Literature DB >> 21579164

1-Benzoyl-4-(2-nitro-phen-yl)semicarbazide.

Ting Sun1, Gong-Chun Li, Jing Li, Feng-Ling Yang.   

Abstract

The title compound, C(14)H(12)N(4)O(4), was prepared by the reaction of n class="Chemical">2-nitro-phenyl isocyanate with benzoyl-hydrazine. The dihedral angle between the rings is 71.49 (6)) Å. The mol-ecular conformation is stabilized by an intra-molecular N-H⋯O hydrogen bond, generating an S(6) ring. The crystal packing shows N-H⋯O hydrogen bonds.

Entities:  

Year:  2010        PMID: 21579164      PMCID: PMC2979154          DOI: 10.1107/S1600536810013048

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the bioactivity of urea derivatives, see: Yip et al. (1986 ▶); Liu et al. (2005 ▶).

Experimental

Crystal data

C14H12N4O4 M = 300.28 Monoclinic, a = 4.655 (2) Å b = 15.020 (7) Å c = 10.005 (5) Å β = 97.954 (7)° V = 692.9 (5) Å3 Z = 2 Mo Kα radiation μ = 0.11 mm−1 T = 113 K 0.20 × 0.16 × 0.12 mm

Data collection

Rigaku Saturn 724 CCD area-detector diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005 ▶) T min = 0.979, T max = 0.987 5816 measured reflections 1652 independent reflections 1383 reflections with I > 2σ(I) R int = 0.033

Refinement

R[F 2 > 2σ(F 2)] = 0.028 wR(F 2) = 0.059 S = 0.96 1652 reflections 212 parameters 2 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.17 e Å−3 Δρmin = −0.16 e Å−3 Data collection: CrystalClear (Rigaku/MSC, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810013048/bt5244sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810013048/bt5244Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H12N4O4F(000) = 312
Mr = 300.28Dx = 1.439 Mg m3
Monoclinic, PcMo Kα radiation, λ = 0.71073 Å
Hall symbol: P -2ycCell parameters from 2582 reflections
a = 4.655 (2) Åθ = 1.4–27.9°
b = 15.020 (7) ŵ = 0.11 mm1
c = 10.005 (5) ÅT = 113 K
β = 97.954 (7)°Prism, colorless
V = 692.9 (5) Å30.20 × 0.16 × 0.12 mm
Z = 2
Rigaku Saturn 724 CCD area-detector diffractometer1652 independent reflections
Radiation source: fine-focus sealed tube1383 reflections with I > 2σ(I)
graphiteRint = 0.033
Detector resolution: 14.68 pixels mm-1θmax = 27.9°, θmin = 1.4°
ω and φ scansh = −4→6
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005)k = −16→19
Tmin = 0.979, Tmax = 0.987l = −13→12
5816 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.028H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.059w = 1/[σ2(Fo2) + (0.0305P)2] where P = (Fo2 + 2Fc2)/3
S = 0.96(Δ/σ)max = 0.007
1652 reflectionsΔρmax = 0.17 e Å3
212 parametersΔρmin = −0.16 e Å3
2 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.044 (4)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.4760 (3)−0.01804 (9)0.99297 (16)0.0318 (4)
O20.4185 (3)0.12193 (9)1.02923 (16)0.0305 (4)
O31.1178 (3)0.32395 (8)0.92954 (15)0.0224 (3)
O40.8286 (3)0.48594 (9)0.76324 (14)0.0256 (3)
N10.6951 (4)0.24346 (11)0.90518 (17)0.0191 (4)
H10.539 (5)0.2410 (13)0.936 (2)0.021 (6)*
N20.6976 (4)0.38858 (10)0.97176 (17)0.0172 (3)
H2A0.523 (5)0.3870 (12)0.958 (2)0.014 (5)*
N30.8310 (3)0.47099 (10)0.98749 (17)0.0183 (3)
H3A0.853 (5)0.4899 (15)1.073 (2)0.031 (6)*
N40.5259 (3)0.06040 (10)0.97133 (17)0.0220 (4)
C10.7987 (3)0.16832 (12)0.8453 (2)0.0169 (4)
C20.7208 (4)0.08059 (13)0.8735 (2)0.0186 (4)
C30.8283 (4)0.00766 (13)0.8095 (2)0.0238 (5)
H30.7730−0.05090.83100.029*
C41.0138 (4)0.02023 (13)0.7156 (2)0.0244 (5)
H41.0907−0.02930.67340.029*
C51.0872 (4)0.10670 (13)0.6832 (2)0.0228 (4)
H51.21080.11600.61650.027*
C60.9833 (4)0.17889 (12)0.7465 (2)0.0181 (4)
H61.03770.23720.72290.022*
C70.8559 (4)0.31947 (12)0.93330 (19)0.0165 (4)
C80.9025 (4)0.51379 (12)0.8784 (2)0.0189 (4)
C91.0848 (4)0.59575 (12)0.9075 (2)0.0202 (4)
C101.2623 (4)0.60775 (13)1.0298 (2)0.0228 (4)
H101.26380.56481.09960.027*
C111.4379 (4)0.68291 (13)1.0494 (2)0.0297 (5)
H111.55980.69101.13280.036*
C121.4367 (5)0.74538 (13)0.9493 (3)0.0337 (5)
H121.55760.79640.96360.040*
C131.2588 (5)0.73400 (15)0.8273 (3)0.0404 (6)
H131.25600.77760.75830.048*
C141.0851 (5)0.65894 (14)0.8064 (2)0.0339 (5)
H140.96560.65070.72240.041*
U11U22U33U12U13U23
O10.0371 (9)0.0231 (8)0.0370 (10)−0.0064 (6)0.0116 (7)0.0067 (7)
O20.0351 (8)0.0255 (8)0.0349 (10)0.0007 (7)0.0189 (7)0.0013 (7)
O30.0137 (6)0.0229 (7)0.0310 (8)−0.0021 (5)0.0050 (5)−0.0033 (6)
O40.0360 (8)0.0254 (7)0.0149 (8)−0.0060 (6)0.0018 (6)−0.0025 (6)
N10.0144 (8)0.0190 (8)0.0256 (10)−0.0022 (6)0.0089 (7)−0.0017 (7)
N20.0137 (8)0.0160 (8)0.0223 (9)−0.0024 (6)0.0036 (6)−0.0027 (7)
N30.0224 (8)0.0174 (8)0.0156 (9)−0.0034 (6)0.0045 (6)−0.0038 (7)
N40.0203 (8)0.0228 (9)0.0224 (10)−0.0023 (7)0.0007 (7)0.0040 (7)
C10.0114 (9)0.0190 (9)0.0196 (11)−0.0001 (7)−0.0002 (7)−0.0003 (8)
C20.0158 (9)0.0210 (9)0.0185 (10)−0.0010 (7)0.0011 (7)0.0002 (8)
C30.0229 (10)0.0180 (9)0.0295 (12)0.0005 (8)0.0002 (8)−0.0009 (8)
C40.0233 (10)0.0219 (10)0.0281 (12)0.0034 (8)0.0038 (8)−0.0063 (9)
C50.0191 (10)0.0281 (11)0.0217 (11)−0.0005 (8)0.0043 (8)−0.0013 (9)
C60.0150 (8)0.0198 (10)0.0199 (11)−0.0006 (7)0.0033 (7)0.0012 (8)
C70.0166 (9)0.0201 (9)0.0130 (10)−0.0006 (7)0.0024 (7)0.0018 (7)
C80.0205 (10)0.0182 (9)0.0181 (10)0.0011 (7)0.0033 (7)−0.0001 (8)
C90.0241 (10)0.0174 (9)0.0201 (10)−0.0005 (8)0.0066 (8)−0.0016 (8)
C100.0245 (10)0.0216 (10)0.0228 (11)−0.0028 (8)0.0055 (8)−0.0010 (8)
C110.0263 (11)0.0307 (11)0.0324 (13)−0.0058 (9)0.0049 (9)−0.0086 (10)
C120.0414 (13)0.0227 (11)0.0395 (15)−0.0104 (9)0.0148 (10)−0.0086 (10)
C130.0603 (16)0.0267 (12)0.0353 (16)−0.0126 (11)0.0107 (12)0.0065 (10)
C140.0503 (13)0.0265 (11)0.0238 (13)−0.0079 (10)0.0012 (10)0.0028 (9)
O1—N41.226 (2)C4—C51.393 (3)
O2—N41.233 (2)C4—H40.9500
O3—C71.227 (2)C5—C61.377 (3)
O4—C81.229 (2)C5—H50.9500
N1—C71.373 (2)C6—H60.9500
N1—C11.395 (2)C8—C91.500 (3)
N1—H10.83 (2)C9—C141.387 (3)
N2—C71.359 (2)C9—C101.390 (3)
N2—N31.384 (2)C10—C111.392 (3)
N2—H2A0.80 (2)C10—H100.9500
N3—C81.348 (3)C11—C121.371 (3)
N3—H3A0.90 (2)C11—H110.9500
N4—C21.456 (3)C12—C131.388 (3)
C1—C61.405 (3)C12—H120.9500
C1—C21.406 (3)C13—C141.386 (3)
C2—C31.396 (3)C13—H130.9500
C3—C41.374 (3)C14—H140.9500
C3—H30.9500
C7—N1—C1123.34 (16)C5—C6—C1121.51 (18)
C7—N1—H1116.3 (14)C5—C6—H6119.2
C1—N1—H1119.8 (14)C1—C6—H6119.2
C7—N2—N3117.57 (16)O3—C7—N2123.16 (16)
C7—N2—H2A120.0 (14)O3—C7—N1123.73 (17)
N3—N2—H2A118.2 (13)N2—C7—N1113.05 (15)
C8—N3—N2119.45 (16)O4—C8—N3121.89 (17)
C8—N3—H3A128.0 (15)O4—C8—C9122.59 (17)
N2—N3—H3A112.5 (15)N3—C8—C9115.49 (17)
O1—N4—O2122.58 (17)C14—C9—C10119.50 (18)
O1—N4—C2118.03 (17)C14—C9—C8118.53 (18)
O2—N4—C2119.39 (15)C10—C9—C8121.90 (17)
N1—C1—C6119.49 (16)C9—C10—C11119.69 (19)
N1—C1—C2123.91 (16)C9—C10—H10120.2
C6—C1—C2116.54 (16)C11—C10—H10120.2
C3—C2—C1121.65 (18)C12—C11—C10120.6 (2)
C3—C2—N4116.19 (16)C12—C11—H11119.7
C1—C2—N4122.16 (16)C10—C11—H11119.7
C4—C3—C2120.32 (19)C11—C12—C13120.0 (2)
C4—C3—H3119.8C11—C12—H12120.0
C2—C3—H3119.8C13—C12—H12120.0
C3—C4—C5119.01 (19)C14—C13—C12119.8 (2)
C3—C4—H4120.5C14—C13—H13120.1
C5—C4—H4120.5C12—C13—H13120.1
C6—C5—C4120.9 (2)C13—C14—C9120.4 (2)
C6—C5—H5119.5C13—C14—H14119.8
C4—C5—H5119.5C9—C14—H14119.8
C7—N2—N3—C867.4 (2)N3—N2—C7—O310.0 (3)
C7—N1—C1—C6−35.8 (3)N3—N2—C7—N1−172.79 (16)
C7—N1—C1—C2146.84 (18)C1—N1—C7—O3−12.5 (3)
N1—C1—C2—C3179.25 (18)C1—N1—C7—N2170.32 (17)
C6—C1—C2—C31.8 (2)N2—N3—C8—O47.0 (3)
N1—C1—C2—N4−1.2 (2)N2—N3—C8—C9−171.28 (16)
C6—C1—C2—N4−178.62 (16)O4—C8—C9—C1423.4 (3)
O1—N4—C2—C31.8 (2)N3—C8—C9—C14−158.26 (18)
O2—N4—C2—C3−178.46 (17)O4—C8—C9—C10−153.41 (19)
O1—N4—C2—C1−177.80 (17)N3—C8—C9—C1024.9 (2)
O2—N4—C2—C12.0 (2)C14—C9—C10—C110.0 (3)
C1—C2—C3—C4−0.4 (3)C8—C9—C10—C11176.84 (17)
N4—C2—C3—C4180.00 (16)C9—C10—C11—C120.2 (3)
C2—C3—C4—C5−1.4 (3)C10—C11—C12—C130.1 (3)
C3—C4—C5—C61.8 (3)C11—C12—C13—C14−0.7 (4)
C4—C5—C6—C1−0.4 (3)C12—C13—C14—C91.0 (4)
N1—C1—C6—C5−178.97 (17)C10—C9—C14—C13−0.6 (3)
C2—C1—C6—C5−1.4 (3)C8—C9—C14—C13−177.6 (2)
D—H···AD—HH···AD···AD—H···A
N2—H2A···O3i0.80 (2)2.10 (2)2.844 (2)154.8 (18)
N3—H3A···O4ii0.90 (2)1.95 (2)2.835 (2)167 (2)
N1—H1···O20.83 (2)2.13 (2)2.640 (2)119.8 (17)
N1—H1···O3i0.83 (2)2.32 (2)2.987 (2)138.7 (19)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2A⋯O3i0.80 (2)2.10 (2)2.844 (2)154.8 (18)
N3—H3A⋯O4ii0.90 (2)1.95 (2)2.835 (2)167 (2)
N1—H1⋯O20.83 (2)2.13 (2)2.640 (2)119.8 (17)
N1—H1⋯O3i0.83 (2)2.32 (2)2.987 (2)138.7 (19)

Symmetry codes: (i) ; (ii) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Effect of thidiazuron, a cytokinin-active urea derivative, in cytokinin-dependent ethylene production systems.

Authors:  W K Yip; S F Yang
Journal:  Plant Physiol       Date:  1986-02       Impact factor: 8.340

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.