| Literature DB >> 21579163 |
Grzegorz Dutkiewicz, Anil N Mayekar, H S Yathirajan, B Narayana, Maciej Kubicki.
Abstract
In the title compound, C(19)H(13)F(3)N(2)O·H(2)O, the phenyl and pyrroloquinoline ring system are close to coplanar [dihedral angle = 10.94 (4)°]. The meth-oxy group also is almost coplanar with the phenyl ring [5.4 (1)°]. In the crystal structure N-H⋯O(water) and water-quinoline O-H⋯N hydrogen bonds build up a supra-molecular chain-like arrangement along [001]. The remaining H atom of the water mol-ecule does not take part in classical hydrogen bonds. Instead, this O-H bond points toward the center of the phenyl ring of a neighbouring mol-ecule. Weak C-H⋯O and C-H⋯π inter-actions are also present.Entities:
Year: 2010 PMID: 21579163 PMCID: PMC2979020 DOI: 10.1107/S1600536810013644
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C19H13F3N2O·H2O | |
| Monoclinic, | Cu |
| Hall symbol: -P 2ybc | Cell parameters from 3587 reflections |
| θ = 3.3–75.2° | |
| µ = 0.99 mm−1 | |
| β = 102.743 (8)° | Plate, colourless |
| 0.4 × 0.2 × 0.1 mm | |
| Oxford Diffraction SuperNova (single source at offset) Atlas diffractometer | 3304 independent reflections |
| Radiation source: SuperNova (Cu) X-ray Source | 2767 reflections with |
| mirror | |
| Detector resolution: 5.2679 pixels mm-1 | θmax = 75.3°, θmin = 3.3° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 5601 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| All H-atom parameters refined | |
| (Δ/σ)max = 0.009 | |
| 3304 reflections | Δρmax = 0.19 e Å−3 |
| 296 parameters | Δρmin = −0.21 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0039 (10) |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| N1 | 0.78945 (9) | 0.29250 (19) | 0.16925 (7) | 0.0550 (3) | |
| C2 | 0.88353 (11) | 0.3157 (3) | 0.20243 (8) | 0.0585 (4) | |
| H2 | 0.9306 (14) | 0.344 (3) | 0.1687 (10) | 0.071 (5)* | |
| C3 | 0.92113 (10) | 0.3055 (2) | 0.28263 (8) | 0.0510 (3) | |
| C4 | 0.85387 (10) | 0.26693 (18) | 0.32912 (7) | 0.0439 (3) | |
| C5 | 0.75150 (10) | 0.24194 (18) | 0.29686 (8) | 0.0457 (3) | |
| C6 | 0.67970 (11) | 0.2042 (2) | 0.34033 (9) | 0.0564 (4) | |
| H6 | 0.6994 (13) | 0.196 (3) | 0.3971 (11) | 0.069 (5)* | |
| C7 | 0.58263 (12) | 0.1830 (3) | 0.30423 (10) | 0.0684 (5) | |
| H7 | 0.5303 (15) | 0.158 (3) | 0.3354 (11) | 0.080 (6)* | |
| C8 | 0.55295 (12) | 0.1992 (3) | 0.22380 (10) | 0.0668 (4) | |
| H8 | 0.4799 (16) | 0.183 (3) | 0.1986 (11) | 0.080 (6)* | |
| C9 | 0.62098 (11) | 0.2358 (2) | 0.18026 (9) | 0.0564 (4) | |
| C91 | 0.58623 (13) | 0.2559 (3) | 0.09412 (11) | 0.0790 (6) | |
| F91A | 0.48893 (9) | 0.2321 (3) | 0.07127 (7) | 0.1234 (6) | |
| F91B | 0.62834 (10) | 0.1319 (2) | 0.05506 (7) | 0.1118 (5) | |
| F91C | 0.60642 (9) | 0.4282 (2) | 0.06897 (7) | 0.1051 (5) | |
| C10 | 0.72299 (10) | 0.25735 (19) | 0.21521 (8) | 0.0474 (3) | |
| N11 | 0.90552 (8) | 0.26236 (16) | 0.40374 (6) | 0.0451 (3) | |
| H11 | 0.8790 (14) | 0.233 (2) | 0.4455 (11) | 0.065 (5)* | |
| C12 | 1.00454 (10) | 0.2982 (2) | 0.40618 (8) | 0.0472 (3) | |
| C13 | 1.01616 (10) | 0.3251 (2) | 0.33251 (8) | 0.0560 (4) | |
| H13 | 1.0773 (14) | 0.354 (3) | 0.3175 (10) | 0.073 (5)* | |
| C14 | 1.07851 (10) | 0.30124 (19) | 0.47970 (8) | 0.0469 (3) | |
| C15 | 1.17510 (10) | 0.3653 (2) | 0.48185 (9) | 0.0557 (4) | |
| H15 | 1.1925 (12) | 0.408 (3) | 0.4342 (10) | 0.067 (5)* | |
| C16 | 1.24628 (11) | 0.3636 (2) | 0.54972 (9) | 0.0590 (4) | |
| H16 | 1.3115 (14) | 0.409 (3) | 0.5519 (10) | 0.072 (5)* | |
| C17 | 1.22347 (10) | 0.3006 (2) | 0.61766 (8) | 0.0528 (3) | |
| C18 | 1.12861 (11) | 0.2388 (2) | 0.61730 (9) | 0.0547 (4) | |
| H18 | 1.1117 (13) | 0.195 (2) | 0.6656 (11) | 0.064 (5)* | |
| C19 | 1.05731 (10) | 0.2390 (2) | 0.54829 (8) | 0.0525 (3) | |
| H19 | 0.9913 (14) | 0.193 (2) | 0.5499 (10) | 0.064 (5)* | |
| O20 | 1.29904 (8) | 0.30707 (18) | 0.68177 (6) | 0.0660 (3) | |
| C21 | 1.27720 (15) | 0.2604 (3) | 0.75398 (10) | 0.0669 (5) | |
| H21A | 1.3371 (18) | 0.280 (3) | 0.7903 (13) | 0.090 (7)* | |
| H21B | 1.2269 (17) | 0.345 (3) | 0.7653 (12) | 0.089 (6)* | |
| H21C | 1.2575 (14) | 0.133 (3) | 0.7546 (11) | 0.078 (6)* | |
| O1W | 0.81044 (9) | 0.12279 (19) | 0.51922 (6) | 0.0610 (3) | |
| H1W1 | 0.7916 (17) | 0.165 (3) | 0.5623 (13) | 0.092 (7)* | |
| H1W2 | 0.802 (2) | 0.008 (4) | 0.5170 (15) | 0.121 (10)* |
| N1 | 0.0483 (6) | 0.0776 (8) | 0.0393 (6) | 0.0045 (6) | 0.0100 (5) | −0.0023 (5) |
| C2 | 0.0472 (7) | 0.0893 (11) | 0.0408 (7) | 0.0035 (7) | 0.0132 (6) | 0.0002 (7) |
| C3 | 0.0445 (7) | 0.0674 (8) | 0.0416 (7) | 0.0037 (6) | 0.0105 (5) | −0.0016 (6) |
| C4 | 0.0430 (7) | 0.0504 (7) | 0.0378 (6) | 0.0029 (5) | 0.0077 (5) | −0.0014 (5) |
| C5 | 0.0448 (7) | 0.0500 (7) | 0.0414 (7) | 0.0012 (5) | 0.0076 (5) | −0.0008 (5) |
| C6 | 0.0491 (8) | 0.0735 (9) | 0.0463 (7) | −0.0054 (7) | 0.0100 (6) | 0.0035 (7) |
| C7 | 0.0489 (8) | 0.0975 (12) | 0.0597 (9) | −0.0095 (8) | 0.0143 (7) | 0.0046 (9) |
| C8 | 0.0443 (8) | 0.0930 (12) | 0.0600 (9) | −0.0049 (8) | 0.0046 (7) | −0.0004 (8) |
| C9 | 0.0463 (8) | 0.0711 (9) | 0.0487 (8) | 0.0016 (6) | 0.0043 (6) | −0.0033 (6) |
| C91 | 0.0496 (9) | 0.1272 (17) | 0.0557 (10) | −0.0007 (10) | 0.0016 (7) | −0.0078 (10) |
| F91A | 0.0517 (6) | 0.2442 (19) | 0.0643 (7) | −0.0149 (8) | −0.0089 (5) | 0.0008 (8) |
| F91B | 0.0891 (8) | 0.1757 (14) | 0.0664 (6) | −0.0034 (8) | 0.0080 (6) | −0.0496 (8) |
| F91C | 0.0881 (8) | 0.1500 (12) | 0.0710 (7) | 0.0129 (8) | 0.0040 (6) | 0.0398 (8) |
| C10 | 0.0460 (7) | 0.0539 (7) | 0.0415 (7) | 0.0029 (5) | 0.0080 (6) | −0.0027 (5) |
| N11 | 0.0421 (6) | 0.0557 (6) | 0.0369 (5) | 0.0007 (4) | 0.0074 (4) | 0.0000 (4) |
| C12 | 0.0403 (6) | 0.0557 (7) | 0.0446 (7) | 0.0039 (5) | 0.0068 (5) | −0.0019 (5) |
| C13 | 0.0410 (7) | 0.0829 (10) | 0.0446 (7) | 0.0022 (7) | 0.0108 (6) | 0.0002 (7) |
| C14 | 0.0412 (7) | 0.0537 (7) | 0.0444 (7) | 0.0042 (5) | 0.0061 (5) | −0.0023 (5) |
| C15 | 0.0445 (7) | 0.0705 (9) | 0.0514 (8) | −0.0003 (6) | 0.0090 (6) | 0.0010 (7) |
| C16 | 0.0412 (7) | 0.0743 (10) | 0.0596 (8) | −0.0019 (7) | 0.0069 (6) | −0.0005 (7) |
| C17 | 0.0430 (7) | 0.0580 (8) | 0.0515 (7) | 0.0063 (6) | −0.0022 (6) | −0.0032 (6) |
| C18 | 0.0495 (8) | 0.0667 (9) | 0.0457 (8) | 0.0007 (6) | 0.0054 (6) | 0.0027 (6) |
| C19 | 0.0415 (7) | 0.0682 (9) | 0.0459 (7) | −0.0012 (6) | 0.0057 (6) | −0.0004 (6) |
| O20 | 0.0488 (6) | 0.0855 (8) | 0.0553 (6) | 0.0016 (5) | −0.0065 (5) | −0.0003 (5) |
| C21 | 0.0688 (11) | 0.0694 (11) | 0.0532 (9) | 0.0023 (8) | −0.0063 (8) | −0.0012 (8) |
| O1W | 0.0696 (7) | 0.0718 (8) | 0.0449 (5) | −0.0025 (6) | 0.0199 (5) | 0.0002 (5) |
| N1—C2 | 1.3155 (19) | N11—H11 | 0.92 (2) |
| N1—C10 | 1.3800 (18) | C12—C13 | 1.3662 (19) |
| C2—C3 | 1.4061 (19) | C12—C14 | 1.4707 (18) |
| C2—H2 | 1.00 (2) | C13—H13 | 0.96 (2) |
| C3—C4 | 1.4004 (19) | C14—C19 | 1.385 (2) |
| C3—C13 | 1.4210 (19) | C14—C15 | 1.403 (2) |
| C4—N11 | 1.3601 (17) | C15—C16 | 1.378 (2) |
| C4—C5 | 1.4170 (19) | C15—H15 | 0.977 (18) |
| C5—C6 | 1.411 (2) | C16—C17 | 1.386 (2) |
| C5—C10 | 1.4202 (19) | C16—H16 | 0.950 (19) |
| C6—C7 | 1.363 (2) | C17—O20 | 1.3663 (16) |
| C6—H6 | 0.987 (19) | C17—C18 | 1.382 (2) |
| C7—C8 | 1.401 (2) | C18—C19 | 1.394 (2) |
| C7—H7 | 1.02 (2) | C18—H18 | 0.988 (19) |
| C8—C9 | 1.368 (2) | C19—H19 | 0.977 (19) |
| C8—H8 | 1.02 (2) | O20—C21 | 1.419 (2) |
| C9—C10 | 1.419 (2) | C21—H21A | 0.94 (2) |
| C9—C91 | 1.506 (2) | C21—H21B | 0.97 (2) |
| C91—F91B | 1.327 (2) | C21—H21C | 0.94 (2) |
| C91—F91A | 1.328 (2) | O1W—H1W1 | 0.91 (2) |
| C91—F91C | 1.344 (3) | O1W—H1W2 | 0.82 (3) |
| N11—C12 | 1.3845 (17) | ||
| C2—N1—C10 | 118.69 (12) | C4—N11—H11 | 124.9 (11) |
| N1—C2—C3 | 123.77 (13) | C12—N11—H11 | 125.7 (11) |
| N1—C2—H2 | 117.9 (10) | C13—C12—N11 | 108.67 (12) |
| C3—C2—H2 | 118.3 (10) | C13—C12—C14 | 129.95 (13) |
| C4—C3—C2 | 117.49 (13) | N11—C12—C14 | 121.38 (12) |
| C4—C3—C13 | 107.18 (12) | C12—C13—C3 | 107.17 (12) |
| C2—C3—C13 | 135.34 (14) | C12—C13—H13 | 126.2 (11) |
| N11—C4—C3 | 107.71 (12) | C3—C13—H13 | 126.6 (11) |
| N11—C4—C5 | 130.89 (12) | C19—C14—C15 | 117.58 (13) |
| C3—C4—C5 | 121.39 (12) | C19—C14—C12 | 122.34 (12) |
| C6—C5—C4 | 124.31 (13) | C15—C14—C12 | 120.07 (13) |
| C6—C5—C10 | 120.15 (13) | C16—C15—C14 | 120.92 (14) |
| C4—C5—C10 | 115.54 (12) | C16—C15—H15 | 119.7 (10) |
| C7—C6—C5 | 120.19 (14) | C14—C15—H15 | 119.4 (10) |
| C7—C6—H6 | 119.7 (11) | C15—C16—C17 | 120.54 (14) |
| C5—C6—H6 | 120.1 (11) | C15—C16—H16 | 121.5 (11) |
| C6—C7—C8 | 120.51 (15) | C17—C16—H16 | 117.9 (11) |
| C6—C7—H7 | 120.5 (11) | O20—C17—C18 | 124.48 (14) |
| C8—C7—H7 | 119.0 (11) | O20—C17—C16 | 115.81 (13) |
| C9—C8—C7 | 120.52 (15) | C18—C17—C16 | 119.70 (13) |
| C9—C8—H8 | 120.9 (12) | C17—C18—C19 | 119.43 (14) |
| C7—C8—H8 | 118.6 (12) | C17—C18—H18 | 120.1 (11) |
| C8—C9—C10 | 121.00 (14) | C19—C18—H18 | 120.5 (11) |
| C8—C9—C91 | 119.11 (14) | C14—C19—C18 | 121.83 (14) |
| C10—C9—C91 | 119.88 (14) | C14—C19—H19 | 120.8 (10) |
| F91B—C91—F91A | 106.84 (17) | C18—C19—H19 | 117.4 (10) |
| F91B—C91—F91C | 105.85 (17) | C17—O20—C21 | 117.95 (13) |
| F91A—C91—F91C | 106.47 (18) | O20—C21—H21A | 104.7 (14) |
| F91B—C91—C9 | 112.99 (17) | O20—C21—H21B | 110.5 (13) |
| F91A—C91—C9 | 111.93 (16) | H21A—C21—H21B | 109.4 (17) |
| F91C—C91—C9 | 112.29 (16) | O20—C21—H21C | 110.6 (12) |
| N1—C10—C5 | 123.12 (13) | H21A—C21—H21C | 110.3 (17) |
| N1—C10—C9 | 119.26 (13) | H21B—C21—H21C | 111.1 (18) |
| C5—C10—C9 | 117.63 (13) | H1W1—O1W—H1W2 | 107 (2) |
| C4—N11—C12 | 109.27 (11) | ||
| C10—N1—C2—C3 | 0.5 (3) | C8—C9—C10—N1 | 179.42 (16) |
| N1—C2—C3—C4 | 0.5 (3) | C91—C9—C10—N1 | −1.4 (2) |
| N1—C2—C3—C13 | −179.65 (17) | C8—C9—C10—C5 | −0.8 (2) |
| C2—C3—C4—N11 | 179.62 (13) | C91—C9—C10—C5 | 178.39 (15) |
| C13—C3—C4—N11 | −0.26 (16) | C3—C4—N11—C12 | 0.29 (15) |
| C2—C3—C4—C5 | −1.0 (2) | C5—C4—N11—C12 | −179.04 (13) |
| C13—C3—C4—C5 | 179.15 (13) | C4—N11—C12—C13 | −0.21 (16) |
| N11—C4—C5—C6 | −0.2 (2) | C4—N11—C12—C14 | −179.70 (12) |
| C3—C4—C5—C6 | −179.49 (14) | N11—C12—C13—C3 | 0.05 (17) |
| N11—C4—C5—C10 | 179.70 (13) | C14—C12—C13—C3 | 179.47 (14) |
| C3—C4—C5—C10 | 0.45 (19) | C4—C3—C13—C12 | 0.12 (17) |
| C4—C5—C6—C7 | 179.73 (15) | C2—C3—C13—C12 | −179.72 (18) |
| C10—C5—C6—C7 | −0.2 (2) | C13—C12—C14—C19 | −168.59 (16) |
| C5—C6—C7—C8 | −0.3 (3) | N11—C12—C14—C19 | 10.8 (2) |
| C6—C7—C8—C9 | 0.2 (3) | C13—C12—C14—C15 | 10.1 (2) |
| C7—C8—C9—C10 | 0.3 (3) | N11—C12—C14—C15 | −170.52 (13) |
| C7—C8—C9—C91 | −178.87 (18) | C19—C14—C15—C16 | 0.8 (2) |
| C8—C9—C91—F91B | −121.27 (19) | C12—C14—C15—C16 | −177.96 (14) |
| C10—C9—C91—F91B | 59.5 (2) | C14—C15—C16—C17 | −0.8 (2) |
| C8—C9—C91—F91A | −0.6 (3) | C15—C16—C17—O20 | −179.21 (14) |
| C10—C9—C91—F91A | −179.81 (17) | C15—C16—C17—C18 | 0.0 (2) |
| C8—C9—C91—F91C | 119.09 (18) | O20—C17—C18—C19 | 179.80 (14) |
| C10—C9—C91—F91C | −60.1 (2) | C16—C17—C18—C19 | 0.6 (2) |
| C2—N1—C10—C5 | −1.0 (2) | C15—C14—C19—C18 | −0.1 (2) |
| C2—N1—C10—C9 | 178.74 (15) | C12—C14—C19—C18 | 178.60 (13) |
| C6—C5—C10—N1 | −179.48 (14) | C17—C18—C19—C14 | −0.6 (2) |
| C4—C5—C10—N1 | 0.6 (2) | C18—C17—O20—C21 | −4.8 (2) |
| C6—C5—C10—C9 | 0.7 (2) | C16—C17—O20—C21 | 174.42 (15) |
| C4—C5—C10—C9 | −179.21 (12) |
| H··· | ||||
| C6—H6···O1W | 0.987 (19) | 2.42 (2) | 3.340 (2) | 155 (2) |
| N11—H11···O1W | 0.92 (2) | 1.94 (2) | 2.845 (2) | 167 (2) |
| C19—H19···O1W | 0.977 (19) | 2.49 (2) | 3.439 (2) | 164 (1) |
| C8—H8···O20i | 1.02 (2) | 2.45 (2) | 3.427 (2) | 160 (2) |
| O1W—H1W1···N1ii | 0.91 (2) | 1.93 (2) | 2.807 (2) | 161 (2) |
| C21—H21C···CgAiii | 0.94 (2) | 2.83 (2) | 3.550 (2) | 135 (2) |
| C21—H21B···CgBiv | 0.97 (2) | 2.72 (2) | 3.503 (2) | 138 (2) |
| O1W—H1W2···CgDiii | 0.82 (3) | 2.62 (3) | 3.310 (2) | 143 (2) |
Hydrogen-bond geometry (Å, °)
CgA, CgB, CgD are the centroids of the C5–C9,C1C, N1,C2–C5,C1C and C14–C19 rings, respectively.
| H⋯ | ||||
|---|---|---|---|---|
| C6—H6⋯O1 | 0.987 (19) | 2.42 (2) | 3.340 (2) | 155 (2) |
| N11—H11⋯O1 | 0.92 (2) | 1.94 (2) | 2.845 (2) | 167 (2) |
| C19—H19⋯O1 | 0.977 (19) | 2.49 (2) | 3.439 (2) | 164 (1) |
| C8—H8⋯O20i | 1.02 (2) | 2.45 (2) | 3.427 (2) | 160 (2) |
| O1 | 0.91 (2) | 1.93 (2) | 2.807 (2) | 161 (2) |
| C21—H21 | 0.94 (2) | 2.83 (2) | 3.550 (2) | 135 (2) |
| C21—H21 | 0.97 (2) | 2.72 (2) | 3.503 (2) | 138 (2) |
| O1 | 0.82 (3) | 2.62 (3) | 3.310 (2) | 143 (2) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .