Literature DB >> 21579220

4-(2-Oxa-6-aza-spiro-[3.3]hept-6-yl)-benzo-nitrile.

Jian Li1, Ting Xu, Peng-Bo Wu, Jing Lu, Yao Tang.   

Abstract

In the title compound, C(12)H(12)N(2)O, the azetidine ring (r.m.s. deviation = 0.021 Å) and the oxetane ring (r.m.s. deviation = 0.014 Å) are nearly perpendicular to each other [dihedral angle = 89.7 (1)°]. The azetidine ring is twisted out of the plane of the benzene ring by 18.3 (1)°. In the crystal structure, mol-ecules are linked to form chains along the c axis by C-H⋯O hydrogen bonds.

Entities:  

Year:  2010        PMID: 21579220      PMCID: PMC2979228          DOI: 10.1107/S1600536810012936

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

The title compound is a key inter­mediate to synthesize (pyrrolo[3,4-c]pyrazol-3-yl)benzamide derivatives. For the anti-tumor effect of these derivatives, see: Fancelli et al. (2005 ▶).

Experimental

Crystal data

C12H12N2O M = 200.24 Monoclinic, a = 9.484 (4) Å b = 11.033 (4) Å c = 10.419 (4) Å β = 113.186 (5)° V = 1002.2 (7) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 113 K 0.60 × 0.60 × 0.27 mm

Data collection

Rigaku AFC10/Saturn 724-Plus diffractometer 7662 measured reflections 2234 independent reflections 1872 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.099 S = 1.00 2234 reflections 136 parameters H-atom parameters constrained Δρmax = 0.30 e Å−3 Δρmin = −0.16 e Å−3 Data collection: CrystalClear (Rigaku, 2008 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810012936/ci5062sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810012936/ci5062Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H12N2OF(000) = 424
Mr = 200.24Dx = 1.327 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
a = 9.484 (4) ÅCell parameters from 2956 reflections
b = 11.033 (4) Åθ = 3.1–27.5°
c = 10.419 (4) ŵ = 0.09 mm1
β = 113.186 (5)°T = 113 K
V = 1002.2 (7) Å3Prism, colourless
Z = 40.60 × 0.60 × 0.27 mm
Rigaku AFC10/Saturn 724-Plus diffractometer1872 reflections with I > 2σ(I)
Radiation source: rotating anodeRint = 0.029
graphiteθmax = 27.5°, θmin = 3.1°
Detector resolution: 28.5714 pixels mm-1h = −12→12
φ and ω scansk = −14→11
7662 measured reflectionsl = −12→12
2234 independent reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.099H-atom parameters constrained
S = 1.00w = 1/[σ2(Fo2) + (0.0456P)2 + 0.36P] where P = (Fo2 + 2Fc2)/3
2234 reflections(Δ/σ)max = 0.001
136 parametersΔρmax = 0.30 e Å3
0 restraintsΔρmin = −0.16 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.53098 (12)0.21116 (9)−0.00129 (10)0.0272 (3)
N10.81838 (14)0.46062 (12)1.07793 (13)0.0275 (3)
N20.58259 (13)0.37004 (10)0.38573 (11)0.0186 (3)
C10.74599 (15)0.47583 (12)0.59326 (14)0.0178 (3)
H10.79330.51920.54210.021*
C20.79050 (15)0.49646 (12)0.73352 (14)0.0186 (3)
H20.86790.55470.77880.022*
C30.72270 (15)0.43219 (12)0.81086 (14)0.0177 (3)
C40.60810 (15)0.34638 (12)0.74350 (14)0.0183 (3)
H40.56240.30220.79540.022*
C50.56183 (15)0.32601 (12)0.60278 (14)0.0178 (3)
H50.48350.26830.55770.021*
C60.62984 (14)0.39026 (12)0.52463 (13)0.0165 (3)
C70.49702 (15)0.26581 (12)0.30534 (14)0.0178 (3)
H7A0.38420.27510.27020.021*
H7B0.53030.18710.35340.021*
C80.56407 (14)0.29329 (12)0.19522 (14)0.0167 (3)
C90.65782 (15)0.39702 (12)0.28976 (13)0.0177 (3)
H9A0.76990.38270.33020.021*
H9B0.63310.47820.24610.021*
C100.45979 (16)0.31151 (12)0.04116 (14)0.0204 (3)
H10A0.34990.29790.02080.024*
H10B0.47490.39070.00370.024*
C110.63751 (16)0.19237 (13)0.14221 (14)0.0226 (3)
H11A0.74550.20920.15750.027*
H11B0.62810.11140.17900.027*
C120.77569 (15)0.44870 (12)0.95891 (15)0.0202 (3)
U11U22U33U12U13U23
O10.0353 (6)0.0266 (6)0.0202 (5)0.0027 (5)0.0113 (5)−0.0041 (4)
N10.0257 (7)0.0323 (7)0.0231 (7)−0.0015 (5)0.0082 (5)−0.0038 (6)
N20.0203 (6)0.0187 (6)0.0180 (6)−0.0073 (4)0.0086 (5)−0.0027 (5)
C10.0179 (6)0.0147 (6)0.0217 (7)−0.0007 (5)0.0086 (5)0.0028 (5)
C20.0156 (6)0.0151 (6)0.0223 (7)0.0007 (5)0.0043 (5)−0.0017 (5)
C30.0165 (6)0.0176 (6)0.0177 (7)0.0041 (5)0.0054 (5)−0.0004 (5)
C40.0177 (6)0.0181 (6)0.0212 (7)0.0025 (5)0.0098 (5)0.0022 (5)
C50.0157 (6)0.0163 (6)0.0212 (7)−0.0017 (5)0.0069 (5)−0.0012 (5)
C60.0151 (6)0.0147 (6)0.0188 (7)0.0023 (5)0.0058 (5)0.0008 (5)
C70.0184 (6)0.0157 (6)0.0195 (7)−0.0029 (5)0.0076 (5)−0.0014 (5)
C80.0161 (6)0.0149 (6)0.0193 (7)0.0004 (5)0.0071 (5)0.0002 (5)
C90.0171 (6)0.0186 (6)0.0172 (6)−0.0020 (5)0.0065 (5)0.0004 (5)
C100.0210 (7)0.0184 (6)0.0195 (7)−0.0010 (5)0.0057 (5)−0.0002 (6)
C110.0257 (7)0.0215 (7)0.0227 (7)0.0046 (6)0.0117 (6)0.0016 (6)
C120.0175 (6)0.0195 (6)0.0235 (8)0.0024 (5)0.0079 (5)−0.0010 (6)
O1—C111.4525 (17)C5—C61.4125 (19)
O1—C101.4534 (17)C5—H50.95
N1—C121.1504 (18)C7—C81.5451 (18)
N2—C61.3544 (17)C7—H7A0.99
N2—C71.4653 (17)C7—H7B0.99
N2—C91.4695 (17)C8—C111.5274 (18)
C1—C21.3711 (19)C8—C101.5314 (18)
C1—C61.4127 (18)C8—C91.5431 (18)
C1—H10.95C9—H9A0.99
C2—C31.4049 (19)C9—H9B0.99
C2—H20.95C10—H10A0.99
C3—C41.4034 (19)C10—H10B0.99
C3—C121.4335 (19)C11—H11A0.99
C4—C51.3734 (19)C11—H11B0.99
C4—H40.95
C11—O1—C1090.79 (9)H7A—C7—H7B111.1
C6—N2—C7128.02 (11)C11—C8—C1085.12 (10)
C6—N2—C9130.44 (11)C11—C8—C9122.78 (11)
C7—N2—C994.47 (10)C10—C8—C9122.94 (11)
C2—C1—C6120.13 (12)C11—C8—C7120.34 (11)
C2—C1—H1119.9C10—C8—C7121.30 (11)
C6—C1—H1119.9C9—C8—C788.49 (10)
C1—C2—C3120.61 (12)N2—C9—C888.40 (10)
C1—C2—H2119.7N2—C9—H9A113.9
C3—C2—H2119.7C8—C9—H9A113.9
C4—C3—C2119.53 (12)N2—C9—H9B113.9
C4—C3—C12119.89 (12)C8—C9—H9B113.9
C2—C3—C12120.49 (12)H9A—C9—H9B111.1
C5—C4—C3120.22 (12)O1—C10—C891.91 (10)
C5—C4—H4119.9O1—C10—H10A113.3
C3—C4—H4119.9C8—C10—H10A113.3
C4—C5—C6120.45 (12)O1—C10—H10B113.3
C4—C5—H5119.8C8—C10—H10B113.3
C6—C5—H5119.8H10A—C10—H10B110.6
N2—C6—C5119.95 (12)O1—C11—C892.11 (10)
N2—C6—C1121.00 (12)O1—C11—H11A113.3
C5—C6—C1119.05 (12)C8—C11—H11A113.3
N2—C7—C888.47 (10)O1—C11—H11B113.3
N2—C7—H7A113.9C8—C11—H11B113.3
C8—C7—H7A113.9H11A—C11—H11B110.6
N2—C7—H7B113.9N1—C12—C3179.26 (15)
C8—C7—H7B113.9
C6—C1—C2—C30.67 (19)N2—C7—C8—C11130.78 (12)
C1—C2—C3—C4−0.17 (18)N2—C7—C8—C10−125.31 (12)
C1—C2—C3—C12176.30 (12)N2—C7—C8—C93.04 (9)
C2—C3—C4—C5−0.45 (19)C6—N2—C9—C8154.66 (13)
C12—C3—C4—C5−176.95 (12)C7—N2—C9—C83.21 (10)
C3—C4—C5—C60.57 (19)C11—C8—C9—N2−128.76 (12)
C7—N2—C6—C5−18.4 (2)C10—C8—C9—N2123.99 (12)
C9—N2—C6—C5−161.23 (13)C7—C8—C9—N2−3.04 (9)
C7—N2—C6—C1162.08 (12)C11—O1—C10—C8−2.22 (10)
C9—N2—C6—C119.3 (2)C11—C8—C10—O12.12 (10)
C4—C5—C6—N2−179.56 (12)C9—C8—C10—O1128.42 (12)
C4—C5—C6—C1−0.07 (19)C7—C8—C10—O1−120.66 (12)
C2—C1—C6—N2178.93 (12)C10—O1—C11—C82.22 (10)
C2—C1—C6—C5−0.55 (19)C10—C8—C11—O1−2.12 (10)
C6—N2—C7—C8−155.71 (13)C9—C8—C11—O1−128.56 (12)
C9—N2—C7—C8−3.21 (10)C7—C8—C11—O1121.54 (12)
D—H···AD—HH···AD···AD—H···A
C4—H4···O1i0.952.473.371 (2)159
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C4—H4⋯O1i0.952.473.371 (2)159

Symmetry code: (i) .

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