Literature DB >> 21579228

3,9-Di-1-naphthyl-2,4,8,10-tetra-oxa-spiro-[5.5]undeca-ne.

Xiuqin Zhang, Yuan Cui, Bin Yu, Xiaoqiang Sun, Qiang Chen.   

Abstract

In the title compound, C(27)H(24)O(4), the 1,3-dioxane rings have chair conformations. The mol-ecule has non-crystallographic twofold rotation symmetry. The dihedral angle between the naphthalene ring systems is 17.96(4)° In the crystal structure, weak inter-molecular C-H⋯π inter-actions contribute to the crystal packing.

Entities:  

Year:  2010        PMID: 21579228      PMCID: PMC2979257          DOI: 10.1107/S1600536810014741

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a related 3,9-diphenyl structure, see: Wang et al. (2006 ▶). For other oxaspiro structures, see: Mihis et al. (2008 ▶); Shi et al. (2009 ▶).

Experimental

Crystal data

C27H24O4 M = 412.46 Monoclinic, a = 14.9040 (15) Å b = 5.7761 (6) Å c = 24.238 (2) Å β = 95.447 (2)° V = 2077.1 (4) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 295 K 0.22 × 0.21 × 0.19 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2003 ▶) T min = 0.981, T max = 0.984 11731 measured reflections 4067 independent reflections 2961 reflections with I > 2σ(I) R int = 0.024

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.158 S = 1.03 4067 reflections 280 parameters H-atom parameters constrained Δρmax = 0.16 e Å−3 Δρmin = −0.17 e Å−3 Data collection: APEX2 (Bruker, 2003 ▶); cell refinement: SAINT (Bruker, 2003 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810014741/si2258sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810014741/si2258Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C27H24O4F(000) = 872
Mr = 412.46Dx = 1.319 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 14.9040 (15) ÅCell parameters from 4101 reflections
b = 5.7761 (6) Åθ = 2.8–28.9°
c = 24.238 (2) ŵ = 0.09 mm1
β = 95.447 (2)°T = 295 K
V = 2077.1 (4) Å3Block, colorless
Z = 40.22 × 0.21 × 0.19 mm
Bruker APEXII CCD diffractometer4067 independent reflections
Radiation source: fine-focus sealed tube2961 reflections with I > 2σ(I)
graphiteRint = 0.024
φ and ω scansθmax = 26.0°, θmin = 1.4°
Absorption correction: multi-scan (SADABS; Bruker, 2003)h = −18→16
Tmin = 0.981, Tmax = 0.984k = −6→7
11731 measured reflectionsl = −29→29
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.042Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.158H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.1P)2 + 0.1334P] where P = (Fo2 + 2Fc2)/3
4067 reflections(Δ/σ)max = 0.001
280 parametersΔρmax = 0.16 e Å3
0 restraintsΔρmin = −0.17 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.13414 (8)0.84377 (18)0.45655 (4)0.0446 (3)
O20.22638 (8)0.6064 (2)0.40974 (4)0.0515 (3)
O30.26584 (7)0.18521 (18)0.56082 (5)0.0480 (3)
O40.36401 (8)0.4833 (2)0.54471 (5)0.0547 (3)
C10.34069 (15)−0.1745 (4)0.71697 (8)0.0678 (6)
H10.2942−0.17320.74000.081*
C20.40805 (16)−0.3418 (4)0.72465 (9)0.0720 (6)
H20.4063−0.45130.75270.086*
C30.47631 (14)−0.3452 (3)0.69128 (9)0.0650 (6)
H30.5207−0.45840.69650.078*
C40.48080 (12)−0.1802 (3)0.64906 (8)0.0539 (5)
C50.55262 (13)−0.1798 (4)0.61468 (9)0.0700 (6)
H50.5969−0.29340.61930.084*
C60.55731 (14)−0.0168 (4)0.57552 (10)0.0790 (7)
H60.6062−0.01490.55430.095*
C70.48923 (13)0.1507 (4)0.56622 (9)0.0653 (5)
H70.49330.26110.53860.078*
C80.41737 (12)0.1540 (3)0.59693 (7)0.0488 (4)
C90.41222 (11)−0.0103 (3)0.64054 (7)0.0463 (4)
C100.34223 (12)−0.0132 (3)0.67623 (7)0.0556 (5)
H100.29660.09700.67170.067*
C110.34087 (11)0.3197 (3)0.58327 (7)0.0460 (4)
H110.32590.39800.61710.055*
C120.18859 (11)0.3248 (3)0.54602 (7)0.0488 (4)
H12A0.16790.39170.57930.059*
H12B0.14060.22830.52880.059*
C130.29204 (12)0.6434 (3)0.53143 (7)0.0523 (5)
H13A0.31040.75750.50540.063*
H13B0.27840.72390.56480.063*
C140.20848 (10)0.5180 (3)0.50633 (6)0.0406 (4)
C150.12684 (12)0.6778 (3)0.49917 (7)0.0495 (4)
H15A0.07290.58570.49040.059*
H15B0.12070.75760.53380.059*
C160.22281 (12)0.4224 (3)0.44935 (7)0.0506 (4)
H16A0.27870.33530.45150.061*
H16B0.17390.31790.43730.061*
C170.14617 (11)0.7325 (3)0.40554 (6)0.0413 (4)
H170.09540.62810.39560.050*
C180.14747 (11)0.9196 (3)0.36260 (6)0.0430 (4)
C190.22421 (13)0.9714 (3)0.33883 (7)0.0554 (5)
H190.27550.88130.34700.066*
C200.22692 (15)1.1598 (4)0.30208 (8)0.0674 (6)
H200.27961.19160.28580.081*
C210.15360 (16)1.2942 (4)0.29038 (7)0.0670 (6)
H210.15691.42060.26690.080*
C220.07234 (14)1.2462 (3)0.31316 (7)0.0535 (5)
C230.06793 (12)1.0532 (3)0.34917 (6)0.0442 (4)
C24−0.01615 (12)1.0029 (3)0.36927 (7)0.0543 (5)
H24−0.02070.87750.39290.065*
C25−0.09045 (14)1.1344 (4)0.35467 (8)0.0687 (6)
H25−0.14521.09510.36760.082*
C26−0.08524 (17)1.3280 (4)0.32048 (9)0.0761 (7)
H26−0.13591.41930.31140.091*
C27−0.00558 (17)1.3820 (4)0.30050 (8)0.0711 (6)
H27−0.00241.51140.27800.085*
U11U22U33U12U13U23
O10.0659 (7)0.0329 (6)0.0345 (6)0.0103 (5)0.0018 (5)0.0004 (4)
O20.0625 (8)0.0500 (7)0.0416 (6)0.0150 (6)0.0034 (5)−0.0012 (5)
O30.0504 (7)0.0305 (6)0.0603 (7)0.0003 (5)−0.0103 (5)0.0055 (5)
O40.0552 (7)0.0417 (7)0.0639 (8)−0.0075 (5)−0.0122 (6)0.0112 (6)
C10.0774 (14)0.0711 (14)0.0534 (11)−0.0021 (11)−0.0019 (9)0.0115 (10)
C20.0816 (15)0.0645 (14)0.0651 (12)−0.0064 (11)−0.0180 (11)0.0232 (10)
C30.0643 (12)0.0498 (11)0.0750 (13)−0.0001 (9)−0.0245 (10)0.0110 (9)
C40.0495 (10)0.0471 (10)0.0603 (10)−0.0024 (8)−0.0204 (8)0.0018 (8)
C50.0489 (11)0.0699 (14)0.0879 (15)0.0110 (10)−0.0104 (10)0.0089 (12)
C60.0557 (12)0.0890 (17)0.0927 (16)0.0088 (12)0.0089 (11)0.0187 (14)
C70.0582 (12)0.0679 (13)0.0684 (12)−0.0001 (10)−0.0016 (9)0.0152 (10)
C80.0509 (10)0.0427 (9)0.0494 (9)−0.0029 (8)−0.0131 (7)−0.0005 (7)
C90.0490 (9)0.0402 (9)0.0458 (9)−0.0050 (7)−0.0161 (7)−0.0032 (7)
C100.0614 (11)0.0527 (11)0.0502 (10)0.0036 (9)−0.0078 (8)0.0022 (8)
C110.0553 (10)0.0358 (9)0.0443 (8)−0.0043 (7)−0.0088 (7)−0.0008 (7)
C120.0504 (10)0.0360 (9)0.0587 (10)0.0043 (7)−0.0019 (8)0.0086 (7)
C130.0690 (12)0.0320 (9)0.0525 (10)−0.0035 (8)−0.0110 (8)0.0037 (7)
C140.0500 (9)0.0295 (8)0.0410 (8)0.0029 (7)−0.0025 (7)−0.0009 (6)
C150.0640 (11)0.0422 (9)0.0428 (9)0.0111 (8)0.0075 (8)0.0072 (7)
C160.0658 (11)0.0363 (9)0.0476 (9)0.0127 (8)−0.0055 (8)−0.0054 (7)
C170.0498 (9)0.0358 (8)0.0369 (8)0.0040 (7)−0.0028 (6)−0.0062 (6)
C180.0547 (10)0.0423 (9)0.0307 (7)−0.0015 (8)−0.0035 (6)−0.0065 (7)
C190.0613 (11)0.0614 (12)0.0429 (9)−0.0007 (9)0.0020 (8)−0.0036 (8)
C200.0767 (14)0.0766 (15)0.0497 (11)−0.0168 (12)0.0099 (10)0.0028 (10)
C210.1016 (17)0.0567 (12)0.0406 (9)−0.0183 (12)−0.0041 (10)0.0068 (8)
C220.0810 (13)0.0434 (9)0.0326 (8)0.0004 (9)−0.0125 (8)−0.0030 (7)
C230.0622 (10)0.0398 (9)0.0283 (7)0.0006 (8)−0.0074 (7)−0.0060 (6)
C240.0612 (11)0.0571 (11)0.0429 (9)0.0068 (9)−0.0034 (8)−0.0002 (8)
C250.0664 (13)0.0836 (15)0.0534 (11)0.0179 (11)−0.0090 (9)−0.0104 (10)
C260.0882 (16)0.0758 (16)0.0589 (12)0.0347 (13)−0.0216 (11)−0.0084 (11)
C270.1127 (19)0.0499 (11)0.0449 (10)0.0161 (12)−0.0234 (11)0.0012 (9)
O1—C171.4198 (18)C12—H12B0.9700
O1—C151.4211 (19)C13—C141.517 (2)
O2—C171.3954 (18)C13—H13A0.9700
O2—C161.437 (2)C13—H13B0.9700
O3—C121.4233 (18)C14—C161.521 (2)
O3—C111.4265 (19)C14—C151.524 (2)
O4—C111.395 (2)C15—H15A0.9700
O4—C131.429 (2)C15—H15B0.9700
C1—C101.360 (3)C16—H16A0.9700
C1—C21.393 (3)C16—H16B0.9700
C1—H10.9300C17—C181.502 (2)
C2—C31.359 (3)C17—H170.9800
C2—H20.9300C18—C191.362 (2)
C3—C41.404 (3)C18—C231.426 (2)
C3—H30.9300C19—C201.409 (3)
C4—C51.418 (3)C19—H190.9300
C4—C91.418 (2)C20—C211.349 (3)
C5—C61.343 (3)C20—H200.9300
C5—H50.9300C21—C221.406 (3)
C6—C71.405 (3)C21—H210.9300
C6—H60.9300C22—C271.411 (3)
C7—C81.361 (3)C22—C231.421 (2)
C7—H70.9300C23—C241.417 (2)
C8—C91.428 (2)C24—C251.362 (3)
C8—C111.502 (2)C24—H240.9300
C9—C101.417 (3)C25—C261.398 (3)
C10—H100.9300C25—H250.9300
C11—H110.9800C26—C271.360 (3)
C12—C141.521 (2)C26—H260.9300
C12—H12A0.9700C27—H270.9300
C17—O1—C15110.63 (12)C13—C14—C16110.89 (14)
C17—O2—C16110.43 (13)C12—C14—C16111.14 (13)
C12—O3—C11111.94 (13)C13—C14—C15111.88 (14)
C11—O4—C13111.16 (14)C12—C14—C15108.36 (13)
C10—C1—C2120.7 (2)C16—C14—C15107.20 (12)
C10—C1—H1119.6O1—C15—C14112.09 (13)
C2—C1—H1119.6O1—C15—H15A109.2
C3—C2—C1120.09 (19)C14—C15—H15A109.2
C3—C2—H2120.0O1—C15—H15B109.2
C1—C2—H2120.0C14—C15—H15B109.2
C2—C3—C4120.93 (19)H15A—C15—H15B107.9
C2—C3—H3119.5O2—C16—C14110.83 (13)
C4—C3—H3119.5O2—C16—H16A109.5
C3—C4—C5121.35 (18)C14—C16—H16A109.5
C3—C4—C9119.49 (19)O2—C16—H16B109.5
C5—C4—C9119.16 (17)C14—C16—H16B109.5
C6—C5—C4120.62 (19)H16A—C16—H16B108.1
C6—C5—H5119.7O2—C17—O1110.54 (11)
C4—C5—H5119.7O2—C17—C18111.03 (13)
C5—C6—C7120.7 (2)O1—C17—C18106.80 (12)
C5—C6—H6119.6O2—C17—H17109.5
C7—C6—H6119.6O1—C17—H17109.5
C8—C7—C6121.05 (19)C18—C17—H17109.5
C8—C7—H7119.5C19—C18—C23119.86 (16)
C6—C7—H7119.5C19—C18—C17121.19 (15)
C7—C8—C9119.73 (16)C23—C18—C17118.84 (14)
C7—C8—C11120.58 (16)C18—C19—C20120.83 (18)
C9—C8—C11119.59 (16)C18—C19—H19119.6
C10—C9—C4117.72 (16)C20—C19—H19119.6
C10—C9—C8123.65 (16)C21—C20—C19120.41 (19)
C4—C9—C8118.63 (17)C21—C20—H20119.8
C1—C10—C9121.03 (18)C19—C20—H20119.8
C1—C10—H10119.5C20—C21—C22121.00 (18)
C9—C10—H10119.5C20—C21—H21119.5
O4—C11—O3110.36 (12)C22—C21—H21119.5
O4—C11—C8110.41 (14)C21—C22—C27121.80 (19)
O3—C11—C8106.74 (13)C21—C22—C23119.21 (18)
O4—C11—H11109.8C27—C22—C23118.98 (19)
O3—C11—H11109.8C24—C23—C22117.77 (16)
C8—C11—H11109.8C24—C23—C18123.62 (15)
O3—C12—C14111.92 (13)C22—C23—C18118.60 (16)
O3—C12—H12A109.2C25—C24—C23121.35 (19)
C14—C12—H12A109.2C25—C24—H24119.3
O3—C12—H12B109.2C23—C24—H24119.3
C14—C12—H12B109.2C24—C25—C26120.7 (2)
H12A—C12—H12B107.9C24—C25—H25119.7
O4—C13—C14110.57 (13)C26—C25—H25119.7
O4—C13—H13A109.5C27—C26—C25119.58 (19)
C14—C13—H13A109.5C27—C26—H26120.2
O4—C13—H13B109.5C25—C26—H26120.2
C14—C13—H13B109.5C26—C27—C22121.57 (19)
H13A—C13—H13B108.1C26—C27—H27119.2
C13—C14—C12107.37 (13)C22—C27—H27119.2
C10—C1—C2—C30.0 (3)C17—O1—C15—C1456.96 (17)
C1—C2—C3—C40.6 (3)C13—C14—C15—O170.48 (17)
C2—C3—C4—C5178.8 (2)C12—C14—C15—O1−171.34 (13)
C2—C3—C4—C9−1.1 (3)C16—C14—C15—O1−51.30 (18)
C3—C4—C5—C6−178.1 (2)C17—O2—C16—C14−59.81 (17)
C9—C4—C5—C61.9 (3)C13—C14—C16—O2−70.38 (17)
C4—C5—C6—C7−2.7 (4)C12—C14—C16—O2170.25 (13)
C5—C6—C7—C80.7 (3)C15—C14—C16—O252.01 (18)
C6—C7—C8—C92.1 (3)C16—O2—C17—O163.95 (16)
C6—C7—C8—C11−174.38 (18)C16—O2—C17—C18−177.72 (12)
C3—C4—C9—C101.0 (2)C15—O1—C17—O2−62.50 (17)
C5—C4—C9—C10−178.95 (17)C15—O1—C17—C18176.62 (13)
C3—C4—C9—C8−179.18 (15)O2—C17—C18—C19−9.1 (2)
C5—C4—C9—C80.9 (2)O1—C17—C18—C19111.48 (16)
C7—C8—C9—C10177.00 (17)O2—C17—C18—C23174.59 (12)
C11—C8—C9—C10−6.5 (2)O1—C17—C18—C23−64.84 (17)
C7—C8—C9—C4−2.8 (2)C23—C18—C19—C201.7 (2)
C11—C8—C9—C4173.70 (14)C17—C18—C19—C20−174.60 (15)
C2—C1—C10—C9−0.1 (3)C18—C19—C20—C210.9 (3)
C4—C9—C10—C1−0.4 (2)C19—C20—C21—C22−1.8 (3)
C8—C9—C10—C1179.76 (17)C20—C21—C22—C27−178.67 (17)
C13—O4—C11—O362.51 (17)C20—C21—C22—C230.2 (3)
C13—O4—C11—C8−179.72 (12)C21—C22—C23—C24−176.99 (15)
C12—O3—C11—O4−59.83 (17)C27—C22—C23—C241.9 (2)
C12—O3—C11—C8−179.84 (13)C21—C22—C23—C182.3 (2)
C7—C8—C11—O4−11.1 (2)C27—C22—C23—C18−178.80 (14)
C9—C8—C11—O4172.40 (13)C19—C18—C23—C24176.01 (15)
C7—C8—C11—O3108.84 (19)C17—C18—C23—C24−7.6 (2)
C9—C8—C11—O3−67.62 (18)C19—C18—C23—C22−3.2 (2)
C11—O3—C12—C1455.23 (17)C17—C18—C23—C22173.15 (13)
C11—O4—C13—C14−60.70 (17)C22—C23—C24—C250.0 (2)
O4—C13—C14—C1253.24 (18)C18—C23—C24—C25−179.21 (16)
O4—C13—C14—C16−68.36 (17)C23—C24—C25—C26−1.8 (3)
O4—C13—C14—C15172.01 (13)C24—C25—C26—C271.6 (3)
O3—C12—C14—C13−51.13 (18)C25—C26—C27—C220.4 (3)
O3—C12—C14—C1670.32 (17)C21—C22—C27—C26176.72 (19)
O3—C12—C14—C15−172.14 (13)C23—C22—C27—C26−2.2 (3)
Cg5 and Cg6 are the centroids of the C18–C23 and C22–C27 naphthyl rings, respectively.
D—H···AD—HH···AD···AD—H···A
C16—H16B···Cg5i0.972.953.5827 (19)124
C27—H27···Cg6ii0.932.943.754 (2)147
Table 1

Hydrogen-bond geometry (Å, °)

Cg5 and Cg6 are the centroids of the C18–C23 and C22–C27 rings, respectively.

D—H⋯AD—HH⋯ADAD—H⋯A
C16—H16BCg5i0.972.953.5827 (19)124
C27—H27⋯Cg6ii0.932.943.754 (2)147

Symmetry codes: (i) ; (ii) .

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-10

3.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20

4.  Synthesis and structure of new 3,3,9,9-tetrasubstituted-2,4,8,10-tetraoxaspiro[5.5]undecane derivatives.

Authors:  Alin Mihiş; Eric Condamine; Elena Bogdan; Anamaria Terec; Tibor Kurtán; Ion Grosu
Journal:  Molecules       Date:  2008-11-17       Impact factor: 4.411

  4 in total

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