Literature DB >> 21579302

Hexaaqua-magnesium(II) bis-{[2-(1-phenyl-1H-tetra-zol-5-yl)sulfan-yl]acetate}.

Chun-Hua Fu1, Xiang Zhou, Qing Yu, He-Dong Bian.   

Abstract

The asymmetric unit of the title compound, [Mg(H(2)O)(6)](C(9)H(7)N(4)O(2)S)(2), contains one-half of a [Mg(H(2)O)(6)](2+) cation ( symmetry) and one uncoordinated 2-[(1-phenyl-1H-tetra-zol-5-yl)sulfan-yl]acetate anion. The Mg(II) cation is coordinated by six water mol-ecules, exhibiting a slightly distorted octa-hedral coordination. A two-dimensional network parallel to (001) is formed via extensive hydrogen-bonding inter-actions involving the water mol-ecules as donors and the tetra-zole N and carboxyl-ate O atoms of the anion as acceptors. The shortest distance between two adjacent parallel benzene rings is 3.315 (2) Å. The dihedral angle between the benzene ring and the tetra-zole ring is 40.98 (2)°.

Entities:  

Year:  2010        PMID: 21579302      PMCID: PMC2979576          DOI: 10.1107/S1600536810016983

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: He et al. (2005 ▶); Yang et al. (2008 ▶). For synthetic details, see: D’Amico et al. (1957 ▶). For related structures with [Mg(H2O)6]2+ cations, see: Zhang et al. (2006 ▶); Zhou et al. (2008 ▶).

Experimental

Crystal data

[Mg(H2O)6](C9H7N4O2S)2 M = 602.92 Triclinic, a = 6.8380 (14) Å b = 7.5220 (15) Å c = 13.556 (3) Å α = 92.57 (3)° β = 99.14 (3)° γ = 100.07 (3)° V = 675.9 (2) Å3 Z = 1 Mo Kα radiation μ = 0.29 mm−1 T = 293 K 0.25 × 0.13 × 0.08 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.806, T max = 0.931 3914 measured reflections 2347 independent reflections 1867 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.047 wR(F 2) = 0.122 S = 1.02 2347 reflections 202 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.25 e Å−3 Δρmin = −0.30 e Å−3 Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810016983/wm2320sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810016983/wm2320Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Mg(H2O)6](C9H7N4O2S)2Z = 1
Mr = 602.92F(000) = 314.0
Triclinic, P1Dx = 1.481 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 6.8380 (14) ÅCell parameters from 1867 reflections
b = 7.5220 (15) Åθ = 2.0–25.0°
c = 13.556 (3) ŵ = 0.29 mm1
α = 92.57 (3)°T = 293 K
β = 99.14 (3)°Prism, colourless
γ = 100.07 (3)°0.25 × 0.13 × 0.08 mm
V = 675.9 (2) Å3
Bruker SMART CCD area-detector diffractometer2347 independent reflections
Radiation source: fine-focus sealed tube1867 reflections with I > 2σ(I)
graphiteRint = 0.026
phi and ω scansθmax = 25.0°, θmin = 3.1°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −8→7
Tmin = 0.806, Tmax = 0.931k = −8→8
3914 measured reflectionsl = −16→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.047Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.122H atoms treated by a mixture of independent and constrained refinement
S = 1.02w = 1/[σ2(Fo2) + (0.067P)2 + 0.250P] where P = (Fo2 + 2Fc2)/3
2347 reflections(Δ/σ)max < 0.001
202 parametersΔρmax = 0.25 e Å3
0 restraintsΔρmin = −0.30 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/Ueq
Mg11.00000.00001.00000.0290 (3)
C10.5668 (4)0.3487 (4)0.8626 (2)0.0316 (6)
C20.4066 (4)0.4641 (4)0.8376 (2)0.0334 (7)
H2A0.46550.57920.81550.040*
H2B0.34720.48740.89620.040*
C30.0428 (4)0.4804 (4)0.72657 (19)0.0292 (6)
C4−0.1942 (4)0.3060 (4)0.5768 (2)0.0321 (7)
C5−0.1784 (4)0.1299 (4)0.5934 (2)0.0393 (7)
H5−0.13090.09850.65720.047*
C6−0.2343 (4)0.0001 (4)0.5137 (3)0.0491 (9)
H6A−0.2206−0.11910.52320.059*
C7−0.3105 (5)0.0470 (5)0.4198 (2)0.0503 (9)
H7A−0.3477−0.04070.36640.060*
C8−0.3314 (5)0.2215 (5)0.4051 (2)0.0526 (9)
H8A−0.38610.25110.34200.063*
C9−0.2721 (5)0.3546 (4)0.4831 (2)0.0431 (8)
H9A−0.28420.47400.47300.052*
N1−0.1273 (3)0.4464 (3)0.65654 (16)0.0326 (6)
N2−0.2303 (4)0.5835 (4)0.66553 (19)0.0449 (7)
N3−0.1245 (4)0.6943 (4)0.73682 (19)0.0465 (7)
N40.0470 (4)0.6354 (3)0.77710 (17)0.0364 (6)
O10.5227 (3)0.1854 (3)0.83268 (16)0.0427 (6)
O20.7301 (3)0.4261 (3)0.91271 (18)0.0550 (7)
O31.0502 (3)0.2699 (3)0.97908 (17)0.0371 (5)
O41.2154 (4)−0.0513 (3)0.91404 (18)0.0453 (6)
O50.7751 (3)−0.0466 (3)0.87611 (17)0.0465 (6)
S10.21753 (11)0.33953 (10)0.73900 (5)0.0384 (2)
H5B0.700 (5)0.027 (5)0.857 (2)0.050 (10)*
H3B1.122 (5)0.338 (5)1.016 (3)0.048 (11)*
H5A0.793 (6)−0.110 (5)0.827 (3)0.069 (12)*
H4B1.194 (6)−0.160 (6)0.877 (3)0.088 (14)*
H4A1.291 (6)0.020 (5)0.893 (3)0.058 (13)*
H3A0.935 (8)0.313 (7)0.944 (4)0.13 (2)*
U11U22U33U12U13U23
Mg10.0306 (7)0.0222 (6)0.0334 (7)0.0083 (5)0.0007 (5)−0.0019 (5)
C10.0297 (15)0.0306 (15)0.0319 (14)0.0047 (12)−0.0013 (12)0.0008 (12)
C20.0324 (16)0.0308 (14)0.0343 (15)0.0082 (12)−0.0033 (12)−0.0029 (12)
C30.0292 (15)0.0322 (15)0.0266 (13)0.0097 (12)0.0018 (11)−0.0003 (12)
C40.0255 (15)0.0358 (16)0.0339 (15)0.0065 (12)0.0024 (11)−0.0041 (12)
C50.0311 (16)0.0384 (17)0.0465 (17)0.0091 (13)−0.0016 (13)0.0013 (14)
C60.0349 (18)0.0360 (17)0.073 (2)0.0084 (14)0.0021 (16)−0.0108 (16)
C70.0375 (18)0.057 (2)0.053 (2)0.0069 (15)0.0059 (15)−0.0239 (17)
C80.051 (2)0.069 (2)0.0327 (16)0.0058 (17)−0.0001 (14)−0.0053 (16)
C90.0505 (19)0.0411 (17)0.0350 (16)0.0109 (14)−0.0037 (14)0.0036 (14)
N10.0326 (13)0.0342 (13)0.0319 (12)0.0148 (10)−0.0002 (10)−0.0021 (10)
N20.0429 (15)0.0470 (15)0.0463 (15)0.0262 (12)−0.0046 (12)−0.0083 (13)
N30.0496 (16)0.0457 (16)0.0458 (15)0.0250 (13)−0.0013 (12)−0.0113 (13)
N40.0380 (14)0.0347 (13)0.0375 (13)0.0167 (11)0.0007 (11)−0.0051 (11)
O10.0356 (12)0.0297 (11)0.0581 (13)0.0117 (9)−0.0097 (10)−0.0065 (10)
O20.0371 (13)0.0327 (12)0.0827 (17)0.0054 (9)−0.0239 (12)−0.0032 (11)
O30.0390 (13)0.0231 (10)0.0454 (12)0.0059 (9)−0.0035 (10)−0.0018 (10)
O40.0471 (15)0.0331 (12)0.0552 (14)−0.0001 (11)0.0188 (12)−0.0099 (11)
O50.0509 (14)0.0469 (14)0.0413 (13)0.0279 (11)−0.0094 (10)−0.0129 (11)
S10.0359 (4)0.0357 (4)0.0410 (4)0.0180 (3)−0.0097 (3)−0.0103 (3)
Mg1—O3i2.039 (2)C5—C61.383 (4)
Mg1—O32.039 (2)C5—H50.9300
Mg1—O5i2.061 (2)C6—C71.382 (5)
Mg1—O52.061 (2)C6—H6A0.9300
Mg1—O42.093 (2)C7—C81.365 (5)
Mg1—O4i2.093 (2)C7—H7A0.9300
C1—O21.242 (3)C8—C91.383 (4)
C1—O11.246 (3)C8—H8A0.9300
C1—C21.519 (4)C9—H9A0.9300
C2—S11.803 (3)N1—N21.358 (3)
C2—H2A0.9700N2—N31.284 (3)
C2—H2B0.9700N3—N41.367 (3)
C3—N41.319 (3)O3—H3B0.75 (4)
C3—N11.358 (3)O3—H3A0.97 (6)
C3—S11.725 (3)O4—H4B0.91 (5)
C4—C51.373 (4)O4—H4A0.77 (4)
C4—C91.388 (4)O5—H5B0.84 (4)
C4—N11.438 (3)O5—H5A0.84 (4)
O3i—Mg1—O3180.000 (1)C4—C5—H5120.6
O3i—Mg1—O5i90.36 (10)C6—C5—H5120.6
O3—Mg1—O5i89.64 (10)C7—C6—C5120.1 (3)
O3i—Mg1—O589.64 (10)C7—C6—H6A119.9
O3—Mg1—O590.36 (10)C5—C6—H6A119.9
O5i—Mg1—O5180.000 (1)C8—C7—C6120.4 (3)
O3i—Mg1—O487.11 (10)C8—C7—H7A119.8
O3—Mg1—O492.89 (10)C6—C7—H7A119.8
O5i—Mg1—O488.33 (10)C7—C8—C9120.6 (3)
O5—Mg1—O491.67 (10)C7—C8—H8A119.7
O3i—Mg1—O4i92.89 (10)C9—C8—H8A119.7
O3—Mg1—O4i87.11 (10)C8—C9—C4118.5 (3)
O5i—Mg1—O4i91.67 (10)C8—C9—H9A120.8
O5—Mg1—O4i88.33 (10)C4—C9—H9A120.8
O4—Mg1—O4i180.000 (1)N2—N1—C3108.3 (2)
O2—C1—O1125.7 (3)N2—N1—C4120.9 (2)
O2—C1—C2116.6 (2)C3—N1—C4130.5 (2)
O1—C1—C2117.6 (2)N3—N2—N1106.2 (2)
C1—C2—S1107.16 (18)N2—N3—N4111.7 (2)
C1—C2—H2A110.3C3—N4—N3105.8 (2)
S1—C2—H2A110.3Mg1—O3—H3B123 (3)
C1—C2—H2B110.3Mg1—O3—H3A115 (3)
S1—C2—H2B110.3H3B—O3—H3A115 (4)
H2A—C2—H2B108.5Mg1—O4—H4B119 (3)
N4—C3—N1108.1 (2)Mg1—O4—H4A127 (3)
N4—C3—S1129.0 (2)H4B—O4—H4A111 (4)
N1—C3—S1122.93 (19)Mg1—O5—H5B125 (2)
C5—C4—C9121.5 (3)Mg1—O5—H5A118 (3)
C5—C4—N1120.5 (2)H5B—O5—H5A110 (3)
C9—C4—N1118.0 (3)C3—S1—C2100.91 (12)
C4—C5—C6118.9 (3)
O2—C1—C2—S1164.8 (2)C5—C4—N1—N2−142.3 (3)
O1—C1—C2—S1−16.2 (3)C9—C4—N1—N238.4 (4)
C9—C4—C5—C62.6 (4)C5—C4—N1—C344.2 (4)
N1—C4—C5—C6−176.6 (3)C9—C4—N1—C3−135.0 (3)
C4—C5—C6—C7−2.0 (5)C3—N1—N2—N30.7 (3)
C5—C6—C7—C8−0.1 (5)C4—N1—N2—N3−174.0 (3)
C6—C7—C8—C91.6 (5)N1—N2—N3—N4−0.5 (4)
C7—C8—C9—C4−1.0 (5)N1—C3—N4—N30.3 (3)
C5—C4—C9—C8−1.1 (5)S1—C3—N4—N3178.7 (2)
N1—C4—C9—C8178.1 (3)N2—N3—N4—C30.1 (4)
N4—C3—N1—N2−0.7 (3)N4—C3—S1—C2−0.9 (3)
S1—C3—N1—N2−179.1 (2)N1—C3—S1—C2177.1 (2)
N4—C3—N1—C4173.4 (3)C1—C2—S1—C3176.0 (2)
S1—C3—N1—C4−5.0 (4)
D—H···AD—HH···AD···AD—H···A
O3—H3A···O20.97 (5)1.77 (6)2.711 (3)164 (5)
O3—H3B···O2ii0.75 (4)2.00 (4)2.727 (3)162 (4)
O4—H4A···O1iii0.77 (4)2.13 (4)2.899 (3)172 (4)
O4—H4B···N4iv0.92 (4)2.01 (4)2.882 (3)158 (4)
O5—H5A···N3iv0.84 (4)2.08 (4)2.896 (4)164 (4)
O5—H5B···O10.84 (4)1.85 (4)2.682 (3)172 (3)
Table 1

Selected bond lengths (Å)

Mg1—O32.039 (2)
Mg1—O52.061 (2)
Mg1—O42.093 (2)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3A⋯O20.97 (5)1.77 (6)2.711 (3)164 (5)
O3—H3B⋯O2i0.75 (4)2.00 (4)2.727 (3)162 (4)
O4—H4A⋯O1ii0.77 (4)2.13 (4)2.899 (3)172 (4)
O4—H4B⋯N4iii0.92 (4)2.01 (4)2.882 (3)158 (4)
O5—H5A⋯N3iii0.84 (4)2.08 (4)2.896 (4)164 (4)
O5—H5B⋯O10.84 (4)1.85 (4)2.682 (3)172 (3)

Symmetry codes: (i) ; (ii) ; (iii) .

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