| Literature DB >> 21579154 |
Oleksiy V Amirkhanov1, Olesia V Moroz, Kateryna O Znovjyak, Elizaveta A Trush, Tetyana Yu Sliva.
Abstract
In the title compound, C(6)H(13)Cl(3)N(3)O(2)P or CCl(3)C(O)NHP(O)(N(CH(3))(2)), the phosphinoyl group is synclinal to the carbonyl group and acts as an acceptor for an inter-molecular N-H⋯O hydrogen bond from the amide group as the donor.Entities:
Year: 2010 PMID: 21579154 PMCID: PMC2979112 DOI: 10.1107/S1600536810013589
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C6H13Cl3N3O2P | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2ac 2ab | Cell parameters from 35140 reflections |
| θ = 3.6–36.1° | |
| µ = 0.87 mm−1 | |
| Block, white | |
| 0.60 × 0.40 × 0.20 mm |
| Oxford Diffraction Xcalibur Sapphire2 (large Be window) diffractometer | 5631 independent reflections |
| Radiation source: Enhance (Mo) X-ray Source | 4869 reflections with |
| graphite | |
| Detector resolution: 8.3359 pixels mm-1 | θmax = 36.1°, θmin = 3.6° |
| ω scans | |
| Absorption correction: gaussian Coppens et al. (1965) | |
| 35140 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 5631 reflections | (Δ/σ)max = 0.001 |
| 144 parameters | Δρmax = 0.46 e Å−3 |
| 0 restraints | Δρmin = −0.40 e Å−3 |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| P1 | 0.285320 (15) | 0.522358 (14) | 0.42665 (2) | 0.00982 (5) | |
| C1 | 0.14518 (6) | 0.60952 (6) | 0.48883 (9) | 0.01181 (14) | |
| C2 | 0.06928 (6) | 0.62610 (5) | 0.58869 (9) | 0.01177 (15) | |
| Cl1 | 0.033556 (15) | 0.534225 (14) | 0.67522 (3) | 0.01615 (5) | |
| Cl2 | 0.104133 (16) | 0.701650 (14) | 0.71094 (2) | 0.01672 (5) | |
| Cl3 | −0.015884 (16) | 0.668869 (15) | 0.49346 (3) | 0.01985 (6) | |
| O1 | 0.26191 (5) | 0.51406 (5) | 0.28033 (7) | 0.01480 (12) | |
| O2 | 0.15469 (5) | 0.65692 (5) | 0.39188 (8) | 0.02050 (15) | |
| N1 | 0.19672 (5) | 0.54418 (5) | 0.52192 (8) | 0.01086 (13) | |
| N2 | 0.35444 (5) | 0.59761 (5) | 0.45503 (8) | 0.01341 (14) | |
| N3 | 0.32000 (5) | 0.43758 (5) | 0.50197 (9) | 0.01413 (14) | |
| C3 | 0.36307 (7) | 0.63290 (7) | 0.59326 (10) | 0.01877 (18) | |
| H3A | 0.3449 | 0.5908 | 0.6610 | 0.028* | |
| H3B | 0.3277 | 0.6835 | 0.6014 | 0.028* | |
| H3C | 0.4224 | 0.6479 | 0.6099 | 0.028* | |
| C4 | 0.37770 (7) | 0.65551 (6) | 0.34435 (11) | 0.01709 (17) | |
| H4A | 0.3434 | 0.7070 | 0.3510 | 0.026* | |
| H4B | 0.3675 | 0.6282 | 0.2556 | 0.026* | |
| H4C | 0.4378 | 0.6702 | 0.3523 | 0.026* | |
| C5 | 0.40306 (6) | 0.42489 (7) | 0.56243 (11) | 0.01898 (18) | |
| H5A | 0.4371 | 0.4762 | 0.5507 | 0.028* | |
| H5B | 0.4313 | 0.3774 | 0.5169 | 0.028* | |
| H5C | 0.3969 | 0.4126 | 0.6605 | 0.028* | |
| C6 | 0.26438 (7) | 0.36368 (6) | 0.51134 (12) | 0.01950 (19) | |
| H6A | 0.2906 | 0.3158 | 0.4636 | 0.029* | |
| H6B | 0.2098 | 0.3767 | 0.4686 | 0.029* | |
| H6C | 0.2556 | 0.3491 | 0.6081 | 0.029* | |
| H1N | 0.1961 (10) | 0.5241 (9) | 0.6005 (17) | 0.023 (4)* |
| P1 | 0.01062 (9) | 0.01090 (9) | 0.00794 (9) | 0.00005 (7) | 0.00106 (7) | −0.00067 (7) |
| C1 | 0.0138 (4) | 0.0121 (3) | 0.0095 (3) | 0.0019 (3) | −0.0007 (3) | −0.0001 (3) |
| C2 | 0.0123 (3) | 0.0113 (3) | 0.0117 (4) | 0.0021 (3) | −0.0013 (3) | −0.0018 (3) |
| Cl1 | 0.01546 (10) | 0.01469 (9) | 0.01831 (11) | −0.00068 (7) | 0.00464 (8) | 0.00048 (7) |
| Cl2 | 0.02070 (10) | 0.01642 (10) | 0.01304 (10) | −0.00216 (7) | −0.00055 (8) | −0.00503 (7) |
| Cl3 | 0.01663 (10) | 0.01936 (10) | 0.02357 (12) | 0.00705 (8) | −0.00704 (9) | −0.00265 (8) |
| O1 | 0.0174 (3) | 0.0188 (3) | 0.0082 (3) | −0.0010 (2) | 0.0010 (2) | −0.0026 (2) |
| O2 | 0.0275 (4) | 0.0196 (3) | 0.0144 (3) | 0.0069 (3) | 0.0044 (3) | 0.0073 (3) |
| N1 | 0.0119 (3) | 0.0131 (3) | 0.0076 (3) | 0.0026 (2) | 0.0013 (2) | 0.0018 (2) |
| N2 | 0.0165 (3) | 0.0145 (3) | 0.0092 (3) | −0.0034 (3) | 0.0001 (3) | −0.0002 (2) |
| N3 | 0.0116 (3) | 0.0120 (3) | 0.0188 (4) | 0.0006 (2) | −0.0001 (3) | 0.0027 (3) |
| C3 | 0.0226 (5) | 0.0203 (4) | 0.0134 (4) | −0.0056 (3) | −0.0021 (3) | −0.0032 (3) |
| C4 | 0.0195 (4) | 0.0157 (4) | 0.0160 (4) | −0.0041 (3) | 0.0007 (3) | 0.0031 (3) |
| C5 | 0.0147 (4) | 0.0214 (4) | 0.0208 (5) | 0.0021 (3) | −0.0032 (4) | 0.0047 (4) |
| C6 | 0.0177 (4) | 0.0124 (4) | 0.0284 (5) | −0.0003 (3) | 0.0031 (4) | 0.0013 (3) |
| P1—O1 | 1.4780 (8) | N3—C6 | 1.4652 (13) |
| P1—N3 | 1.6239 (8) | C3—H3A | 0.9800 |
| P1—N2 | 1.6388 (8) | C3—H3B | 0.9800 |
| P1—N1 | 1.7141 (8) | C3—H3C | 0.9800 |
| C1—O2 | 1.2151 (11) | C4—H4A | 0.9800 |
| C1—N1 | 1.3546 (12) | C4—H4B | 0.9800 |
| C1—C2 | 1.5658 (13) | C4—H4C | 0.9800 |
| C2—Cl3 | 1.7684 (9) | C5—H5A | 0.9800 |
| C2—Cl1 | 1.7723 (10) | C5—H5B | 0.9800 |
| C2—Cl2 | 1.7745 (9) | C5—H5C | 0.9800 |
| N1—H1N | 0.828 (16) | C6—H6A | 0.9800 |
| N2—C4 | 1.4614 (13) | C6—H6B | 0.9800 |
| N2—C3 | 1.4637 (13) | C6—H6C | 0.9800 |
| N3—C5 | 1.4518 (13) | ||
| O1—P1—N3 | 116.53 (4) | N2—C3—H3A | 109.5 |
| O1—P1—N2 | 113.19 (4) | N2—C3—H3B | 109.5 |
| N3—P1—N2 | 107.40 (4) | H3A—C3—H3B | 109.5 |
| O1—P1—N1 | 109.61 (4) | N2—C3—H3C | 109.5 |
| N3—P1—N1 | 101.37 (4) | H3A—C3—H3C | 109.5 |
| N2—P1—N1 | 107.83 (4) | H3B—C3—H3C | 109.5 |
| O2—C1—N1 | 125.55 (9) | N2—C4—H4A | 109.5 |
| O2—C1—C2 | 118.29 (8) | N2—C4—H4B | 109.5 |
| N1—C1—C2 | 116.12 (8) | H4A—C4—H4B | 109.5 |
| C1—C2—Cl3 | 108.70 (6) | N2—C4—H4C | 109.5 |
| C1—C2—Cl1 | 113.68 (6) | H4A—C4—H4C | 109.5 |
| Cl3—C2—Cl1 | 108.72 (5) | H4B—C4—H4C | 109.5 |
| C1—C2—Cl2 | 106.98 (6) | N3—C5—H5A | 109.5 |
| Cl3—C2—Cl2 | 109.28 (5) | N3—C5—H5B | 109.5 |
| Cl1—C2—Cl2 | 109.40 (5) | H5A—C5—H5B | 109.5 |
| C1—N1—P1 | 121.03 (7) | N3—C5—H5C | 109.5 |
| C1—N1—H1N | 120.3 (11) | H5A—C5—H5C | 109.5 |
| P1—N1—H1N | 115.7 (11) | H5B—C5—H5C | 109.5 |
| C4—N2—C3 | 114.58 (8) | N3—C6—H6A | 109.5 |
| C4—N2—P1 | 119.89 (7) | N3—C6—H6B | 109.5 |
| C3—N2—P1 | 119.62 (7) | H6A—C6—H6B | 109.5 |
| C5—N3—C6 | 113.97 (8) | N3—C6—H6C | 109.5 |
| C5—N3—P1 | 127.02 (7) | H6A—C6—H6C | 109.5 |
| C6—N3—P1 | 119.00 (7) | H6B—C6—H6C | 109.5 |
| O2—C1—C2—Cl3 | 32.74 (11) | N3—P1—N2—C4 | 138.23 (8) |
| N1—C1—C2—Cl3 | −149.48 (7) | N1—P1—N2—C4 | −113.24 (8) |
| O2—C1—C2—Cl1 | 153.97 (8) | O1—P1—N2—C3 | 159.66 (7) |
| N1—C1—C2—Cl1 | −28.25 (10) | N3—P1—N2—C3 | −70.29 (8) |
| O2—C1—C2—Cl2 | −85.16 (10) | N1—P1—N2—C3 | 38.24 (9) |
| N1—C1—C2—Cl2 | 92.62 (8) | O1—P1—N3—C5 | 118.05 (9) |
| O2—C1—N1—P1 | 1.02 (14) | N2—P1—N3—C5 | −10.10 (10) |
| C2—C1—N1—P1 | −176.58 (6) | N1—P1—N3—C5 | −123.08 (9) |
| O1—P1—N1—C1 | −53.07 (8) | O1—P1—N3—C6 | −61.17 (9) |
| N3—P1—N1—C1 | −176.80 (7) | N2—P1—N3—C6 | 170.68 (7) |
| N2—P1—N1—C1 | 70.54 (8) | N1—P1—N3—C6 | 57.70 (8) |
| O1—P1—N2—C4 | 8.18 (9) |
| H··· | ||||
| N1—H1N···O1i | 0.828 (16) | 1.968 (16) | 2.7586 (11) | 159.3 (16) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.828 (16) | 1.968 (16) | 2.7586 (11) | 159.3 (16) |
Symmetry code: (i) .