| Literature DB >> 21579290 |
Pei-Xi Lin, Yan Cheng, Yu-Lian Mai, Zhe An.
Abstract
In the centrosymmetric dinuclear mol-ecule of the title compound, [Cd(2)(C(14)H(8)O(4))(2)(C(10)H(8)N(2))(2)(H(2)O)(2)], the Cd(2+) ion is coordinated by three O atoms from two different diphenyl-dicarboxyl-ate (dpa) ligands (one O,O'-bidentate and one monodentate), a chelating bipyridine ligand and a water mol-ecule, generating an extremely distorted trigonal-prismatic (or irregular) CdN(2)O(4) coordination geometry for the metal ion. The bridging ligands generate an 18-membered ring, which is stabilized by two pairs of intra-molecular O-H⋯O hydrogen bonds.Entities:
Year: 2010 PMID: 21579290 PMCID: PMC2979598 DOI: 10.1107/S1600536810016387
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Cd2(C14H8O4)2(C10H8N2)2(H2O)2] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 3697 reflections |
| θ = 3.1–25.0° | |
| µ = 1.07 mm−1 | |
| β = 98.37 (3)° | Block, colorless |
| 0.12 × 0.10 × 0.08 mm | |
| Bruker APEXII CCD diffractometer | 3697 independent reflections |
| Radiation source: fine-focus sealed tube | 3223 reflections with |
| graphite | |
| phi and ω scans | θmax = 25.0°, θmin = 3.1° |
| Absorption correction: multi-scan ( | |
| 15936 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3697 reflections | (Δ/σ)max = 0.003 |
| 295 parameters | Δρmax = 0.59 e Å−3 |
| 0 restraints | Δρmin = −0.26 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.7107 (2) | 0.6689 (2) | −0.01343 (15) | 0.0395 (6) | |
| C2 | 0.8213 (2) | 0.6527 (2) | −0.04980 (14) | 0.0346 (5) | |
| C3 | 0.9266 (2) | 0.6536 (2) | 0.00182 (15) | 0.0432 (6) | |
| H3 | 0.9251 | 0.6607 | 0.0565 | 0.052* | |
| C4 | 1.0330 (2) | 0.6445 (3) | −0.02535 (17) | 0.0531 (7) | |
| H4 | 1.1025 | 0.6464 | 0.0103 | 0.064* | |
| C5 | 1.0349 (2) | 0.6323 (3) | −0.10596 (18) | 0.0616 (8) | |
| H5 | 1.1062 | 0.6257 | −0.1253 | 0.074* | |
| C6 | 0.9320 (2) | 0.6300 (3) | −0.15806 (16) | 0.0534 (7) | |
| H6 | 0.9351 | 0.6218 | −0.2125 | 0.064* | |
| C7 | 0.8229 (2) | 0.6394 (2) | −0.13230 (14) | 0.0375 (5) | |
| C8 | 0.6572 (3) | 0.8714 (3) | 0.17640 (18) | 0.0637 (8) | |
| H8 | 0.7079 | 0.8055 | 0.1759 | 0.076* | |
| C9 | 0.6904 (3) | 0.9662 (4) | 0.22807 (19) | 0.0726 (10) | |
| H9 | 0.7603 | 0.9631 | 0.2633 | 0.087* | |
| C10 | 0.6179 (3) | 1.0650 (3) | 0.2263 (2) | 0.0730 (9) | |
| H10 | 0.6388 | 1.1311 | 0.2599 | 0.088* | |
| C11 | 0.5144 (3) | 1.0669 (3) | 0.17499 (19) | 0.0603 (8) | |
| H11 | 0.4654 | 1.1346 | 0.1724 | 0.072* | |
| C12 | 0.4840 (2) | 0.9658 (2) | 0.12683 (15) | 0.0434 (6) | |
| C13 | 0.3711 (2) | 0.9582 (2) | 0.07259 (16) | 0.0415 (6) | |
| C14 | 0.2774 (3) | 1.0359 (2) | 0.0786 (2) | 0.0586 (8) | |
| H14 | 0.2833 | 1.0947 | 0.1187 | 0.070* | |
| C15 | 0.1764 (3) | 1.0254 (3) | 0.0250 (2) | 0.0705 (9) | |
| H15 | 0.1133 | 1.0771 | 0.0284 | 0.085* | |
| C16 | 0.1693 (3) | 0.9385 (3) | −0.0332 (2) | 0.0696 (9) | |
| H16 | 0.1022 | 0.9311 | −0.0708 | 0.084* | |
| C17 | 0.2630 (3) | 0.8622 (3) | −0.03524 (19) | 0.0573 (7) | |
| H17 | 0.2575 | 0.8022 | −0.0745 | 0.069* | |
| C18 | 0.3844 (2) | 0.5407 (2) | 0.13566 (14) | 0.0378 (5) | |
| C19 | 0.3754 (2) | 0.4450 (2) | 0.19899 (14) | 0.0373 (5) | |
| C20 | 0.4655 (2) | 0.4387 (3) | 0.26274 (15) | 0.0495 (7) | |
| H20 | 0.5271 | 0.4940 | 0.2653 | 0.059* | |
| C21 | 0.4666 (3) | 0.3531 (3) | 0.32235 (17) | 0.0628 (8) | |
| H21 | 0.5282 | 0.3508 | 0.3645 | 0.075* | |
| C22 | 0.3765 (3) | 0.2714 (3) | 0.31919 (18) | 0.0635 (9) | |
| H22 | 0.3767 | 0.2127 | 0.3589 | 0.076* | |
| C23 | 0.2850 (3) | 0.2767 (3) | 0.25660 (17) | 0.0519 (7) | |
| H23 | 0.2236 | 0.2213 | 0.2552 | 0.062* | |
| C24 | 0.2821 (2) | 0.3629 (2) | 0.19543 (14) | 0.0383 (5) | |
| Cd1 | 0.495536 (15) | 0.710476 (16) | 0.035750 (10) | 0.03941 (8) | |
| N1 | 0.5558 (2) | 0.8693 (2) | 0.12699 (13) | 0.0474 (5) | |
| N2 | 0.36180 (19) | 0.87021 (19) | 0.01676 (13) | 0.0437 (5) | |
| O1 | 0.62029 (16) | 0.71087 (16) | −0.05533 (11) | 0.0462 (4) | |
| O2 | 0.71202 (18) | 0.6405 (2) | 0.05848 (11) | 0.0609 (5) | |
| O3 | 0.29828 (17) | 0.58894 (17) | 0.09796 (11) | 0.0519 (5) | |
| O4 | 0.49025 (16) | 0.56627 (16) | 0.12540 (11) | 0.0494 (4) | |
| O5 | 0.37320 (18) | 0.60995 (18) | −0.07047 (13) | 0.0514 (5) | |
| H1W | 0.417 (3) | 0.566 (3) | −0.091 (2) | 0.080* | |
| H2W | 0.330 (3) | 0.563 (3) | −0.053 (2) | 0.080* |
| C1 | 0.0421 (15) | 0.0358 (12) | 0.0425 (15) | −0.0027 (11) | 0.0129 (12) | −0.0079 (11) |
| C2 | 0.0344 (13) | 0.0329 (12) | 0.0377 (13) | −0.0020 (10) | 0.0088 (10) | −0.0028 (10) |
| C3 | 0.0428 (15) | 0.0466 (14) | 0.0400 (14) | −0.0024 (12) | 0.0056 (11) | −0.0080 (12) |
| C4 | 0.0339 (15) | 0.0671 (19) | 0.0553 (17) | −0.0017 (13) | −0.0031 (12) | −0.0098 (15) |
| C5 | 0.0313 (15) | 0.094 (2) | 0.0616 (18) | −0.0063 (15) | 0.0133 (13) | −0.0190 (18) |
| C6 | 0.0382 (15) | 0.082 (2) | 0.0422 (14) | −0.0055 (14) | 0.0144 (12) | −0.0101 (15) |
| C7 | 0.0350 (13) | 0.0397 (13) | 0.0385 (13) | −0.0046 (11) | 0.0084 (10) | −0.0027 (11) |
| C8 | 0.0521 (19) | 0.078 (2) | 0.0586 (18) | 0.0112 (16) | −0.0011 (15) | −0.0007 (17) |
| C9 | 0.056 (2) | 0.102 (3) | 0.0561 (19) | −0.014 (2) | −0.0035 (15) | −0.0080 (19) |
| C10 | 0.076 (2) | 0.073 (2) | 0.070 (2) | −0.016 (2) | 0.0110 (19) | −0.0173 (18) |
| C11 | 0.063 (2) | 0.0493 (16) | 0.070 (2) | −0.0067 (14) | 0.0148 (16) | −0.0082 (15) |
| C12 | 0.0482 (16) | 0.0409 (14) | 0.0443 (14) | −0.0029 (12) | 0.0174 (12) | 0.0052 (12) |
| C13 | 0.0433 (15) | 0.0298 (12) | 0.0543 (15) | 0.0016 (11) | 0.0168 (12) | 0.0089 (12) |
| C14 | 0.056 (2) | 0.0354 (14) | 0.087 (2) | 0.0062 (13) | 0.0204 (17) | −0.0016 (14) |
| C15 | 0.0437 (19) | 0.0454 (17) | 0.122 (3) | 0.0111 (14) | 0.0120 (18) | 0.0057 (19) |
| C16 | 0.0488 (19) | 0.0480 (17) | 0.106 (3) | 0.0099 (14) | −0.0086 (17) | 0.0095 (18) |
| C17 | 0.0501 (18) | 0.0490 (16) | 0.0695 (19) | 0.0062 (14) | −0.0026 (15) | 0.0035 (15) |
| C18 | 0.0421 (15) | 0.0355 (12) | 0.0373 (13) | −0.0017 (11) | 0.0103 (11) | −0.0066 (11) |
| C19 | 0.0373 (14) | 0.0421 (13) | 0.0329 (12) | −0.0012 (11) | 0.0066 (10) | −0.0024 (11) |
| C20 | 0.0454 (16) | 0.0560 (16) | 0.0446 (15) | −0.0121 (13) | −0.0019 (12) | 0.0008 (13) |
| C21 | 0.064 (2) | 0.072 (2) | 0.0460 (16) | −0.0134 (17) | −0.0120 (14) | 0.0123 (16) |
| C22 | 0.075 (2) | 0.070 (2) | 0.0425 (16) | −0.0123 (17) | −0.0016 (15) | 0.0205 (15) |
| C23 | 0.0537 (18) | 0.0588 (17) | 0.0431 (15) | −0.0147 (14) | 0.0068 (13) | 0.0064 (13) |
| C24 | 0.0354 (13) | 0.0469 (14) | 0.0339 (12) | −0.0030 (11) | 0.0093 (10) | −0.0009 (11) |
| Cd1 | 0.03751 (12) | 0.04095 (12) | 0.04107 (12) | 0.00950 (8) | 0.01014 (8) | 0.00319 (8) |
| N1 | 0.0439 (13) | 0.0520 (13) | 0.0469 (12) | 0.0065 (11) | 0.0083 (10) | 0.0021 (11) |
| N2 | 0.0412 (12) | 0.0378 (11) | 0.0520 (13) | 0.0066 (9) | 0.0073 (10) | 0.0055 (10) |
| O1 | 0.0362 (10) | 0.0566 (11) | 0.0475 (10) | 0.0040 (8) | 0.0119 (8) | −0.0030 (9) |
| O2 | 0.0582 (13) | 0.0849 (15) | 0.0443 (11) | 0.0056 (11) | 0.0225 (9) | 0.0077 (11) |
| O3 | 0.0480 (12) | 0.0506 (11) | 0.0569 (11) | 0.0086 (9) | 0.0069 (9) | 0.0115 (9) |
| O4 | 0.0416 (11) | 0.0511 (10) | 0.0575 (11) | −0.0050 (9) | 0.0132 (9) | 0.0107 (9) |
| O5 | 0.0435 (12) | 0.0496 (12) | 0.0609 (13) | −0.0003 (9) | 0.0073 (9) | 0.0015 (10) |
| C1—O2 | 1.252 (3) | C15—C16 | 1.363 (5) |
| C1—O1 | 1.259 (3) | C15—H15 | 0.9300 |
| C1—C2 | 1.505 (3) | C16—C17 | 1.370 (4) |
| C2—C3 | 1.388 (3) | C16—H16 | 0.9300 |
| C2—C7 | 1.404 (3) | C17—N2 | 1.337 (4) |
| C3—C4 | 1.375 (3) | C17—H17 | 0.9300 |
| C3—H3 | 0.9300 | C18—O3 | 1.219 (3) |
| C4—C5 | 1.371 (4) | C18—O4 | 1.289 (3) |
| C4—H4 | 0.9300 | C18—C19 | 1.513 (3) |
| C5—C6 | 1.371 (4) | C19—C20 | 1.385 (4) |
| C5—H5 | 0.9300 | C19—C24 | 1.397 (3) |
| C6—C7 | 1.394 (3) | C20—C21 | 1.375 (4) |
| C6—H6 | 0.9300 | C20—H20 | 0.9300 |
| C7—C24i | 1.493 (3) | C21—C22 | 1.367 (4) |
| C8—N1 | 1.334 (4) | C21—H21 | 0.9300 |
| C8—C9 | 1.375 (5) | C22—C23 | 1.382 (4) |
| C8—H8 | 0.9300 | C22—H22 | 0.9300 |
| C9—C10 | 1.366 (5) | C23—C24 | 1.397 (4) |
| C9—H9 | 0.9300 | C23—H23 | 0.9300 |
| C10—C11 | 1.369 (5) | C24—C7i | 1.493 (3) |
| C10—H10 | 0.9300 | Cd1—O4 | 2.1960 (18) |
| C11—C12 | 1.389 (4) | Cd1—O1 | 2.2540 (18) |
| C11—H11 | 0.9300 | Cd1—N2 | 2.324 (2) |
| C12—N1 | 1.343 (3) | Cd1—N1 | 2.362 (2) |
| C12—C13 | 1.481 (4) | Cd1—O5 | 2.385 (2) |
| C13—N2 | 1.342 (3) | Cd1—O2 | 2.586 (2) |
| C13—C14 | 1.391 (4) | O5—H1W | 0.81 (4) |
| C14—C15 | 1.372 (5) | O5—H2W | 0.80 (4) |
| C14—H14 | 0.9300 | ||
| O2—C1—O1 | 121.9 (2) | C16—C17—H17 | 118.5 |
| O2—C1—C2 | 118.4 (2) | O3—C18—O4 | 123.4 (2) |
| O1—C1—C2 | 119.7 (2) | O3—C18—C19 | 122.4 (2) |
| C3—C2—C7 | 119.2 (2) | O4—C18—C19 | 114.2 (2) |
| C3—C2—C1 | 117.3 (2) | C20—C19—C24 | 119.2 (2) |
| C7—C2—C1 | 123.5 (2) | C20—C19—C18 | 117.6 (2) |
| C4—C3—C2 | 122.1 (2) | C24—C19—C18 | 123.2 (2) |
| C4—C3—H3 | 119.0 | C21—C20—C19 | 122.0 (3) |
| C2—C3—H3 | 119.0 | C21—C20—H20 | 119.0 |
| C5—C4—C3 | 118.8 (3) | C19—C20—H20 | 119.0 |
| C5—C4—H4 | 120.6 | C22—C21—C20 | 119.5 (3) |
| C3—C4—H4 | 120.6 | C22—C21—H21 | 120.3 |
| C6—C5—C4 | 120.1 (2) | C20—C21—H21 | 120.3 |
| C6—C5—H5 | 119.9 | C21—C22—C23 | 119.6 (3) |
| C4—C5—H5 | 119.9 | C21—C22—H22 | 120.2 |
| C5—C6—C7 | 122.3 (2) | C23—C22—H22 | 120.2 |
| C5—C6—H6 | 118.8 | C22—C23—C24 | 121.8 (3) |
| C7—C6—H6 | 118.8 | C22—C23—H23 | 119.1 |
| C6—C7—C2 | 117.4 (2) | C24—C23—H23 | 119.1 |
| C6—C7—C24i | 116.8 (2) | C23—C24—C19 | 117.9 (2) |
| C2—C7—C24i | 125.8 (2) | C23—C24—C7i | 116.5 (2) |
| N1—C8—C9 | 123.2 (3) | C19—C24—C7i | 125.5 (2) |
| N1—C8—H8 | 118.4 | O4—Cd1—O1 | 123.82 (7) |
| C9—C8—H8 | 118.4 | O4—Cd1—N2 | 123.57 (7) |
| C10—C9—C8 | 118.2 (3) | O1—Cd1—N2 | 112.39 (7) |
| C10—C9—H9 | 120.9 | O4—Cd1—N1 | 96.65 (8) |
| C8—C9—H9 | 120.9 | O1—Cd1—N1 | 106.70 (7) |
| C9—C10—C11 | 120.0 (3) | N2—Cd1—N1 | 70.19 (8) |
| C9—C10—H10 | 120.0 | O4—Cd1—O5 | 96.51 (7) |
| C11—C10—H10 | 120.0 | O1—Cd1—O5 | 81.60 (7) |
| C10—C11—C12 | 118.7 (3) | N2—Cd1—O5 | 86.34 (8) |
| C10—C11—H11 | 120.6 | N1—Cd1—O5 | 156.53 (7) |
| C12—C11—H11 | 120.6 | O4—Cd1—O2 | 78.88 (7) |
| N1—C12—C11 | 121.6 (3) | O1—Cd1—O2 | 53.40 (6) |
| N1—C12—C13 | 116.3 (2) | N2—Cd1—O2 | 148.28 (7) |
| C11—C12—C13 | 122.1 (3) | N1—Cd1—O2 | 86.32 (8) |
| N2—C13—C14 | 120.5 (3) | O5—Cd1—O2 | 115.29 (7) |
| N2—C13—C12 | 116.7 (2) | C8—N1—C12 | 118.2 (3) |
| C14—C13—C12 | 122.8 (3) | C8—N1—Cd1 | 124.6 (2) |
| C15—C14—C13 | 119.7 (3) | C12—N1—Cd1 | 117.16 (18) |
| C15—C14—H14 | 120.2 | C17—N2—C13 | 118.8 (2) |
| C13—C14—H14 | 120.2 | C17—N2—Cd1 | 121.77 (18) |
| C16—C15—C14 | 119.4 (3) | C13—N2—Cd1 | 117.42 (17) |
| C16—C15—H15 | 120.3 | C1—O1—Cd1 | 100.02 (15) |
| C14—C15—H15 | 120.3 | C1—O2—Cd1 | 84.66 (16) |
| C15—C16—C17 | 118.7 (3) | C18—O4—Cd1 | 111.79 (16) |
| C15—C16—H16 | 120.7 | Cd1—O5—H1W | 105 (3) |
| C17—C16—H16 | 120.7 | Cd1—O5—H2W | 110 (3) |
| N2—C17—C16 | 122.9 (3) | H1W—O5—H2W | 104 (4) |
| N2—C17—H17 | 118.5 |
| H··· | ||||
| O5—H1W···O4i | 0.81 (4) | 1.94 (4) | 2.738 (3) | 168 (4) |
| O5—H2W···O2i | 0.80 (4) | 2.28 (4) | 2.932 (3) | 138 (3) |
Selected bond lengths (Å)
| Cd1—O4 | 2.1960 (18) |
| Cd1—O1 | 2.2540 (18) |
| Cd1—N2 | 2.324 (2) |
| Cd1—N1 | 2.362 (2) |
| Cd1—O5 | 2.385 (2) |
| Cd1—O2 | 2.586 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O5—H1 | 0.81 (4) | 1.94 (4) | 2.738 (3) | 168 (4) |
| O5—H2 | 0.80 (4) | 2.28 (4) | 2.932 (3) | 138 (3) |
Symmetry code: (i) .