Literature DB >> 21579237

Methyl 12-bromo-dehydro-abietate.

Hong Gao1, Zhan-Qian Song, Shi-Bin Shang.   

Abstract

THE TITLE COMPOUND [SYSTEMATIC NAME: (1R)-methyl 6-bromo-7-isopropyl-1,4a-dimethyl-1,2,3,4,4a,9,10,10a-octa-hydro-phen-anthrene-1-carboxyl-ate], C(21)H(29)BrO(2), was synthesized from N-bromo-succinimide and methyl dehydro-abietate, which was prepared through an esterification reaction using dehydro-abietic acid and methanol as raw materials. The three six-membered rings adopt planar (mean deviation = 0.002 Å) half-chair and chair conformations. The two cyclo-hexane rings form a trans ring junction with the two methyl groups in axial positions. The crystal structure is stabilized by weak inter-molecular C-H⋯O contacts along the b axis.

Entities:  

Year:  2010        PMID: 21579237      PMCID: PMC2979028          DOI: 10.1107/S1600536810012201

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the isolation of dehydro­abietic acid, see: Halbrook & Lawrence (1966 ▶). For the preparation and use of dehydro­abietic acid derivatives, see: Fonseca et al. (2001 ▶); Pan et al. (2006 ▶). For the synthesis of the title compound, see: Esteves et al. (1999 ▶). For related structures, see: Zhang et al. (2006 ▶); Rao et al. (2009 ▶).

Experimental

Crystal data

C21H29BrO2 M = 393.35 Monoclinic, a = 13.888 (3) Å b = 6.1260 (12) Å c = 23.382 (5) Å β = 103.19 (3)° V = 1936.8 (7) Å3 Z = 4 Mo Kα radiation μ = 2.13 mm−1 T = 293 K 0.30 × 0.20 × 0.20 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.567, T max = 0.675 3657 measured reflections 3505 independent reflections 2754 reflections with I > 2σ(I) R int = 0.035 3 standard reflections every 200 reflections intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.047 wR(F 2) = 0.128 S = 1.01 3505 reflections 218 parameters 1 restraint H-atom parameters constrained Δρmax = 0.64 e Å−3 Δρmin = −0.40 e Å−3 Absolute structure: Flack (1983 ▶), 1563 Friedel pairs Flack parameter: 0.010 (15) Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994 ▶); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810012201/zq2035sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810012201/zq2035Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C21H29BrO2F(000) = 824
Mr = 393.35Dx = 1.349 Mg m3
Monoclinic, C2Melting point: 416 K
Hall symbol: C 2yMo Kα radiation, λ = 0.71073 Å
a = 13.888 (3) ÅCell parameters from 25 reflections
b = 6.1260 (12) Åθ = 10–13°
c = 23.382 (5) ŵ = 2.13 mm1
β = 103.19 (3)°T = 293 K
V = 1936.8 (7) Å3Rod, colorless
Z = 40.30 × 0.20 × 0.20 mm
Enraf–Nonius CAD-4 diffractometer2754 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.035
graphiteθmax = 25.3°, θmin = 1.8°
ω/2θ scansh = 0→16
Absorption correction: ψ scan (North et al., 1968)k = −7→7
Tmin = 0.567, Tmax = 0.675l = −28→27
3657 measured reflections3 standard reflections every 200 reflections
3505 independent reflections intensity decay: 1%
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.047w = 1/[σ2(Fo2) + (0.083P)2] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.128(Δ/σ)max = 0.001
S = 1.01Δρmax = 0.64 e Å3
3505 reflectionsΔρmin = −0.40 e Å3
218 parametersExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
1 restraintExtinction coefficient: 0.0175 (13)
Primary atom site location: structure-invariant direct methodsAbsolute structure: Flack (1983), 1563 Friedel pairs
Secondary atom site location: difference Fourier mapFlack parameter: 0.010 (15)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br0.52734 (4)0.20204 (10)0.41747 (2)0.0569 (3)
C10.4547 (4)−0.1955 (9)0.2063 (2)0.0396 (12)
H1A0.4131−0.21110.23420.048*
H1B0.4601−0.04090.19850.048*
O10.6426 (4)−0.1241 (7)0.0769 (2)0.0621 (13)
O20.6696 (4)−0.4626 (8)0.0554 (2)0.0841 (17)
C20.4054 (3)−0.3087 (14)0.1497 (2)0.0478 (12)
H2A0.3425−0.23850.13340.057*
H2B0.3922−0.45940.15810.057*
C30.4686 (3)−0.3032 (13)0.10451 (19)0.0448 (11)
H3A0.4744−0.15320.09240.054*
H3B0.4354−0.38510.07010.054*
C40.5724 (4)−0.3975 (9)0.1272 (2)0.0387 (12)
C50.6204 (3)−0.2861 (11)0.18667 (18)0.0324 (9)
H5A0.6258−0.13180.17680.039*
C60.7266 (4)−0.3588 (9)0.2118 (2)0.0423 (14)
H6A0.7269−0.49960.23090.051*
H6B0.7614−0.37320.18050.051*
C70.7773 (4)−0.1913 (11)0.2557 (3)0.0502 (15)
H7A0.7984−0.07090.23460.060*
H7B0.8361−0.25680.28010.060*
C80.7139 (3)−0.1013 (9)0.2953 (2)0.0361 (11)
C90.6128 (3)−0.1423 (8)0.2847 (2)0.0320 (11)
C100.5593 (3)−0.2863 (11)0.23428 (18)0.0319 (9)
C110.5608 (4)−0.0505 (9)0.3232 (2)0.0357 (11)
H11A0.4930−0.07380.31700.043*
C120.6087 (4)0.0746 (8)0.3703 (2)0.0339 (11)
C130.7099 (3)0.1180 (8)0.3821 (2)0.0347 (11)
C140.7593 (4)0.0265 (9)0.3430 (2)0.0406 (12)
H14A0.82690.05170.34900.049*
C150.7620 (4)0.2626 (9)0.4324 (2)0.0419 (14)
H15A0.72390.25760.46290.050*
C160.8676 (4)0.1866 (15)0.4603 (3)0.0641 (15)
H16A0.86620.03790.47300.096*
H16B0.89520.27740.49340.096*
H16C0.90760.19690.43180.096*
C170.7635 (5)0.5004 (10)0.4120 (3)0.0601 (17)
H17A0.69730.54690.39460.090*
H17B0.80330.51130.38340.090*
H17C0.79090.59180.44500.090*
C180.6337 (4)−0.3401 (9)0.0833 (2)0.0398 (14)
C190.5695 (5)−0.6506 (9)0.1291 (3)0.0527 (16)
H19A0.5388−0.70560.09080.079*
H19B0.5321−0.69660.15680.079*
H19C0.6357−0.70630.14080.079*
C200.5494 (4)−0.5132 (8)0.2616 (2)0.0421 (13)
H20A0.6140−0.56930.27890.063*
H20B0.5160−0.61130.23160.063*
H20C0.5121−0.49950.29130.063*
C210.6987 (5)−0.0491 (12)0.0371 (3)0.0620 (18)
H21A0.69920.10760.03680.093*
H21B0.6697−0.1020−0.00160.093*
H21C0.7653−0.10210.04920.093*
U11U22U33U12U13U23
Br0.0488 (3)0.0726 (4)0.0544 (3)−0.0030 (4)0.0226 (2)−0.0201 (4)
C10.033 (3)0.045 (3)0.040 (3)0.000 (2)0.008 (2)−0.005 (2)
O10.100 (4)0.038 (2)0.066 (3)−0.015 (2)0.057 (3)−0.002 (2)
O20.135 (5)0.052 (3)0.093 (4)0.006 (3)0.082 (4)−0.007 (3)
C20.042 (3)0.052 (3)0.048 (3)−0.001 (4)0.006 (2)−0.007 (4)
C30.050 (3)0.048 (3)0.035 (2)−0.004 (4)0.006 (2)−0.002 (4)
C40.046 (3)0.028 (2)0.044 (3)−0.005 (2)0.015 (2)−0.005 (2)
C50.038 (2)0.023 (2)0.038 (2)−0.003 (3)0.0137 (18)0.000 (3)
C60.038 (3)0.044 (4)0.049 (3)0.006 (2)0.018 (2)−0.001 (2)
C70.029 (3)0.075 (4)0.052 (3)0.003 (3)0.018 (3)−0.005 (3)
C80.033 (3)0.041 (3)0.034 (3)0.000 (2)0.008 (2)0.003 (2)
C90.028 (3)0.029 (3)0.038 (3)0.004 (2)0.005 (2)0.006 (2)
C100.030 (2)0.026 (2)0.041 (2)−0.002 (3)0.0099 (17)−0.002 (3)
C110.030 (3)0.039 (3)0.040 (3)−0.003 (2)0.013 (2)0.000 (2)
C120.039 (3)0.031 (3)0.034 (3)0.005 (2)0.013 (2)0.004 (2)
C130.036 (3)0.034 (3)0.031 (3)−0.004 (2)0.001 (2)0.006 (2)
C140.027 (2)0.049 (3)0.045 (3)−0.006 (2)0.008 (2)0.001 (3)
C150.043 (3)0.046 (4)0.035 (3)−0.004 (2)0.005 (2)−0.001 (2)
C160.058 (3)0.060 (4)0.063 (3)−0.006 (4)−0.008 (3)−0.006 (4)
C170.067 (4)0.044 (4)0.062 (4)−0.008 (3)−0.002 (3)−0.003 (3)
C180.051 (3)0.034 (4)0.039 (3)−0.004 (3)0.019 (2)−0.008 (3)
C190.075 (4)0.028 (3)0.061 (4)−0.011 (3)0.029 (3)−0.010 (3)
C200.053 (3)0.031 (3)0.043 (3)−0.005 (2)0.013 (3)0.004 (2)
C210.090 (5)0.052 (4)0.052 (4)−0.026 (4)0.034 (4)−0.010 (3)
Br—C121.916 (5)C9—C111.393 (7)
C1—C21.512 (8)C9—C101.524 (7)
C1—C101.553 (7)C10—C201.549 (8)
C1—H1A0.9700C11—C121.382 (7)
C1—H1B0.9700C11—H11A0.9300
O1—C181.340 (8)C12—C131.396 (7)
O1—C211.420 (7)C13—C141.381 (7)
O2—C181.178 (7)C13—C151.517 (7)
C2—C31.520 (6)C14—H14A0.9300
C2—H2A0.9700C15—C171.535 (8)
C2—H2B0.9700C15—C161.535 (8)
C3—C41.532 (7)C15—H15A0.9800
C3—H3A0.9700C16—H16A0.9600
C3—H3B0.9700C16—H16B0.9600
C4—C181.517 (7)C16—H16C0.9600
C4—C191.552 (8)C17—H17A0.9600
C4—C51.555 (7)C17—H17B0.9600
C5—C61.524 (6)C17—H17C0.9600
C5—C101.547 (5)C19—H19A0.9600
C5—H5A0.9800C19—H19B0.9600
C6—C71.507 (8)C19—H19C0.9600
C6—H6A0.9700C20—H20A0.9600
C6—H6B0.9700C20—H20B0.9600
C7—C81.519 (7)C20—H20C0.9600
C7—H7A0.9700C21—H21A0.9600
C7—H7B0.9700C21—H21B0.9600
C8—C141.391 (7)C21—H21C0.9600
C8—C91.391 (7)
C2—C1—C10113.4 (4)C20—C10—C1109.5 (4)
C2—C1—H1A108.9C5—C10—C1108.1 (4)
C10—C1—H1A108.9C12—C11—C9120.8 (4)
C2—C1—H1B108.9C12—C11—H11A119.6
C10—C1—H1B108.9C9—C11—H11A119.6
H1A—C1—H1B107.7C11—C12—C13122.9 (4)
C18—O1—C21118.1 (5)C11—C12—Br116.5 (4)
C1—C2—C3112.3 (5)C13—C12—Br120.5 (4)
C1—C2—H2A109.1C14—C13—C12114.9 (5)
C3—C2—H2A109.1C14—C13—C15122.0 (4)
C1—C2—H2B109.1C12—C13—C15123.1 (5)
C3—C2—H2B109.1C13—C14—C8123.8 (4)
H2A—C2—H2B107.9C13—C14—H14A118.1
C2—C3—C4113.4 (4)C8—C14—H14A118.1
C2—C3—H3A108.9C13—C15—C17110.5 (4)
C4—C3—H3A108.9C13—C15—C16113.1 (5)
C2—C3—H3B108.9C17—C15—C16109.9 (5)
C4—C3—H3B108.9C13—C15—H15A107.7
H3A—C3—H3B107.7C17—C15—H15A107.7
C18—C4—C3107.9 (4)C16—C15—H15A107.7
C18—C4—C19105.9 (4)C15—C16—H16A109.5
C3—C4—C19111.0 (5)C15—C16—H16B109.5
C18—C4—C5108.1 (4)H16A—C16—H16B109.5
C3—C4—C5108.8 (4)C15—C16—H16C109.5
C19—C4—C5115.0 (5)H16A—C16—H16C109.5
C6—C5—C10111.3 (4)H16B—C16—H16C109.5
C6—C5—C4113.4 (4)C15—C17—H17A109.5
C10—C5—C4116.7 (4)C15—C17—H17B109.5
C6—C5—H5A104.7H17A—C17—H17B109.5
C10—C5—H5A104.7C15—C17—H17C109.5
C4—C5—H5A104.7H17A—C17—H17C109.5
C7—C6—C5109.0 (4)H17B—C17—H17C109.5
C7—C6—H6A109.9O2—C18—O1120.4 (5)
C5—C6—H6A109.9O2—C18—C4126.9 (5)
C7—C6—H6B109.9O1—C18—C4112.6 (4)
C5—C6—H6B109.9C4—C19—H19A109.5
H6A—C6—H6B108.3C4—C19—H19B109.5
C6—C7—C8114.6 (4)H19A—C19—H19B109.5
C6—C7—H7A108.6C4—C19—H19C109.5
C8—C7—H7A108.6H19A—C19—H19C109.5
C6—C7—H7B108.6H19B—C19—H19C109.5
C8—C7—H7B108.6C10—C20—H20A109.5
H7A—C7—H7B107.6C10—C20—H20B109.5
C14—C8—C9119.9 (5)H20A—C20—H20B109.5
C14—C8—C7118.2 (4)C10—C20—H20C109.5
C9—C8—C7121.8 (5)H20A—C20—H20C109.5
C8—C9—C11117.6 (5)H20B—C20—H20C109.5
C8—C9—C10122.4 (4)O1—C21—H21A109.5
C11—C9—C10120.0 (4)O1—C21—H21B109.5
C9—C10—C20105.9 (4)H21A—C21—H21B109.5
C9—C10—C5107.8 (4)O1—C21—H21C109.5
C20—C10—C5114.4 (5)H21A—C21—H21C109.5
C9—C10—C1111.3 (5)H21B—C21—H21C109.5
C10—C1—C2—C3−55.4 (8)C6—C5—C10—C1176.2 (5)
C1—C2—C3—C455.2 (9)C4—C5—C10—C1−51.6 (7)
C2—C3—C4—C18−168.5 (6)C2—C1—C10—C9170.0 (5)
C2—C3—C4—C1976.0 (7)C2—C1—C10—C20−73.3 (6)
C2—C3—C4—C5−51.4 (7)C2—C1—C10—C551.8 (7)
C18—C4—C5—C6−60.0 (6)C8—C9—C11—C12−0.6 (7)
C3—C4—C5—C6−176.8 (5)C10—C9—C11—C12177.9 (5)
C19—C4—C5—C658.0 (6)C9—C11—C12—C130.4 (8)
C18—C4—C5—C10168.7 (5)C9—C11—C12—Br177.2 (4)
C3—C4—C5—C1051.8 (6)C11—C12—C13—C140.1 (7)
C19—C4—C5—C10−73.3 (6)Br—C12—C13—C14−176.5 (4)
C10—C5—C6—C7−65.9 (6)C11—C12—C13—C15177.5 (5)
C4—C5—C6—C7160.2 (5)Br—C12—C13—C150.9 (7)
C5—C6—C7—C840.9 (7)C12—C13—C14—C8−0.5 (8)
C6—C7—C8—C14169.8 (5)C15—C13—C14—C8−177.9 (5)
C6—C7—C8—C9−10.7 (8)C9—C8—C14—C130.3 (8)
C14—C8—C9—C110.2 (7)C7—C8—C14—C13179.8 (5)
C7—C8—C9—C11−179.3 (5)C14—C13—C15—C1786.4 (6)
C14—C8—C9—C10−178.2 (5)C12—C13—C15—C17−90.9 (6)
C7—C8—C9—C102.3 (8)C14—C13—C15—C16−37.3 (7)
C8—C9—C10—C2098.6 (5)C12—C13—C15—C16145.4 (5)
C11—C9—C10—C20−79.7 (6)C21—O1—C18—O2−1.8 (10)
C8—C9—C10—C5−24.1 (7)C21—O1—C18—C4179.7 (5)
C11—C9—C10—C5157.5 (5)C3—C4—C18—O2−117.3 (7)
C8—C9—C10—C1−142.5 (5)C19—C4—C18—O21.6 (9)
C11—C9—C10—C139.1 (6)C5—C4—C18—O2125.3 (7)
C6—C5—C10—C955.8 (6)C3—C4—C18—O161.1 (6)
C4—C5—C10—C9−172.0 (5)C19—C4—C18—O1179.9 (5)
C6—C5—C10—C20−61.7 (6)C5—C4—C18—O1−56.4 (6)
C4—C5—C10—C2070.6 (6)
D—H···AD—HH···AD···AD—H···A
C21—H21A···O2i0.962.723.652 (10)165
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C21—H21A⋯O2i0.962.723.652 (10)165

Symmetry code: (i) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Dehydro-abietic acid.

Authors:  Xiao-Ping Rao; Zhan-Qian Song; Shi-Bin Shang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-09-09
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.