| Literature DB >> 21579314 |
Li-Juan Qiu1, Jun Luo, Xin-Rong Zhang, Bao-Shu Liu.
Abstract
In the title compound, [Co(C(4)N(3))(2)(C(10)H(8)N(2)O(2))]·2H(2)O, a novel tricyano-methanide complex, the Co(II) atom is located on an inversion center and has a distorted octa-hedral coordination with two 2,2'-bipyridyl dioxide (dpdo) mol-ecules and two trans tricyano-methanide (tcm) anions. The equatorial plane is formed by the four O atoms of the two chelating dpdo ligands, with one N atom of each of the two tcm ligands occupying an apical position. There is a disordered solvent water mol-ecule in the asymmetric unit (occupancy ratio 0.63:0.37). These water mol-ecules result in the formation of O-H⋯O and O-H⋯N hydrogen bonds, building a layer parallel to (100). The layers are linked by C-H⋯N hydrogen-bonding inter-actions, leading to a three-dimensional network.Entities:
Year: 2010 PMID: 21579314 PMCID: PMC2979455 DOI: 10.1107/S1600536810017435
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Co(C4N3)2(C10H8N2O2)]·2H2O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 887 reflections |
| θ = 2.5–26.6° | |
| µ = 0.63 mm−1 | |
| β = 95.307 (4)° | Block, orange |
| 0.15 × 0.12 × 0.10 mm | |
| Bruker SMART APEX CCD area-detector diffractometer | 3193 independent reflections |
| Radiation source: fine-focus sealed tube | 2511 reflections with |
| graphite | |
| phi and ω scans | θmax = 27.0°, θmin = 2.1° |
| Absorption correction: multi-scan ( | |
| 7102 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3193 reflections | (Δ/σ)max < 0.001 |
| 214 parameters | Δρmax = 0.27 e Å−3 |
| 0 restraints | Δρmin = −0.20 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| Co1 | 0.5000 | 0.5000 | 0.5000 | 0.03207 (11) | |
| O1 | 0.63648 (11) | 0.55420 (6) | 0.37193 (12) | 0.0390 (3) | |
| O2 | 0.60938 (11) | 0.55988 (6) | 0.66433 (12) | 0.0390 (3) | |
| N1 | 0.64813 (13) | 0.63342 (7) | 0.38754 (14) | 0.0361 (3) | |
| N2 | 0.74874 (13) | 0.55615 (7) | 0.67045 (14) | 0.0371 (3) | |
| N3 | 0.36144 (13) | 0.59847 (8) | 0.48907 (16) | 0.0451 (4) | |
| N4 | 0.3061 (2) | 0.85771 (11) | 0.5359 (3) | 0.0933 (7) | |
| N5 | 0.0012 (2) | 0.71277 (15) | 0.2587 (3) | 0.1017 (8) | |
| C1 | 0.57248 (18) | 0.68142 (10) | 0.29627 (19) | 0.0447 (4) | |
| H1 | 0.5131 | 0.6595 | 0.2229 | 0.054* | |
| C2 | 0.5829 (2) | 0.76308 (11) | 0.3113 (2) | 0.0519 (5) | |
| H2 | 0.5295 | 0.7964 | 0.2487 | 0.062* | |
| C3 | 0.6710 (2) | 0.79551 (10) | 0.4175 (2) | 0.0524 (5) | |
| H3 | 0.6780 | 0.8508 | 0.4283 | 0.063* | |
| C4 | 0.74983 (19) | 0.74506 (10) | 0.5088 (2) | 0.0476 (4) | |
| H4 | 0.8123 | 0.7664 | 0.5802 | 0.057* | |
| C5 | 0.73654 (16) | 0.66330 (9) | 0.49468 (18) | 0.0374 (4) | |
| C6 | 0.81807 (16) | 0.60621 (9) | 0.58911 (18) | 0.0394 (4) | |
| C7 | 0.96264 (18) | 0.60478 (12) | 0.6027 (2) | 0.0591 (5) | |
| H7 | 1.0118 | 0.6399 | 0.5493 | 0.071* | |
| C8 | 1.0347 (2) | 0.55240 (13) | 0.6937 (3) | 0.0707 (6) | |
| H8 | 1.1323 | 0.5515 | 0.7019 | 0.085* | |
| C9 | 0.9616 (2) | 0.50173 (12) | 0.7720 (3) | 0.0643 (6) | |
| H9 | 1.0092 | 0.4653 | 0.8333 | 0.077* | |
| C10 | 0.8172 (2) | 0.50427 (9) | 0.7606 (2) | 0.0494 (5) | |
| H10 | 0.7673 | 0.4701 | 0.8153 | 0.059* | |
| C11 | 0.29971 (16) | 0.65579 (10) | 0.45990 (19) | 0.0400 (4) | |
| C12 | 0.22334 (18) | 0.72533 (10) | 0.4249 (2) | 0.0471 (4) | |
| C13 | 0.2679 (2) | 0.79855 (12) | 0.4860 (3) | 0.0598 (5) | |
| C14 | 0.1018 (2) | 0.71979 (11) | 0.3308 (2) | 0.0607 (5) | |
| O3 | 0.6888 (5) | 0.5258 (4) | 0.0838 (8) | 0.0781 (13) | 0.63 |
| H3A | 0.6797 | 0.4749 | 0.0780 | 0.117* | 0.63 |
| H3B | 0.6715 | 0.5385 | 0.1685 | 0.117* | 0.63 |
| O3B | 0.6196 (10) | 0.5240 (9) | 0.0694 (16) | 0.108 (4) | 0.37 |
| H3C | 0.6343 | 0.4776 | 0.0362 | 0.162* | 0.37 |
| H3D | 0.6149 | 0.5187 | 0.1591 | 0.162* | 0.37 |
| Co1 | 0.03347 (17) | 0.02267 (16) | 0.03967 (19) | −0.00084 (11) | 0.00116 (12) | −0.00023 (12) |
| O1 | 0.0486 (6) | 0.0276 (5) | 0.0414 (6) | −0.0048 (5) | 0.0064 (5) | −0.0029 (5) |
| O2 | 0.0377 (6) | 0.0376 (6) | 0.0418 (6) | −0.0045 (5) | 0.0037 (5) | −0.0035 (5) |
| N1 | 0.0404 (7) | 0.0305 (7) | 0.0378 (8) | −0.0036 (5) | 0.0055 (6) | 0.0028 (6) |
| N2 | 0.0399 (7) | 0.0321 (7) | 0.0380 (8) | −0.0036 (6) | −0.0035 (6) | −0.0019 (6) |
| N3 | 0.0413 (8) | 0.0309 (7) | 0.0620 (10) | 0.0021 (6) | −0.0015 (7) | −0.0011 (7) |
| N4 | 0.1096 (17) | 0.0452 (11) | 0.1228 (19) | 0.0050 (10) | −0.0019 (14) | −0.0175 (12) |
| N5 | 0.0858 (15) | 0.0982 (16) | 0.1116 (19) | 0.0178 (12) | −0.0413 (15) | 0.0107 (13) |
| C1 | 0.0485 (10) | 0.0441 (10) | 0.0410 (10) | −0.0025 (7) | 0.0006 (8) | 0.0083 (8) |
| C2 | 0.0592 (11) | 0.0422 (10) | 0.0548 (12) | 0.0059 (8) | 0.0086 (9) | 0.0175 (9) |
| C3 | 0.0689 (12) | 0.0290 (9) | 0.0611 (13) | −0.0025 (8) | 0.0147 (10) | 0.0080 (8) |
| C4 | 0.0546 (11) | 0.0361 (9) | 0.0522 (11) | −0.0107 (8) | 0.0053 (8) | −0.0011 (8) |
| C5 | 0.0375 (8) | 0.0324 (8) | 0.0421 (9) | −0.0057 (6) | 0.0030 (7) | 0.0019 (7) |
| C6 | 0.0389 (9) | 0.0327 (8) | 0.0457 (10) | −0.0061 (6) | −0.0015 (7) | 0.0003 (7) |
| C7 | 0.0401 (10) | 0.0592 (12) | 0.0771 (15) | −0.0072 (9) | 0.0000 (9) | 0.0098 (11) |
| C8 | 0.0439 (11) | 0.0753 (15) | 0.0897 (17) | 0.0017 (10) | −0.0113 (11) | 0.0099 (13) |
| C9 | 0.0636 (14) | 0.0550 (12) | 0.0692 (15) | 0.0087 (10) | −0.0214 (11) | 0.0057 (10) |
| C10 | 0.0594 (11) | 0.0387 (10) | 0.0475 (11) | −0.0013 (8) | −0.0091 (9) | 0.0075 (8) |
| C11 | 0.0370 (9) | 0.0349 (9) | 0.0481 (10) | −0.0006 (7) | 0.0030 (7) | −0.0011 (7) |
| C12 | 0.0464 (10) | 0.0353 (9) | 0.0590 (12) | 0.0099 (7) | 0.0019 (9) | 0.0029 (8) |
| C13 | 0.0659 (13) | 0.0389 (11) | 0.0748 (15) | 0.0136 (9) | 0.0073 (11) | −0.0003 (10) |
| C14 | 0.0626 (13) | 0.0488 (11) | 0.0688 (14) | 0.0153 (9) | −0.0046 (11) | 0.0099 (10) |
| O3 | 0.118 (4) | 0.0587 (17) | 0.058 (2) | 0.012 (3) | 0.015 (3) | −0.0030 (15) |
| O3B | 0.164 (11) | 0.086 (4) | 0.075 (5) | 0.034 (8) | 0.018 (8) | −0.002 (4) |
| Co1—O2 | 2.0503 (11) | C4—H4 | 0.9300 |
| Co1—O2i | 2.0503 (11) | C5—C6 | 1.478 (2) |
| Co1—O1 | 2.0691 (11) | C6—C7 | 1.378 (2) |
| Co1—O1i | 2.0691 (11) | C7—C8 | 1.367 (3) |
| Co1—N3i | 2.1093 (14) | C7—H7 | 0.9300 |
| Co1—N3 | 2.1093 (14) | C8—C9 | 1.359 (3) |
| O1—N1 | 1.3346 (16) | C8—H8 | 0.9300 |
| O2—N2 | 1.3318 (16) | C9—C10 | 1.378 (3) |
| N1—C1 | 1.340 (2) | C9—H9 | 0.9300 |
| N1—C5 | 1.353 (2) | C10—H10 | 0.9300 |
| N2—C10 | 1.342 (2) | C11—C12 | 1.396 (2) |
| N2—C6 | 1.350 (2) | C12—C14 | 1.400 (3) |
| N3—C11 | 1.145 (2) | C12—C13 | 1.401 (3) |
| N4—C13 | 1.140 (3) | O3—H3A | 0.8567 |
| N5—C14 | 1.134 (3) | O3—H3B | 0.8584 |
| C1—C2 | 1.374 (3) | O3—H3C | 1.0384 |
| C1—H1 | 0.9300 | O3—H3D | 1.0555 |
| C2—C3 | 1.362 (3) | O3B—H3A | 1.0017 |
| C2—H2 | 0.9300 | O3B—H3B | 1.0464 |
| C3—C4 | 1.379 (3) | O3B—H3C | 0.8522 |
| C3—H3 | 0.9300 | O3B—H3D | 0.8564 |
| C4—C5 | 1.376 (2) | ||
| O2—Co1—O2i | 180.00 (5) | N1—C5—C4 | 118.94 (15) |
| O2—Co1—O1 | 85.58 (5) | N1—C5—C6 | 118.18 (13) |
| O2i—Co1—O1 | 94.42 (5) | C4—C5—C6 | 122.86 (15) |
| O2—Co1—O1i | 94.42 (5) | N2—C6—C7 | 118.58 (16) |
| O2i—Co1—O1i | 85.58 (5) | N2—C6—C5 | 118.84 (14) |
| O1—Co1—O1i | 180.00 (5) | C7—C6—C5 | 122.49 (15) |
| O2—Co1—N3i | 93.91 (5) | C8—C7—C6 | 120.92 (19) |
| O2i—Co1—N3i | 86.09 (5) | C8—C7—H7 | 119.5 |
| O1—Co1—N3i | 86.63 (5) | C6—C7—H7 | 119.5 |
| O1i—Co1—N3i | 93.37 (5) | C9—C8—C7 | 118.97 (19) |
| O2—Co1—N3 | 86.09 (5) | C9—C8—H8 | 120.5 |
| O2i—Co1—N3 | 93.91 (5) | C7—C8—H8 | 120.5 |
| O1—Co1—N3 | 93.37 (5) | C8—C9—C10 | 120.15 (18) |
| O1i—Co1—N3 | 86.63 (5) | C8—C9—H9 | 119.9 |
| N3i—Co1—N3 | 180.0 | C10—C9—H9 | 119.9 |
| N1—O1—Co1 | 114.83 (9) | N2—C10—C9 | 119.79 (17) |
| N2—O2—Co1 | 116.72 (9) | N2—C10—H10 | 120.1 |
| O1—N1—C1 | 119.17 (13) | C9—C10—H10 | 120.1 |
| O1—N1—C5 | 119.23 (12) | N3—C11—C12 | 179.43 (19) |
| C1—N1—C5 | 121.60 (14) | C11—C12—C14 | 118.80 (16) |
| O2—N2—C10 | 119.10 (14) | C11—C12—C13 | 119.73 (16) |
| O2—N2—C6 | 119.31 (12) | C14—C12—C13 | 121.46 (15) |
| C10—N2—C6 | 121.56 (15) | N4—C13—C12 | 179.0 (2) |
| C11—N3—Co1 | 166.34 (15) | N5—C14—C12 | 176.8 (3) |
| N1—C1—C2 | 119.85 (16) | H3A—O3—H3B | 106.1 |
| N1—C1—H1 | 120.1 | H3A—O3—H3C | 32.7 |
| C2—C1—H1 | 120.1 | H3B—O3—H3C | 117.5 |
| C3—C2—C1 | 120.34 (16) | H3A—O3—H3D | 82.0 |
| C3—C2—H2 | 119.8 | H3B—O3—H3D | 36.9 |
| C1—C2—H2 | 119.8 | H3C—O3—H3D | 82.1 |
| C2—C3—C4 | 118.89 (17) | H3A—O3B—H3B | 84.0 |
| C2—C3—H3 | 120.6 | H3A—O3B—H3C | 34.1 |
| C4—C3—H3 | 120.6 | H3B—O3B—H3C | 117.3 |
| C5—C4—C3 | 120.36 (17) | H3A—O3B—H3D | 85.3 |
| C5—C4—H4 | 119.8 | H3B—O3B—H3D | 37.3 |
| C3—C4—H4 | 119.8 | H3C—O3B—H3D | 107.2 |
| H··· | ||||
| O3—H3B···O1 | 0.86 | 2.00 | 2.851 (8) | 173 |
| O3B—H3D···O1 | 0.86 | 2.09 | 2.890 (15) | 156 |
| O3—H3A···N4ii | 0.86 | 2.24 | 3.028 (8) | 152 |
| O3B—H3C···N4ii | 0.85 | 2.21 | 3.056 (15) | 174 |
| C1—H1···N4iii | 0.93 | 2.55 | 3.437 (3) | 161 |
| C4—H4···N5iv | 0.93 | 2.38 | 3.287 (3) | 165 |
| C10—H10···N4v | 0.93 | 2.48 | 3.390 (3) | 164 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O3—H3 | 0.86 | 2.00 | 2.851 (8) | 173 |
| O3 | 0.86 | 2.09 | 2.890 (15) | 156 |
| O3—H3 | 0.86 | 2.24 | 3.028 (8) | 152 |
| O3 | 0.85 | 2.21 | 3.056 (15) | 174 |
| C1—H1⋯N4ii | 0.93 | 2.55 | 3.437 (3) | 161 |
| C4—H4⋯N5iii | 0.93 | 2.38 | 3.287 (3) | 165 |
| C10—H10⋯N4iv | 0.93 | 2.48 | 3.390 (3) | 164 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .