| Literature DB >> 21579171 |
Suchada Chantrapromma, Jutatip Jeerapong, Thongchai Kruahong, Surat Laphookhieo, Hoong-Kun Fun.
Abstract
The title compound, C(16)H(16)O(4), a dihydro-chalcone, was isolated from the rhizomes of Etlingera littoralis. The mol-ecule is twisted with a dihedral angle of 71.69 (6)° between the two aromatic rings. The propanone unit makes dihedral angles of 4.07 (6) and 73.56 (7)°, respectively, with the 2,6-dihydroxy-4-methoxyphenyl and phenyl rings. The meth-oxy group is approximately coplanar with the attached benzene ring with a dihedral angle of 1.74 (10)°. An intra-molecular O-H⋯O hydrogen bond generates an S(6) ring motif. In the crystal, inter-molecular O-H⋯O hydrogen bonds link the mol-ecules into chains along [201]. A π-π inter-action with a centroid-centroid distance of 3.5185 (6) Å is also observed.Entities:
Year: 2010 PMID: 21579171 PMCID: PMC2979227 DOI: 10.1107/S1600536810013590
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C16H16O4 | |
| Monoclinic, | Melting point: 443 K |
| Hall symbol: C -2yc | Mo |
| Cell parameters from 3044 reflections | |
| θ = 2.7–35.0° | |
| µ = 0.09 mm−1 | |
| β = 107.267 (2)° | |
| Block, yellow | |
| 0.46 × 0.34 × 0.18 mm |
| Bruker APEX DUO CCD area-detector diffractometer | 3044 independent reflections |
| Radiation source: sealed tube | 2940 reflections with |
| graphite | |
| φ and ω scans | θmax = 35.0°, θmin = 2.7° |
| Absorption correction: multi-scan ( | |
| 17744 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3044 reflections | (Δ/σ)max = 0.001 |
| 186 parameters | Δρmax = 0.34 e Å−3 |
| 2 restraints | Δρmin = −0.40 e Å−3 |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| O1 | 0.57929 (10) | 0.09273 (3) | 0.16110 (12) | 0.01772 (14) | |
| O2 | 0.40256 (10) | 0.02283 (2) | 0.09183 (12) | 0.01659 (14) | |
| H1O2 | 0.4212 | 0.0494 | 0.0997 | 0.025* | |
| O3 | 0.76008 (12) | −0.11076 (2) | 0.22402 (13) | 0.01827 (13) | |
| O4 | 1.09458 (10) | 0.02313 (2) | 0.35682 (12) | 0.01540 (13) | |
| H1O4 | 1.186 (4) | 0.0088 (8) | 0.419 (4) | 0.043 (6)* | |
| C1 | 0.57479 (11) | 0.00170 (3) | 0.15654 (13) | 0.01230 (14) | |
| C2 | 0.56979 (13) | −0.04392 (3) | 0.15433 (14) | 0.01400 (15) | |
| H2A | 0.4524 | −0.0589 | 0.1102 | 0.017* | |
| C3 | 0.74533 (14) | −0.06642 (3) | 0.21997 (15) | 0.01307 (13) | |
| C4 | 0.92225 (13) | −0.04409 (3) | 0.28721 (14) | 0.01272 (14) | |
| H4A | 1.0381 | −0.0597 | 0.3298 | 0.015* | |
| C5 | 0.92521 (11) | 0.00137 (3) | 0.29051 (12) | 0.01140 (13) | |
| C6 | 0.75073 (14) | 0.02604 (3) | 0.22318 (15) | 0.01112 (13) | |
| C7 | 0.74075 (13) | 0.07385 (3) | 0.21838 (14) | 0.01271 (13) | |
| C8 | 0.91965 (13) | 0.10221 (3) | 0.27702 (14) | 0.01421 (14) | |
| H8A | 1.0023 | 0.0936 | 0.1911 | 0.017* | |
| H8B | 0.9911 | 0.0971 | 0.4255 | 0.017* | |
| C9 | 0.87479 (16) | 0.15107 (3) | 0.24454 (17) | 0.01880 (16) | |
| H9A | 0.7893 | 0.1559 | 0.1013 | 0.023* | |
| H9B | 0.8081 | 0.1608 | 0.3448 | 0.023* | |
| C10 | 1.05757 (16) | 0.17743 (3) | 0.27659 (18) | 0.01983 (18) | |
| C11 | 1.1302 (2) | 0.20381 (4) | 0.4562 (2) | 0.0303 (2) | |
| H11A | 1.0662 | 0.2049 | 0.5601 | 0.036* | |
| C12 | 1.2988 (3) | 0.22868 (4) | 0.4815 (3) | 0.0440 (4) | |
| H12A | 1.3455 | 0.2463 | 0.6013 | 0.053* | |
| C13 | 1.3961 (2) | 0.22708 (5) | 0.3287 (3) | 0.0453 (4) | |
| H13A | 1.5074 | 0.2438 | 0.3455 | 0.054* | |
| C14 | 1.3276 (2) | 0.20066 (5) | 0.1517 (3) | 0.0396 (3) | |
| H14A | 1.3938 | 0.1992 | 0.0499 | 0.048* | |
| C15 | 1.15876 (19) | 0.17616 (4) | 0.1255 (2) | 0.0273 (2) | |
| H15A | 1.1128 | 0.1587 | 0.0049 | 0.033* | |
| C16 | 0.58350 (17) | −0.13568 (3) | 0.16199 (18) | 0.0230 (2) | |
| H16A | 0.6136 | −0.1664 | 0.1775 | 0.034* | |
| H16B | 0.5142 | −0.1294 | 0.0157 | 0.034* | |
| H16C | 0.5046 | −0.1279 | 0.2513 | 0.034* |
| O1 | 0.0124 (3) | 0.0166 (3) | 0.0227 (3) | 0.0027 (2) | 0.0030 (2) | 0.0000 (3) |
| O2 | 0.0085 (3) | 0.0182 (3) | 0.0212 (3) | 0.0004 (2) | 0.0016 (2) | −0.0017 (2) |
| O3 | 0.0201 (3) | 0.0120 (3) | 0.0216 (3) | −0.0026 (2) | 0.0044 (2) | −0.0005 (2) |
| O4 | 0.0072 (2) | 0.0147 (3) | 0.0221 (3) | −0.0008 (2) | 0.0010 (2) | 0.0007 (2) |
| C1 | 0.0087 (3) | 0.0161 (3) | 0.0118 (3) | −0.0003 (3) | 0.0025 (2) | −0.0004 (3) |
| C2 | 0.0119 (3) | 0.0157 (3) | 0.0139 (3) | −0.0030 (3) | 0.0030 (3) | −0.0011 (3) |
| C3 | 0.0144 (3) | 0.0129 (3) | 0.0116 (3) | −0.0014 (3) | 0.0034 (2) | −0.0004 (3) |
| C4 | 0.0111 (3) | 0.0132 (3) | 0.0134 (3) | 0.0002 (3) | 0.0029 (2) | 0.0002 (3) |
| C5 | 0.0089 (3) | 0.0135 (3) | 0.0114 (3) | −0.0005 (3) | 0.0025 (2) | 0.0002 (3) |
| C6 | 0.0087 (3) | 0.0128 (3) | 0.0114 (3) | −0.0007 (3) | 0.0022 (2) | −0.0004 (3) |
| C7 | 0.0117 (3) | 0.0137 (3) | 0.0124 (3) | 0.0003 (3) | 0.0032 (2) | −0.0002 (3) |
| C8 | 0.0130 (3) | 0.0125 (3) | 0.0161 (3) | −0.0013 (3) | 0.0028 (3) | −0.0007 (3) |
| C9 | 0.0179 (4) | 0.0126 (3) | 0.0242 (4) | 0.0011 (3) | 0.0036 (3) | −0.0009 (3) |
| C10 | 0.0203 (4) | 0.0112 (3) | 0.0232 (4) | −0.0016 (3) | −0.0010 (3) | 0.0012 (3) |
| C11 | 0.0361 (6) | 0.0168 (4) | 0.0293 (5) | −0.0027 (4) | −0.0035 (4) | −0.0040 (4) |
| C12 | 0.0459 (8) | 0.0190 (5) | 0.0472 (8) | −0.0115 (5) | −0.0170 (6) | 0.0002 (5) |
| C13 | 0.0297 (6) | 0.0271 (6) | 0.0637 (10) | −0.0136 (5) | −0.0098 (6) | 0.0190 (6) |
| C14 | 0.0266 (5) | 0.0360 (7) | 0.0532 (8) | −0.0074 (5) | 0.0073 (6) | 0.0202 (6) |
| C15 | 0.0251 (5) | 0.0238 (5) | 0.0308 (5) | −0.0043 (4) | 0.0052 (4) | 0.0054 (4) |
| C16 | 0.0263 (5) | 0.0178 (4) | 0.0227 (4) | −0.0090 (4) | 0.0040 (4) | −0.0014 (3) |
| O1—C7 | 1.2531 (11) | C8—H8B | 0.9700 |
| O2—C1 | 1.3516 (11) | C9—C10 | 1.5052 (14) |
| O2—H1O2 | 0.8200 | C9—H9A | 0.9700 |
| O3—C3 | 1.3574 (11) | C9—H9B | 0.9700 |
| O3—C16 | 1.4349 (13) | C10—C11 | 1.3943 (15) |
| O4—C5 | 1.3445 (10) | C10—C15 | 1.3951 (17) |
| O4—H1O4 | 0.79 (3) | C11—C12 | 1.401 (2) |
| C1—C2 | 1.3928 (13) | C11—H11A | 0.9300 |
| C1—C6 | 1.4230 (12) | C12—C13 | 1.384 (3) |
| C2—C3 | 1.3917 (14) | C12—H12A | 0.9300 |
| C2—H2A | 0.9300 | C13—C14 | 1.379 (3) |
| C3—C4 | 1.3978 (13) | C13—H13A | 0.9300 |
| C4—C5 | 1.3877 (12) | C14—C15 | 1.3956 (18) |
| C4—H4A | 0.9300 | C14—H14A | 0.9300 |
| C5—C6 | 1.4201 (12) | C15—H15A | 0.9300 |
| C6—C7 | 1.4607 (11) | C16—H16A | 0.9600 |
| C7—C8 | 1.5061 (13) | C16—H16B | 0.9600 |
| C8—C9 | 1.5276 (13) | C16—H16C | 0.9600 |
| C8—H8A | 0.9700 | ||
| C1—O2—H1O2 | 109.5 | C10—C9—C8 | 111.21 (8) |
| C3—O3—C16 | 117.72 (9) | C10—C9—H9A | 109.4 |
| C5—O4—H1O4 | 115.4 (18) | C8—C9—H9A | 109.4 |
| O2—C1—C2 | 117.08 (8) | C10—C9—H9B | 109.4 |
| O2—C1—C6 | 120.02 (8) | C8—C9—H9B | 109.4 |
| C2—C1—C6 | 122.90 (8) | H9A—C9—H9B | 108.0 |
| C3—C2—C1 | 118.14 (8) | C11—C10—C15 | 118.14 (11) |
| C3—C2—H2A | 120.9 | C11—C10—C9 | 121.36 (11) |
| C1—C2—H2A | 120.9 | C15—C10—C9 | 120.50 (9) |
| O3—C3—C2 | 123.84 (9) | C10—C11—C12 | 120.52 (15) |
| O3—C3—C4 | 114.90 (9) | C10—C11—H11A | 119.7 |
| C2—C3—C4 | 121.26 (7) | C12—C11—H11A | 119.7 |
| C5—C4—C3 | 120.05 (8) | C13—C12—C11 | 120.27 (14) |
| C5—C4—H4A | 120.0 | C13—C12—H12A | 119.9 |
| C3—C4—H4A | 120.0 | C11—C12—H12A | 119.9 |
| O4—C5—C4 | 120.48 (8) | C14—C13—C12 | 119.88 (13) |
| O4—C5—C6 | 118.37 (7) | C14—C13—H13A | 120.1 |
| C4—C5—C6 | 121.15 (8) | C12—C13—H13A | 120.1 |
| C5—C6—C1 | 116.50 (7) | C13—C14—C15 | 119.88 (16) |
| C5—C6—C7 | 124.74 (8) | C13—C14—H14A | 120.1 |
| C1—C6—C7 | 118.76 (8) | C15—C14—H14A | 120.1 |
| O1—C7—C6 | 120.09 (8) | C10—C15—C14 | 121.29 (13) |
| O1—C7—C8 | 117.52 (7) | C10—C15—H15A | 119.4 |
| C6—C7—C8 | 122.38 (8) | C14—C15—H15A | 119.4 |
| C7—C8—C9 | 113.30 (7) | O3—C16—H16A | 109.5 |
| C7—C8—H8A | 108.9 | O3—C16—H16B | 109.5 |
| C9—C8—H8A | 108.9 | H16A—C16—H16B | 109.5 |
| C7—C8—H8B | 108.9 | O3—C16—H16C | 109.5 |
| C9—C8—H8B | 108.9 | H16A—C16—H16C | 109.5 |
| H8A—C8—H8B | 107.7 | H16B—C16—H16C | 109.5 |
| O2—C1—C2—C3 | 179.91 (8) | C5—C6—C7—O1 | −178.29 (8) |
| C6—C1—C2—C3 | −0.16 (14) | C1—C6—C7—O1 | 1.64 (14) |
| C16—O3—C3—C2 | −1.66 (15) | C5—C6—C7—C8 | 2.74 (15) |
| C16—O3—C3—C4 | 178.47 (8) | C1—C6—C7—C8 | −177.33 (8) |
| C1—C2—C3—O3 | −179.62 (8) | O1—C7—C8—C9 | −3.30 (12) |
| C1—C2—C3—C4 | 0.24 (14) | C6—C7—C8—C9 | 175.70 (8) |
| O3—C3—C4—C5 | −179.79 (8) | C7—C8—C9—C10 | −172.32 (8) |
| C2—C3—C4—C5 | 0.34 (14) | C8—C9—C10—C11 | −108.05 (11) |
| C3—C4—C5—O4 | 179.38 (7) | C8—C9—C10—C15 | 72.21 (12) |
| C3—C4—C5—C6 | −1.01 (14) | C15—C10—C11—C12 | 0.83 (17) |
| O4—C5—C6—C1 | −179.33 (7) | C9—C10—C11—C12 | −178.92 (11) |
| C4—C5—C6—C1 | 1.05 (13) | C10—C11—C12—C13 | −0.5 (2) |
| O4—C5—C6—C7 | 0.60 (14) | C11—C12—C13—C14 | −0.4 (2) |
| C4—C5—C6—C7 | −179.02 (8) | C12—C13—C14—C15 | 1.0 (2) |
| O2—C1—C6—C5 | 179.46 (8) | C11—C10—C15—C14 | −0.27 (17) |
| C2—C1—C6—C5 | −0.46 (14) | C9—C10—C15—C14 | 179.47 (11) |
| O2—C1—C6—C7 | −0.47 (13) | C13—C14—C15—C10 | −0.6 (2) |
| C2—C1—C6—C7 | 179.60 (8) |
| H··· | ||||
| O2—H1O2···O1 | 0.82 | 1.71 | 2.4576 (11) | 150 |
| O4—H1O4···O2i | 0.80 (3) | 1.90 (3) | 2.6920 (10) | 175 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O2—H1 | 0.82 | 1.71 | 2.4576 (11) | 150 |
| O4—H1 | 0.80 (3) | 1.90 (3) | 2.6920 (10) | 175 (3) |
Symmetry code: (i) .