| Literature DB >> 21579129 |
Syed Naeem Razzaq, Islam Ullah Khan, Onur Sahin, Orhan Büyükgüngör.
Abstract
In the title salt, C(9)H(18)NO(2) (+)·H(2)PO(4) (-), the cyclo-hexane ring is puckered, the total puckering amplitude Q(T) being 0.555 (4) Å, and an intra-molecular N-H⋯O hydrogen bond generates an S(7) ring. In the crystal structure, inter-molecular N-H⋯O and O-H⋯O hydrogen bonds lead to R(2) (2)(14), R(3) (3)(8) and R(4) (2)(8) rings, generating a two-dimensional layer.Entities:
Year: 2010 PMID: 21579129 PMCID: PMC2979205 DOI: 10.1107/S1600536810012973
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C9H18NO2+·H2O4P− | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2ac 2ab | Cell parameters from 1923 reflections |
| θ = 3.0–21.6° | |
| µ = 0.23 mm−1 | |
| Prism, colourless | |
| 0.31 × 0.25 × 0.22 mm |
| Bruker Kappa APEXII CCD diffractometer | 1853 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 28.3°, θmin = 1.5° |
| φ and ω scans | |
| 14659 measured reflections | |
| 3185 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3185 reflections | (Δ/σ)max < 0.001 |
| 178 parameters | Δρmax = 0.34 e Å−3 |
| 6 restraints | Δρmin = −0.45 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.6575 (4) | 0.1582 (5) | 0.67421 (15) | 0.0667 (12) | |
| H1A | 0.6569 | 0.2315 | 0.6481 | 0.080* | |
| H1B | 0.7457 | 0.1334 | 0.6812 | 0.080* | |
| C2 | 0.5874 (3) | 0.0253 (4) | 0.65538 (12) | 0.0413 (8) | |
| H2A | 0.5967 | −0.0514 | 0.6801 | 0.050* | |
| H2B | 0.6266 | −0.0070 | 0.6242 | 0.050* | |
| C3 | 0.4441 (3) | 0.0522 (3) | 0.64599 (10) | 0.0301 (7) | |
| C4 | 0.3859 (4) | 0.1206 (4) | 0.69378 (12) | 0.0477 (9) | |
| H4A | 0.2983 | 0.1474 | 0.6866 | 0.057* | |
| H4B | 0.3842 | 0.0485 | 0.7204 | 0.057* | |
| C5 | 0.4563 (4) | 0.2527 (4) | 0.71319 (15) | 0.0667 (12) | |
| H5A | 0.4489 | 0.3303 | 0.6888 | 0.080* | |
| H5B | 0.4178 | 0.2847 | 0.7446 | 0.080* | |
| C6 | 0.5961 (5) | 0.2189 (6) | 0.72201 (16) | 0.0874 (16) | |
| H6A | 0.6039 | 0.1492 | 0.7492 | 0.105* | |
| H6B | 0.6406 | 0.3061 | 0.7321 | 0.105* | |
| C7 | 0.4205 (3) | 0.1584 (3) | 0.60270 (11) | 0.0329 (7) | |
| H7A | 0.3293 | 0.1639 | 0.5966 | 0.040* | |
| H7B | 0.4487 | 0.2533 | 0.6133 | 0.040* | |
| C8 | 0.3736 (3) | −0.0923 (3) | 0.63691 (13) | 0.0445 (9) | |
| H8A | 0.3624 | −0.1395 | 0.6693 | 0.053* | |
| H8B | 0.2891 | −0.0705 | 0.6239 | 0.053* | |
| C9 | 0.4354 (3) | −0.1977 (3) | 0.60166 (12) | 0.0343 (7) | |
| N1 | 0.4845 (2) | 0.1225 (3) | 0.55463 (9) | 0.0296 (6) | |
| H3 | 0.5685 (19) | 0.141 (4) | 0.5561 (14) | 0.067 (12)* | |
| H4 | 0.473 (4) | 0.027 (2) | 0.5469 (13) | 0.069 (13)* | |
| H5 | 0.454 (3) | 0.173 (4) | 0.5291 (11) | 0.066 (12)* | |
| O5 | 0.4571 (2) | −0.1736 (2) | 0.55742 (8) | 0.0417 (6) | |
| O6 | 0.4610 (3) | −0.3214 (3) | 0.62334 (10) | 0.0537 (7) | |
| H6 | 0.500 (4) | −0.373 (4) | 0.6027 (13) | 0.085 (15)* | |
| O1 | 0.8667 (2) | 0.1053 (2) | 0.47674 (8) | 0.0366 (5) | |
| H1 | 0.929 (3) | 0.066 (4) | 0.4646 (16) | 0.091 (16)* | |
| O2 | 0.7236 (2) | −0.0726 (2) | 0.51893 (10) | 0.0413 (6) | |
| H2 | 0.739 (5) | −0.149 (3) | 0.5316 (16) | 0.102 (18)* | |
| O3 | 0.92807 (17) | −0.00007 (19) | 0.56151 (7) | 0.0279 (5) | |
| O4 | 0.74292 (18) | 0.17523 (19) | 0.55177 (8) | 0.0324 (5) | |
| P1 | 0.81774 (6) | 0.05253 (7) | 0.52950 (3) | 0.0242 (2) |
| C1 | 0.050 (2) | 0.093 (3) | 0.057 (2) | −0.009 (2) | −0.0153 (19) | −0.020 (2) |
| C2 | 0.0434 (18) | 0.050 (2) | 0.0308 (17) | 0.0091 (16) | −0.0039 (14) | 0.0055 (15) |
| C3 | 0.0353 (15) | 0.0273 (16) | 0.0277 (16) | 0.0039 (13) | 0.0068 (13) | −0.0017 (12) |
| C4 | 0.064 (2) | 0.045 (2) | 0.0339 (19) | 0.0084 (18) | 0.0157 (17) | −0.0015 (16) |
| C5 | 0.094 (3) | 0.063 (3) | 0.043 (2) | 0.002 (2) | 0.006 (2) | −0.0247 (19) |
| C6 | 0.101 (4) | 0.106 (4) | 0.055 (3) | −0.017 (3) | −0.016 (3) | −0.035 (3) |
| C7 | 0.0310 (15) | 0.0361 (18) | 0.0317 (16) | 0.0113 (13) | 0.0044 (13) | 0.0009 (13) |
| C8 | 0.0446 (19) | 0.0364 (19) | 0.052 (2) | −0.0021 (15) | 0.0225 (17) | −0.0022 (15) |
| C9 | 0.0320 (16) | 0.0271 (17) | 0.044 (2) | −0.0051 (13) | 0.0077 (14) | −0.0016 (14) |
| N1 | 0.0291 (14) | 0.0331 (16) | 0.0265 (14) | 0.0046 (12) | 0.0017 (11) | 0.0030 (12) |
| O5 | 0.0501 (14) | 0.0350 (13) | 0.0399 (14) | 0.0027 (10) | 0.0078 (11) | −0.0013 (10) |
| O6 | 0.0788 (18) | 0.0353 (15) | 0.0471 (15) | 0.0119 (13) | 0.0221 (14) | 0.0026 (12) |
| O1 | 0.0325 (11) | 0.0383 (12) | 0.0391 (13) | 0.0121 (10) | 0.0096 (10) | 0.0117 (10) |
| O2 | 0.0331 (11) | 0.0184 (12) | 0.0724 (17) | −0.0029 (9) | −0.0180 (11) | 0.0081 (11) |
| O3 | 0.0233 (9) | 0.0249 (10) | 0.0356 (11) | 0.0022 (8) | 0.0001 (8) | 0.0001 (9) |
| O4 | 0.0273 (10) | 0.0182 (10) | 0.0516 (13) | 0.0048 (8) | 0.0121 (9) | 0.0033 (9) |
| P1 | 0.0193 (3) | 0.0157 (4) | 0.0377 (4) | 0.0022 (3) | 0.0025 (3) | 0.0031 (3) |
| C1—C2 | 1.519 (5) | C7—N1 | 1.476 (4) |
| C1—C6 | 1.526 (6) | C7—H7A | 0.9700 |
| C1—H1A | 0.9700 | C7—H7B | 0.9700 |
| C1—H1B | 0.9700 | C8—C9 | 1.498 (4) |
| C2—C3 | 1.541 (4) | C8—H8A | 0.9700 |
| C2—H2A | 0.9700 | C8—H8B | 0.9700 |
| C2—H2B | 0.9700 | C9—O5 | 1.213 (3) |
| C3—C7 | 1.531 (4) | C9—O6 | 1.310 (4) |
| C3—C4 | 1.541 (4) | N1—H3 | 0.897 (18) |
| C3—C8 | 1.549 (4) | N1—H4 | 0.912 (18) |
| C4—C5 | 1.519 (5) | N1—H5 | 0.881 (18) |
| C4—H4A | 0.9700 | O6—H6 | 0.83 (4) |
| C4—H4B | 0.9700 | O1—P1 | 1.566 (2) |
| C5—C6 | 1.515 (6) | O1—H1 | 0.817 (19) |
| C5—H5A | 0.9700 | O2—P1 | 1.548 (2) |
| C5—H5B | 0.9700 | O2—H2 | 0.799 (19) |
| C6—H6A | 0.9700 | O3—P1 | 1.513 (2) |
| C6—H6B | 0.9700 | O4—P1 | 1.502 (2) |
| C2—C1—C6 | 111.5 (3) | C5—C6—H6B | 109.5 |
| C2—C1—H1A | 109.3 | C1—C6—H6B | 109.5 |
| C6—C1—H1A | 109.3 | H6A—C6—H6B | 108.1 |
| C2—C1—H1B | 109.3 | N1—C7—C3 | 115.2 (2) |
| C6—C1—H1B | 109.3 | N1—C7—H7A | 108.5 |
| H1A—C1—H1B | 108.0 | C3—C7—H7A | 108.5 |
| C1—C2—C3 | 113.1 (3) | N1—C7—H7B | 108.5 |
| C1—C2—H2A | 109.0 | C3—C7—H7B | 108.5 |
| C3—C2—H2A | 109.0 | H7A—C7—H7B | 107.5 |
| C1—C2—H2B | 109.0 | C9—C8—C3 | 117.0 (2) |
| C3—C2—H2B | 109.0 | C9—C8—H8A | 108.0 |
| H2A—C2—H2B | 107.8 | C3—C8—H8A | 108.0 |
| C7—C3—C2 | 112.5 (2) | C9—C8—H8B | 108.0 |
| C7—C3—C4 | 106.6 (2) | C3—C8—H8B | 108.0 |
| C2—C3—C4 | 108.6 (3) | H8A—C8—H8B | 107.3 |
| C7—C3—C8 | 111.3 (3) | O5—C9—O6 | 123.0 (3) |
| C2—C3—C8 | 110.5 (3) | O5—C9—C8 | 124.2 (3) |
| C4—C3—C8 | 107.1 (2) | O6—C9—C8 | 112.7 (3) |
| C5—C4—C3 | 114.7 (3) | C7—N1—H3 | 111 (2) |
| C5—C4—H4A | 108.6 | C7—N1—H4 | 111 (2) |
| C3—C4—H4A | 108.6 | H3—N1—H4 | 109 (3) |
| C5—C4—H4B | 108.6 | C7—N1—H5 | 112 (2) |
| C3—C4—H4B | 108.6 | H3—N1—H5 | 107 (3) |
| H4A—C4—H4B | 107.6 | H4—N1—H5 | 107 (3) |
| C6—C5—C4 | 110.7 (3) | C9—O6—H6 | 109 (3) |
| C6—C5—H5A | 109.5 | P1—O1—H1 | 118 (3) |
| C4—C5—H5A | 109.5 | P1—O2—H2 | 118 (3) |
| C6—C5—H5B | 109.5 | O4—P1—O3 | 115.00 (12) |
| C4—C5—H5B | 109.5 | O4—P1—O2 | 107.84 (12) |
| H5A—C5—H5B | 108.1 | O3—P1—O2 | 110.23 (12) |
| C5—C6—C1 | 110.8 (3) | O4—P1—O1 | 106.50 (11) |
| C5—C6—H6A | 109.5 | O3—P1—O1 | 110.49 (12) |
| C1—C6—H6A | 109.5 | O2—P1—O1 | 106.35 (14) |
| C6—C1—C2—C3 | 55.9 (4) | C2—C1—C6—C5 | −56.5 (5) |
| C1—C2—C3—C7 | 65.8 (4) | C2—C3—C7—N1 | 53.0 (4) |
| C1—C2—C3—C4 | −51.9 (4) | C4—C3—C7—N1 | 172.0 (3) |
| C1—C2—C3—C8 | −169.2 (3) | C8—C3—C7—N1 | −71.5 (3) |
| C7—C3—C4—C5 | −69.4 (4) | C7—C3—C8—C9 | 80.2 (3) |
| C2—C3—C4—C5 | 52.0 (4) | C2—C3—C8—C9 | −45.5 (4) |
| C8—C3—C4—C5 | 171.4 (3) | C4—C3—C8—C9 | −163.7 (3) |
| C3—C4—C5—C6 | −54.9 (4) | C3—C8—C9—O5 | −61.3 (4) |
| C4—C5—C6—C1 | 55.2 (5) | C3—C8—C9—O6 | 120.4 (3) |
| H··· | ||||
| O6—H6···O3i | 0.83 (4) | 1.77 (2) | 2.602 (3) | 173 (4) |
| O1—H1···O3ii | 0.82 (2) | 1.76 (2) | 2.569 (3) | 173 (5) |
| N1—H5···O1iii | 0.88 (2) | 2.26 (3) | 2.929 (4) | 133 (3) |
| N1—H5···O2iv | 0.88 (2) | 2.44 (3) | 2.959 (3) | 118 (3) |
| N1—H5···O5iv | 0.88 (2) | 2.47 (3) | 3.065 (3) | 125 (3) |
| N1—H4···O5 | 0.91 (2) | 1.89 (2) | 2.760 (4) | 158 (3) |
| N1—H3···O4 | 0.90 (2) | 1.86 (2) | 2.752 (3) | 174 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O6—H6⋯O3i | 0.83 (4) | 1.77 (2) | 2.602 (3) | 173 (4) |
| O1—H1⋯O3ii | 0.82 (2) | 1.76 (2) | 2.569 (3) | 173 (5) |
| N1—H5⋯O1iii | 0.88 (2) | 2.26 (3) | 2.929 (4) | 133 (3) |
| N1—H5⋯O2iv | 0.88 (2) | 2.44 (3) | 2.959 (3) | 118 (3) |
| N1—H5⋯O5iv | 0.88 (2) | 2.47 (3) | 3.065 (3) | 125 (3) |
| N1—H4⋯O5 | 0.91 (2) | 1.89 (2) | 2.760 (4) | 158 (3) |
| N1—H3⋯O4 | 0.90 (2) | 1.86 (2) | 2.752 (3) | 174 (3) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .