726 (3)0.0438 (8)
H2B−0.0262−0.04910.39780.053*
C70.4245 (3)0.4526 (3)0.1596 (3)0.0381 (7)
H7A0.35460.50520.16180.046*
C110.3542 (4)0.4870 (4)0.5681 (3)0.0456 (8)
H11A0.37850.49800.64090.055*
C60.2081 (5)0.0029 (5)−0.0779 (3)0.0653 (13)
H6B0.2160−0.0161−0.15230.078*
C50.2490 (5)0.1207 (4)0.0017 (3)0.0543 (10)
H5A0.29020.1974−0.00950.065*
C100.3354 (4)0.3696 (3)0.4845 (3)0.0405 (7)
H10A0.34520.28520.49040.049*
O4−0.1012 (2)0.3534 (2)0.1345 (2)0.0390 (6)
U11U22U33U12U13U23
Cu10.0222 (2)0.0225 (2)0.0301 (2)−0.00600 (13)0.00312 (13)0.00353 (15)
Cl10.0542 (6)0.0461 (5)0.0682 (6)−0.0106 (4)0.0040 (4)0.0314 (4)
Cl40.0390 (5)0.0648 (6)0.0921 (8)0.0136 (4)−0.0025 (5)0.0498 (6)
Cl60.0311 (5)0.0322 (5)0.1425 (12)−0.0079 (3)−0.0069 (5)0.0329 (5)
Cl20.0673 (7)0.0517 (6)0.0537 (6)−0.0014 (5)0.0007 (5)0.0010 (4)
Cl30.0299 (5)0.0347 (5)0.1577 (13)0.0097 (4)−0.0054 (6)0.0295 (6)
Cl50.0955 (9)0.0523 (6)0.0649 (7)0.0291 (6)0.0273 (6)0.0068 (5)
N70.0274 (12)0.0239 (12)0.0307 (12)−0.0021 (9)0.0016 (9)0.0032 (9)
N30.0265 (12)0.0227 (12)0.0352 (13)−0.0011 (9)0.0000 (9)0.0045 (9)
N10.0220 (12)0.0265 (12)0.0366 (13)−0.0031 (9)0.0016 (9)0.0072 (10)
O10.0255 (11)0.0243 (11)0.0680 (16)−0.0004 (8)0.0045 (10)0.0072 (10)
O30.0243 (11)0.0312 (11)0.0648 (16)0.0079 (9)−0.0020 (10)0.0193 (10)
C160.0235 (13)0.0207 (13)0.0377 (15)0.0043 (10)0.0042 (10)0.0096 (10)
N50.0215 (11)0.0241 (11)0.0319 (12)−0.0026 (9)0.0001 (9)0.0059 (9)
C140.0225 (14)0.0250 (14)0.056 (2)0.0005 (11)−0.0017 (12)0.0128 (13)
N80.0403 (16)0.0304 (14)0.0435 (16)−0.0018 (11)0.0021 (12)−0.0050 (12)
C150.0238 (14)0.0259 (14)0.058 (2)0.0039 (11)0.0032 (13)0.0142 (13)
C40.0408 (18)0.0237 (14)0.0433 (18)−0.0025 (12)0.0015 (13)0.0049 (12)
C30.0240 (14)0.0353 (16)0.0424 (17)0.0007 (11)0.0042 (11)0.0144 (13)
N60.0193 (12)0.0384 (14)0.0436 (15)0.0014 (10)0.0066 (10)0.0132 (11)
O20.0285 (12)0.0370 (13)0.0778 (19)0.0111 (10)0.0030 (11)0.0239 (12)
C120.0413 (18)0.0271 (15)0.0458 (19)0.0002 (13)−0.0012 (14)0.0075 (13)
N20.0210 (12)0.0474 (16)0.0459 (15)−0.0026 (11)0.0043 (10)0.0184 (12)
C130.0260 (14)0.0209 (13)0.0437 (16)0.0048 (10)0.0085 (11)0.0121 (11)
C90.0257 (14)0.0303 (14)0.0398 (16)0.0050 (11)0.0042 (11)0.0132 (12)
C10.0252 (15)0.0426 (18)0.059 (2)0.0046 (13)0.0035 (13)0.0259 (15)
N40.0420 (16)0.0270 (14)0.0465 (17)−0.0031 (11)−0.0039 (12)−0.0062 (12)
C80.0301 (16)0.0394 (18)0.067 (2)0.0030 (13)0.0102 (15)0.0290 (16)
C20.0341 (18)0.049 (2)0.056 (2)−0.0062 (14)0.0003 (14)0.0309 (17)
C70.0255 (15)0.0341 (16)0.062 (2)0.0053 (12)0.0068 (13)0.0243 (15)
C110.049 (2)0.048 (2)0.0307 (16)−0.0056 (16)0.0007 (13)0.0033 (14)
C60.087 (3)0.059 (3)0.0338 (19)−0.020 (2)0.0015 (19)−0.0010 (18)
C50.073 (3)0.047 (2)0.0355 (18)−0.0206 (19)−0.0033 (17)0.0105 (15)
C100.048 (2)0.0372 (17)0.0346 (16)0.0008 (14)0.0011 (13)0.0101 (13)
O40.0229 (10)0.0261 (11)0.0637 (16)−0.0024 (8)−0.0011 (9)0.0102 (10)
Cu1—N71.997 (2)N8—H8A0.8600
Cu1—N32.001 (2)C4—N41.327 (4)
Cu1—N12.011 (3)C4—H4A0.9300
Cu1—N52.022 (3)C3—N21.333 (4)
Cu1—O32.479 (2)C3—H3A0.9300
Cu1—O22.618 (2)N6—C91.333 (4)
Cl1—C141.768 (4)N6—C81.367 (4)
Cl4—C151.767 (4)N6—H6A0.8600
Cl6—C151.757 (3)O2—C131.220 (4)
Cl2—C141.778 (4)C12—H12A0.9300
Cl3—C141.754 (3)N2—C21.364 (5)
Cl5—C151.768 (4)N2—H2A0.8600
N7—C121.325 (4)C9—H9A0.9300
N7—C101.370 (4)C1—C21.353 (5)
N3—C41.328 (4)C1—H1A0.9300
N3—C51.362 (5)N4—C61.350 (6)
N1—C31.316 (4)N4—H4B0.8600
N1—C11.375 (4)C8—C71.348 (5)
O1—C131.240 (4)C8—H8B0.9300
O3—C161.226 (4)C2—H2B0.9300
C16—O41.245 (4)C7—H7A0.9300
C16—C151.565 (4)C11—C101.358 (5)
N5—C91.312 (4)C11—H11A0.9300
N5—C71.372 (4)C6—C51.357 (5)
C14—C131.582 (4)C6—H6B0.9300
N8—C121.339 (5)C5—H5A0.9300
N8—C111.358 (5)C10—H10A0.9300
N7—Cu1—N3178.78 (10)N3—C4—H4A124.3
N7—Cu1—N187.99 (10)N1—C3—N2110.6 (3)
N3—Cu1—N190.80 (11)N1—C3—H3A124.7
N7—Cu1—N591.08 (10)N2—C3—H3A124.7
N3—Cu1—N590.11 (10)C9—N6—C8107.4 (3)
N1—Cu1—N5175.95 (10)C9—N6—H6A126.3
N7—Cu1—O388.90 (10)C8—N6—H6A126.3
N3—Cu1—O391.37 (9)N7—C12—N8110.6 (3)
N1—Cu1—O395.17 (9)N7—C12—H12A124.7
N5—Cu1—O388.70 (9)N8—C12—H12A124.7
N7—Cu1—O288.42 (10)C3—N2—C2108.2 (3)
N3—Cu1—O291.36 (10)C3—N2—H2A125.9
N1—Cu1—O287.03 (9)C2—N2—H2A125.9
N5—Cu1—O289.06 (9)O2—C13—O1129.8 (3)
O3—Cu1—O2176.47 (7)O2—C13—C14113.8 (3)
C12—N7—C10105.8 (3)O1—C13—C14116.3 (2)
C12—N7—Cu1130.0 (2)N5—C9—N6111.3 (3)
C10—N7—Cu1124.2 (2)N5—C9—H9A124.4
C4—N3—C5104.8 (3)N6—C9—H9A124.4
C4—N3—Cu1129.0 (2)C2—C1—N1109.2 (3)
C5—N3—Cu1126.2 (2)C2—C1—H1A125.4
C3—N1—C1106.1 (3)N1—C1—H1A125.4
C3—N1—Cu1126.4 (2)C4—N4—C6107.9 (3)
C1—N1—Cu1127.3 (2)C4—N4—H4B126.0
O3—C16—O4129.6 (3)C6—N4—H4B126.0
O3—C16—C15116.0 (3)C7—C8—N6106.1 (3)
O4—C16—C15114.3 (2)C7—C8—H8B126.9
C9—N5—C7105.8 (3)N6—C8—H8B126.9
C9—N5—Cu1127.4 (2)C1—C2—N2105.9 (3)
C7—N5—Cu1126.8 (2)C1—C2—H2B127.0
C13—C14—Cl3114.2 (2)N2—C2—H2B127.0
C13—C14—Cl1108.4 (2)C8—C7—N5109.4 (3)
Cl3—C14—Cl1108.81 (19)C8—C7—H7A125.3
C13—C14—Cl2108.8 (2)N5—C7—H7A125.3
Cl3—C14—Cl2107.99 (19)C10—C11—N8106.2 (3)
Cl1—C14—Cl2108.56 (17)C10—C11—H11A126.9
C12—N8—C11108.0 (3)N8—C11—H11A126.9
C12—N8—H8A126.0N4—C6—C5105.9 (4)
C11—N8—H8A126.0N4—C6—H6B127.0
C16—C15—Cl6112.6 (2)C5—C6—H6B127.0
C16—C15—Cl4111.9 (2)C6—C5—N3110.0 (4)
Cl6—C15—Cl4107.7 (2)C6—C5—H5A125.0
C16—C15—Cl5106.0 (2)N3—C5—H5A125.0
Cl6—C15—Cl5109.80 (19)C11—C10—N7109.4 (3)
Cl4—C15—Cl5108.70 (17)C11—C10—H10A125.3
N4—C4—N3111.3 (3)N7—C10—H10A125.3
N4—C4—H4A124.3
D—H···AD—HH···AD···AD—H···A
N8—H8A···O1i0.862.032.885 (3)177
N6—H6A···O4ii0.862.022.854 (3)164
N2—H2A···O1iii0.861.962.790 (3)162
N4—H4B···O4iv0.861.932.764 (3)162
Table 1

Selected bond lengths (Å)

Cu1—N71.997 (2)
Cu1—N32.001 (2)
Cu1—N12.011 (3)
Cu1—N52.022 (3)
Cu1—O32.479 (2)
Cu1—O22.618 (2)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N8—H8A⋯O1i0.862.032.885 (3)177
N6—H6A⋯O4ii0.862.022.854 (3)164
N2—H2A⋯O1iii0.861.962.790 (3)162
N4—H4B⋯O4iv0.861.932.764 (3)162

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  3 in total

1.  Interwoven metal-organic framework on a periodic minimal surface with extra-large pores.

Authors:  B Chen; M Eddaoudi; S T Hyde; M O'Keeffe; O M Yaghi
Journal:  Science       Date:  2001-02-09       Impact factor: 47.728

2.  A metal-organic framework with the zeolite MTN topology containing large cages of volume 2.5 nm3.

Authors:  Qianrong Fang; Guangshan Zhu; Ming Xue; Jinyu Sun; Yen Wei; Shilun Qiu; Ruren Xu
Journal:  Angew Chem Int Ed Engl       Date:  2005-06-20       Impact factor: 15.336

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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