Literature DB >> 21579253

[3-(5-Nitro-2-fur-yl)-1-phenyl-1H-pyrazol-4-yl](phen-yl)methanone.

Jia Hao Goh, Hoong-Kun Fun, B Kalluraya, N Satheesh Rai.   

Abstract

In the title pyrazole compound, C(20)H(13)N(3)O(4), an intra-molecular C-H⋯O hydrogen bond generates a seven-membered ring, producing an S(7) ring motif. The essentially planar furan and pyrazole rings [maximum deviations of 0.002 (1) and 0.007 (1) Å, respectively] are coplanar with each other, forming a dihedral angle of 3.06 (10)°. The pyrazole ring forms dihedral angles of 8.51 (9) and 56.81 (9)° with the two benzene rings. The nitro group is coplanar with the attached furan ring, as indicated by the dihedral angle of 2.5 (3)°. In the crystal packing, inter-molecular C-H⋯O hydrogen bonds link adjacent mol-ecules into two-mol-ecule-wide chains along the a axis. The crystal packing is further stabilized by weak inter-molecular C-H⋯π and π-π inter-actions [centroid-centroid distance = 3.4441 (10) Å].

Entities:  

Year:  2010        PMID: 21579253      PMCID: PMC2979013          DOI: 10.1107/S1600536810015199

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to and applications of the title compound, see: Kalluraya et al. (1994 ▶); Rai & Kalluraya (2006 ▶); Rai et al. (2008 ▶); Sridhar & Perumal (2003 ▶). For graph-set descriptions of hydrogen-bond ring motifs, see: Bernstein et al. (1995 ▶). For closely related structures, see: Goh et al. (2009 ▶). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C20H13N3O4 M = 359.33 Monoclinic, a = 11.2946 (12) Å b = 6.9755 (8) Å c = 22.7064 (18) Å β = 115.015 (4)° V = 1621.1 (3) Å3 Z = 4 Mo Kα radiation μ = 0.11 mm−1 T = 100 K 0.24 × 0.15 × 0.07 mm

Data collection

Bruker APEXII DUO CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.976, T max = 0.992 17931 measured reflections 4725 independent reflections 2991 reflections with I > 2σ(I) R int = 0.056

Refinement

R[F 2 > 2σ(F 2)] = 0.051 wR(F 2) = 0.129 S = 1.02 4725 reflections 296 parameters All H-atom parameters refined Δρmax = 0.37 e Å−3 Δρmin = −0.24 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810015199/tk2653sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810015199/tk2653Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H13N3O4F(000) = 744
Mr = 359.33Dx = 1.472 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2349 reflections
a = 11.2946 (12) Åθ = 3.5–26.3°
b = 6.9755 (8) ŵ = 0.11 mm1
c = 22.7064 (18) ÅT = 100 K
β = 115.015 (4)°Block, brown
V = 1621.1 (3) Å30.24 × 0.15 × 0.07 mm
Z = 4
Bruker APEXII DUO CCD area-detector diffractometer4725 independent reflections
Radiation source: fine-focus sealed tube2991 reflections with I > 2σ(I)
graphiteRint = 0.056
φ and ω scansθmax = 30.0°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −15→15
Tmin = 0.976, Tmax = 0.992k = −9→9
17931 measured reflectionsl = −31→31
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.051Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.129All H-atom parameters refined
S = 1.02w = 1/[σ2(Fo2) + (0.0464P)2 + 0.6127P] where P = (Fo2 + 2Fc2)/3
4725 reflections(Δ/σ)max = 0.001
296 parametersΔρmax = 0.37 e Å3
0 restraintsΔρmin = −0.24 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1)K.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O11.26743 (11)0.74226 (19)1.00753 (6)0.0293 (3)
O20.86733 (12)0.95863 (19)0.85528 (6)0.0297 (3)
O31.55123 (13)0.7939 (2)0.98584 (7)0.0411 (4)
O41.52027 (15)0.6888 (3)1.06817 (9)0.0764 (7)
N10.96246 (13)0.6915 (2)1.05307 (6)0.0206 (3)
N21.07625 (13)0.6992 (2)1.04603 (7)0.0215 (3)
N31.48065 (16)0.7520 (3)1.01308 (9)0.0382 (4)
C10.62475 (17)0.6603 (3)0.86532 (8)0.0286 (4)
C20.49042 (19)0.6327 (4)0.83427 (9)0.0359 (5)
C30.40950 (19)0.7816 (4)0.80076 (9)0.0410 (5)
C40.4611 (2)0.9603 (4)0.79806 (10)0.0434 (6)
C50.5954 (2)0.9876 (3)0.82757 (10)0.0362 (5)
C60.67801 (17)0.8374 (3)0.86116 (8)0.0271 (4)
C70.82209 (16)0.8692 (3)0.88763 (8)0.0238 (4)
C80.90414 (16)0.7934 (2)0.95280 (8)0.0213 (3)
C91.04207 (16)0.7631 (2)0.98559 (8)0.0208 (3)
C101.14371 (16)0.7910 (2)0.96325 (8)0.0226 (4)
C111.14713 (18)0.8593 (3)0.90780 (9)0.0278 (4)
C121.27856 (18)0.8549 (3)0.91693 (9)0.0294 (4)
C131.34517 (17)0.7833 (3)0.97709 (9)0.0282 (4)
C140.85851 (16)0.7448 (2)0.99826 (8)0.0216 (3)
C150.96295 (16)0.6275 (2)1.11294 (8)0.0209 (3)
C161.07647 (16)0.5522 (3)1.16079 (8)0.0233 (4)
C171.07388 (18)0.4800 (3)1.21724 (9)0.0281 (4)
C180.96039 (18)0.4857 (3)1.22655 (9)0.0282 (4)
C190.84901 (18)0.5655 (3)1.17896 (9)0.0273 (4)
C200.84850 (17)0.6368 (3)1.12181 (8)0.0238 (4)
H1A0.6830 (18)0.558 (3)0.8899 (9)0.024 (5)*
H2A0.458 (2)0.505 (3)0.8376 (11)0.047 (7)*
H3A0.315 (2)0.757 (3)0.7776 (11)0.047 (6)*
H4A0.406 (2)1.071 (4)0.7748 (12)0.057 (7)*
H5A0.635 (2)1.110 (4)0.8263 (11)0.048 (7)*
H11A1.071 (2)0.900 (4)0.8687 (12)0.061 (7)*
H12A1.319 (2)0.895 (3)0.8890 (10)0.041 (6)*
H14A0.7722 (19)0.741 (3)0.9963 (9)0.028 (5)*
H16A1.1530 (18)0.549 (3)1.1519 (9)0.025 (5)*
H17A1.150 (2)0.425 (3)1.2493 (10)0.039 (6)*
H18A0.9566 (19)0.433 (3)1.2648 (10)0.034 (5)*
H19A0.7709 (17)0.575 (3)1.1840 (8)0.022 (5)*
H20A0.7707 (18)0.686 (3)1.0903 (9)0.022 (5)*
U11U22U33U12U13U23
O10.0199 (6)0.0361 (7)0.0344 (7)0.0003 (5)0.0140 (5)0.0054 (6)
O20.0304 (7)0.0320 (7)0.0293 (6)−0.0019 (6)0.0152 (5)0.0027 (6)
O30.0260 (7)0.0555 (10)0.0492 (8)−0.0051 (7)0.0230 (6)−0.0074 (7)
O40.0283 (8)0.1271 (18)0.0727 (12)0.0171 (10)0.0201 (8)0.0604 (13)
N10.0185 (7)0.0227 (7)0.0226 (7)−0.0021 (6)0.0106 (5)−0.0021 (6)
N20.0184 (6)0.0232 (7)0.0252 (7)−0.0015 (6)0.0115 (5)−0.0030 (6)
N30.0244 (8)0.0450 (11)0.0475 (10)0.0010 (7)0.0176 (7)0.0061 (9)
C10.0235 (9)0.0393 (11)0.0230 (8)0.0008 (8)0.0098 (7)0.0008 (8)
C20.0274 (10)0.0548 (14)0.0264 (9)−0.0065 (10)0.0125 (8)−0.0022 (10)
C30.0222 (9)0.0738 (17)0.0254 (9)0.0009 (10)0.0086 (8)0.0023 (10)
C40.0268 (10)0.0670 (16)0.0350 (10)0.0134 (11)0.0116 (8)0.0175 (11)
C50.0324 (10)0.0443 (13)0.0337 (10)0.0069 (10)0.0157 (8)0.0113 (9)
C60.0240 (8)0.0385 (11)0.0205 (8)0.0027 (8)0.0110 (7)0.0013 (8)
C70.0255 (8)0.0242 (9)0.0232 (8)0.0008 (7)0.0117 (7)−0.0024 (7)
C80.0214 (8)0.0199 (8)0.0242 (8)−0.0021 (7)0.0112 (6)−0.0029 (7)
C90.0216 (8)0.0172 (8)0.0246 (8)−0.0027 (7)0.0108 (6)−0.0050 (7)
C100.0189 (8)0.0216 (8)0.0271 (8)−0.0021 (7)0.0095 (7)−0.0040 (7)
C110.0258 (9)0.0337 (10)0.0276 (9)−0.0023 (8)0.0148 (7)−0.0026 (8)
C120.0276 (9)0.0352 (11)0.0303 (9)−0.0065 (8)0.0171 (7)−0.0070 (8)
C130.0193 (8)0.0301 (10)0.0387 (10)−0.0020 (7)0.0157 (7)−0.0026 (8)
C140.0197 (8)0.0214 (8)0.0239 (8)0.0003 (7)0.0095 (6)−0.0030 (7)
C150.0225 (8)0.0196 (8)0.0221 (7)−0.0030 (7)0.0108 (6)−0.0027 (7)
C160.0207 (8)0.0245 (9)0.0257 (8)−0.0017 (7)0.0106 (7)−0.0032 (7)
C170.0270 (9)0.0287 (10)0.0251 (8)−0.0012 (8)0.0077 (7)0.0007 (8)
C180.0327 (10)0.0291 (10)0.0240 (8)−0.0073 (8)0.0131 (7)−0.0024 (8)
C190.0254 (9)0.0305 (10)0.0315 (9)−0.0041 (8)0.0173 (7)−0.0042 (8)
C200.0204 (8)0.0248 (9)0.0262 (8)−0.0013 (7)0.0099 (7)−0.0020 (7)
O1—C131.358 (2)C7—C81.472 (2)
O1—C101.375 (2)C8—C141.377 (2)
O2—C71.228 (2)C8—C91.430 (2)
O3—N31.233 (2)C9—C101.451 (2)
O4—N31.219 (2)C10—C111.362 (2)
N1—C141.353 (2)C11—C121.410 (3)
N1—N21.3616 (18)C11—H11A0.98 (2)
N1—C151.429 (2)C12—C131.346 (3)
N2—C91.335 (2)C12—H12A0.96 (2)
N3—C131.414 (2)C14—H14A0.96 (2)
C1—C21.390 (3)C15—C161.387 (2)
C1—C61.395 (3)C15—C201.391 (2)
C1—H1A0.97 (2)C16—C171.389 (2)
C2—C31.380 (3)C16—H16A0.968 (18)
C2—H2A0.98 (2)C17—C181.385 (3)
C3—C41.388 (3)C17—H17A0.94 (2)
C3—H3A0.99 (2)C18—C191.382 (3)
C4—C51.389 (3)C18—H18A0.96 (2)
C4—H4A1.00 (3)C19—C201.387 (2)
C5—C61.396 (3)C19—H19A0.939 (18)
C5—H5A0.97 (2)C20—H20A0.933 (18)
C6—C71.494 (2)
C13—O1—C10104.57 (13)C8—C9—C10130.30 (15)
C14—N1—N2112.10 (13)C11—C10—O1110.18 (14)
C14—N1—C15127.88 (14)C11—C10—C9134.91 (16)
N2—N1—C15120.00 (13)O1—C10—C9114.89 (14)
C9—N2—N1104.88 (13)C10—C11—C12107.23 (16)
O4—N3—O3124.47 (17)C10—C11—H11A125.5 (14)
O4—N3—C13119.14 (17)C12—C11—H11A127.2 (14)
O3—N3—C13116.38 (17)C13—C12—C11105.03 (16)
C2—C1—C6119.85 (19)C13—C12—H12A124.0 (13)
C2—C1—H1A121.2 (11)C11—C12—H12A131.0 (13)
C6—C1—H1A118.9 (11)C12—C13—O1112.99 (15)
C3—C2—C1120.1 (2)C12—C13—N3130.37 (17)
C3—C2—H2A123.0 (14)O1—C13—N3116.60 (16)
C1—C2—H2A116.9 (13)N1—C14—C8107.64 (15)
C2—C3—C4120.51 (19)N1—C14—H14A120.4 (11)
C2—C3—H3A118.6 (14)C8—C14—H14A132.0 (11)
C4—C3—H3A120.8 (14)C16—C15—C20120.80 (16)
C3—C4—C5119.7 (2)C16—C15—N1119.63 (14)
C3—C4—H4A122.8 (14)C20—C15—N1119.55 (15)
C5—C4—H4A117.5 (14)C15—C16—C17119.16 (16)
C4—C5—C6120.2 (2)C15—C16—H16A117.3 (11)
C4—C5—H5A122.1 (13)C17—C16—H16A123.6 (11)
C6—C5—H5A117.7 (14)C18—C17—C16120.84 (17)
C1—C6—C5119.62 (17)C18—C17—H17A119.5 (13)
C1—C6—C7122.14 (17)C16—C17—H17A119.6 (13)
C5—C6—C7118.10 (18)C19—C18—C17119.16 (17)
O2—C7—C8122.64 (16)C19—C18—H18A119.1 (12)
O2—C7—C6119.53 (15)C17—C18—H18A121.7 (12)
C8—C7—C6117.83 (15)C18—C19—C20121.20 (17)
C14—C8—C9104.11 (14)C18—C19—H19A121.7 (11)
C14—C8—C7124.45 (15)C20—C19—H19A117.1 (11)
C9—C8—C7131.35 (15)C19—C20—C15118.82 (16)
N2—C9—C8111.25 (14)C19—C20—H20A118.7 (11)
N2—C9—C10118.45 (15)C15—C20—H20A122.5 (11)
C14—N1—N2—C91.32 (18)C8—C9—C10—O1−178.34 (16)
C15—N1—N2—C9179.83 (15)O1—C10—C11—C12−0.2 (2)
C6—C1—C2—C3−1.6 (3)C9—C10—C11—C12178.25 (19)
C1—C2—C3—C4−0.4 (3)C10—C11—C12—C130.3 (2)
C2—C3—C4—C52.1 (3)C11—C12—C13—O1−0.3 (2)
C3—C4—C5—C6−1.6 (3)C11—C12—C13—N3−177.8 (2)
C2—C1—C6—C52.1 (3)C10—O1—C13—C120.2 (2)
C2—C1—C6—C7−173.56 (16)C10—O1—C13—N3178.07 (16)
C4—C5—C6—C1−0.5 (3)O4—N3—C13—C12178.3 (2)
C4—C5—C6—C7175.34 (18)O3—N3—C13—C12−0.8 (3)
C1—C6—C7—O2135.87 (18)O4—N3—C13—O10.9 (3)
C5—C6—C7—O2−39.8 (2)O3—N3—C13—O1−178.27 (17)
C1—C6—C7—C8−45.1 (2)N2—N1—C14—C8−1.0 (2)
C5—C6—C7—C8139.15 (17)C15—N1—C14—C8−179.35 (16)
O2—C7—C8—C14159.65 (17)C9—C8—C14—N10.24 (19)
C6—C7—C8—C14−19.3 (3)C7—C8—C14—N1−176.58 (16)
O2—C7—C8—C9−16.2 (3)C14—N1—C15—C16170.60 (17)
C6—C7—C8—C9164.80 (17)N2—N1—C15—C16−7.6 (2)
N1—N2—C9—C8−1.14 (18)C14—N1—C15—C20−7.7 (3)
N1—N2—C9—C10178.84 (14)N2—N1—C15—C20174.08 (15)
C14—C8—C9—N20.58 (19)C20—C15—C16—C172.0 (3)
C7—C8—C9—N2177.09 (17)N1—C15—C16—C17−176.24 (16)
C14—C8—C9—C10−179.40 (17)C15—C16—C17—C18−1.1 (3)
C7—C8—C9—C10−2.9 (3)C16—C17—C18—C19−0.4 (3)
C13—O1—C10—C110.0 (2)C17—C18—C19—C201.1 (3)
C13—O1—C10—C9−178.77 (15)C18—C19—C20—C15−0.2 (3)
N2—C9—C10—C11−176.7 (2)C16—C15—C20—C19−1.3 (3)
C8—C9—C10—C113.2 (3)N1—C15—C20—C19176.91 (16)
N2—C9—C10—O11.7 (2)
Cg1 is the centroid of the C15–C20 benzene ring.
D—H···AD—HH···AD···AD—H···A
C2—H2A···O4i0.98 (2)2.45 (2)3.190 (3)131.8 (17)
C11—H11A···O20.98 (3)2.23 (3)2.950 (3)130 (2)
C14—H14A···O3ii0.96 (2)2.43 (2)3.379 (3)169.3 (17)
C18—H18A···Cg1iii0.96 (2)2.96 (2)3.671 (2)132.0 (16)
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the C15–C20 benzene ring.

D—H⋯AD—HH⋯ADAD—H⋯A
C2—H2A⋯O4i0.98 (2)2.45 (2)3.190 (3)131.8 (17)
C11—H11A⋯O20.98 (3)2.23 (3)2.950 (3)130 (2)
C14—H14A⋯O3ii0.96 (2)2.43 (2)3.379 (3)169.3 (17)
C18—H18ACg1iii0.96 (2)2.96 (2)3.671 (2)132.0 (16)

Symmetry codes: (i) ; (ii) ; (iii) .

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Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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Authors:  Jia Hao Goh; Hoong-Kun Fun; N Satheesh Rai; B Kalluraya
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-11-14

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-11-14

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Journal:  Eur J Med Chem       Date:  2007-08-30       Impact factor: 6.514

5.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
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1.  (4-Chloro-phen-yl)[1-(4-methoxy-phen-yl)-3-(5-nitro-2-fur-yl)-1H-pyrazol-4-yl]methanone.

Authors:  Jia Hao Goh; Hoong-Kun Fun; B Kalluraya; N Satheesh Rai
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-04-14
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