Literature DB >> 21579076

7-Bromo-2-(4-fluoro-phen-yl)-1-(methyl-sulfin-yl)naphtho[2,1-b]furan.

Hong Dae Choi, Pil Ja Seo, Byeng Wha Son, Uk Lee.   

Abstract

In the title compound, C(19)H(12)BrFO(2)S, the O atom and the methyl group of the methyl-sulfinyl substituent lie on opposite sides of the plane through the naphthofuran fragment. The 4-fluoro-phenyl ring is rotated out of the naphthofuran plane, making a dihedral angle of 41.65 (7)°. In the crystal, mol-ecules are linked by weak inter-molecular C-H⋯O and C-H⋯π inter-actions, and a short Br⋯F contact [3.046 (2) Å] occurs. The O atom of the sulfinyl group is disordered over two positions, with refined site-occupancy factors of 0.912 (4) and 0.088 (4).

Entities:  

Year:  2010        PMID: 21579076      PMCID: PMC2979164          DOI: 10.1107/S1600536810011645

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structures of similar 7-bromo-2-phenyl­naphtho[2,1-b]furan derivatives, see: Choi et al. (2006 ▶, 2009 ▶). For the biological activity of naphthofuran compounds, see: Einhorn et al. (1984 ▶); Hranjec et al. (2003 ▶); Mahadevan & Vaidya (2003 ▶).

Experimental

Crystal data

C19H12BrFO2S M = 403.26 Monoclinic, a = 6.0155 (2) Å b = 22.7143 (6) Å c = 11.4364 (3) Å β = 91.716 (1)° V = 1561.94 (8) Å3 Z = 4 Mo Kα radiation μ = 2.79 mm−1 T = 173 K 0.31 × 0.28 × 0.16 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.515, T max = 0.746 14194 measured reflections 3547 independent reflections 3086 reflections with I > 2σ(I) R int = 0.031

Refinement

R[F 2 > 2σ(F 2)] = 0.032 wR(F 2) = 0.078 S = 1.09 3547 reflections 228 parameters 1 restraint H-atom parameters constrained Δρmax = 0.55 e Å−3 Δρmin = −0.66 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810011645/zl2274sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810011645/zl2274Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C19H12BrFO2SF(000) = 808
Mr = 403.26Dx = 1.715 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 6681 reflections
a = 6.0155 (2) Åθ = 2.5–27.3°
b = 22.7143 (6) ŵ = 2.79 mm1
c = 11.4364 (3) ÅT = 173 K
β = 91.716 (1)°Block, colourless
V = 1561.94 (8) Å30.31 × 0.28 × 0.16 mm
Z = 4
Bruker SMART APEXII CCD diffractometer3547 independent reflections
Radiation source: Rotating Anode3086 reflections with I > 2σ(I)
Bruker HELIOS graded multilayer opticsRint = 0.031
Detector resolution: 10.0 pixels mm-1θmax = 27.4°, θmin = 1.8°
φ and ω scansh = −7→7
Absorption correction: multi-scan (SADABS; Bruker, 2009)k = −29→28
Tmin = 0.515, Tmax = 0.746l = −14→14
14194 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.032Hydrogen site location: difference Fourier map
wR(F2) = 0.078H-atom parameters constrained
S = 1.09w = 1/[σ2(Fo2) + (0.0285P)2 + 1.3174P] where P = (Fo2 + 2Fc2)/3
3547 reflections(Δ/σ)max < 0.001
228 parametersΔρmax = 0.55 e Å3
1 restraintΔρmin = −0.66 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
Br−0.48150 (5)0.382579 (12)1.04709 (2)0.03916 (10)
S0.47791 (10)0.28043 (2)0.66043 (5)0.02628 (13)
F1.2163 (3)0.36776 (7)0.25403 (14)0.0483 (4)
O10.5560 (3)0.45183 (6)0.62399 (13)0.0243 (3)
O2A0.4525 (3)0.25792 (7)0.78045 (15)0.0328 (5)0.912 (4)
O2B0.6982 (13)0.2602 (6)0.6238 (14)0.024 (5)0.088 (4)
C10.4554 (4)0.35832 (9)0.66166 (18)0.0218 (4)
C20.3135 (4)0.39689 (9)0.72727 (18)0.0218 (4)
C30.1281 (4)0.39074 (9)0.80143 (17)0.0224 (4)
C40.0413 (4)0.33627 (10)0.84002 (19)0.0267 (5)
H40.10740.30130.81680.032*
C5−0.1380 (4)0.33420 (10)0.9107 (2)0.0302 (5)
H5−0.19310.29820.93530.036*
C6−0.2378 (4)0.38667 (10)0.94578 (19)0.0284 (5)
C7−0.1620 (4)0.44040 (10)0.91127 (18)0.0281 (5)
H7−0.23290.47460.93490.034*
C80.0242 (4)0.44381 (9)0.83966 (18)0.0245 (4)
C90.1093 (4)0.49995 (9)0.80711 (18)0.0272 (5)
H90.03930.53380.83320.033*
C100.2894 (4)0.50541 (9)0.73923 (18)0.0265 (5)
H100.34650.54200.71970.032*
C110.3846 (4)0.45309 (9)0.70009 (17)0.0226 (4)
C120.5951 (4)0.39335 (9)0.60055 (18)0.0222 (4)
C130.7632 (4)0.38339 (9)0.51270 (18)0.0227 (4)
C140.7334 (4)0.34109 (10)0.42469 (19)0.0275 (5)
H140.60910.31670.42450.033*
C150.8873 (4)0.33521 (10)0.3378 (2)0.0314 (5)
H150.86820.30720.27910.038*
C161.0688 (4)0.37188 (10)0.3406 (2)0.0322 (5)
C171.1043 (4)0.41416 (10)0.4261 (2)0.0295 (5)
H171.22960.43820.42560.035*
C180.9504 (4)0.41994 (9)0.51190 (19)0.0252 (4)
H180.97080.44830.56980.030*
C190.2271 (4)0.26380 (10)0.5786 (2)0.0328 (5)
H19A0.20180.22210.57960.049*
H19B0.24090.27680.49930.049*
H19C0.10420.28360.61310.049*
U11U22U33U12U13U23
Br0.03555 (15)0.05091 (17)0.03161 (14)−0.01198 (11)0.01077 (10)−0.00502 (11)
S0.0273 (3)0.0176 (2)0.0338 (3)0.0016 (2)−0.0020 (2)0.0026 (2)
F0.0514 (10)0.0486 (9)0.0464 (9)0.0068 (8)0.0279 (8)−0.0001 (7)
O10.0293 (8)0.0186 (7)0.0251 (7)−0.0030 (6)0.0028 (6)0.0004 (6)
O2A0.0417 (12)0.0238 (9)0.0326 (10)−0.0001 (8)−0.0051 (8)0.0102 (7)
O2B0.036 (11)0.010 (7)0.025 (9)−0.003 (7)0.003 (7)0.007 (6)
C10.0228 (11)0.0192 (9)0.0233 (10)0.0001 (8)−0.0023 (8)0.0019 (8)
C20.0258 (11)0.0199 (10)0.0193 (9)0.0000 (8)−0.0033 (8)0.0016 (7)
C30.0263 (11)0.0229 (10)0.0177 (9)−0.0020 (8)−0.0031 (8)0.0008 (8)
C40.0294 (12)0.0228 (10)0.0277 (11)−0.0014 (9)−0.0008 (9)0.0027 (8)
C50.0323 (13)0.0297 (11)0.0285 (11)−0.0081 (10)−0.0003 (9)0.0042 (9)
C60.0257 (12)0.0389 (13)0.0207 (10)−0.0049 (10)0.0013 (8)0.0001 (9)
C70.0320 (13)0.0304 (11)0.0218 (10)0.0015 (9)0.0009 (9)−0.0005 (9)
C80.0298 (12)0.0257 (10)0.0178 (9)0.0006 (9)−0.0012 (8)0.0001 (8)
C90.0392 (14)0.0205 (10)0.0219 (10)0.0034 (9)0.0031 (9)−0.0010 (8)
C100.0378 (13)0.0184 (10)0.0234 (10)−0.0017 (9)0.0014 (9)0.0006 (8)
C110.0254 (11)0.0227 (10)0.0198 (10)−0.0024 (8)0.0004 (8)0.0006 (8)
C120.0254 (11)0.0187 (10)0.0222 (10)−0.0003 (8)−0.0032 (8)−0.0007 (7)
C130.0237 (11)0.0220 (10)0.0222 (10)0.0012 (8)−0.0008 (8)0.0030 (8)
C140.0298 (12)0.0241 (10)0.0286 (11)−0.0009 (9)−0.0007 (9)−0.0006 (9)
C150.0408 (14)0.0267 (11)0.0269 (11)0.0049 (10)0.0028 (10)−0.0031 (9)
C160.0353 (14)0.0326 (12)0.0294 (12)0.0094 (10)0.0094 (10)0.0058 (9)
C170.0255 (12)0.0281 (11)0.0349 (12)−0.0001 (9)0.0015 (9)0.0082 (9)
C180.0271 (12)0.0231 (10)0.0250 (11)0.0002 (9)−0.0032 (9)0.0011 (8)
C190.0353 (14)0.0251 (11)0.0375 (13)−0.0045 (10)−0.0070 (10)−0.0012 (9)
F—Bri3.0457 (15)C7—H70.9300
Br—C61.898 (2)C8—C91.428 (3)
S—O2B1.475 (3)C9—C101.357 (3)
S—O2A1.4769 (18)C9—H90.9300
S—C11.775 (2)C10—C111.399 (3)
S—C191.792 (2)C10—H100.9300
F—C161.352 (3)C12—C131.464 (3)
O1—C111.370 (3)C13—C181.399 (3)
O1—C121.377 (2)C13—C141.399 (3)
C1—C121.365 (3)C14—C151.385 (3)
C1—C21.448 (3)C14—H140.9300
C2—C111.384 (3)C15—C161.373 (4)
C2—C31.428 (3)C15—H150.9300
C3—C41.419 (3)C16—C171.383 (3)
C3—C81.432 (3)C17—C181.376 (3)
C4—C51.368 (3)C17—H170.9300
C4—H40.9300C18—H180.9300
C5—C61.398 (3)C19—H19A0.9600
C5—H50.9300C19—H19B0.9600
C6—C71.365 (3)C19—H19C0.9600
C7—C81.409 (3)
C16—F—Bri168.86 (14)C8—C9—H9119.0
O2B—S—O2A106.0 (6)C9—C10—C11116.5 (2)
O2B—S—C1112.5 (6)C9—C10—H10121.7
O2A—S—C1109.13 (10)C11—C10—H10121.7
O2B—S—C19122.4 (7)O1—C11—C2111.52 (18)
O2A—S—C19107.67 (12)O1—C11—C10122.99 (19)
C1—S—C1998.68 (11)C2—C11—C10125.4 (2)
C11—O1—C12106.28 (16)C1—C12—O1110.56 (19)
C12—C1—C2107.11 (18)C1—C12—C13135.23 (19)
C12—C1—S121.91 (17)O1—C12—C13114.09 (17)
C2—C1—S130.82 (16)C18—C13—C14119.3 (2)
C11—C2—C3118.38 (19)C18—C13—C12119.03 (19)
C11—C2—C1104.53 (18)C14—C13—C12121.5 (2)
C3—C2—C1137.00 (19)C15—C14—C13120.5 (2)
C4—C3—C2124.9 (2)C15—C14—H14119.7
C4—C3—C8118.1 (2)C13—C14—H14119.7
C2—C3—C8117.05 (18)C16—C15—C14118.3 (2)
C5—C4—C3121.2 (2)C16—C15—H15120.9
C5—C4—H4119.4C14—C15—H15120.9
C3—C4—H4119.4F—C16—C15118.7 (2)
C4—C5—C6119.5 (2)F—C16—C17118.4 (2)
C4—C5—H5120.2C15—C16—C17122.9 (2)
C6—C5—H5120.2C18—C17—C16118.5 (2)
C7—C6—C5121.9 (2)C18—C17—H17120.7
C7—C6—Br119.41 (18)C16—C17—H17120.7
C5—C6—Br118.63 (17)C17—C18—C13120.5 (2)
C6—C7—C8119.7 (2)C17—C18—H18119.8
C6—C7—H7120.2C13—C18—H18119.8
C8—C7—H7120.2S—C19—H19A109.5
C7—C8—C9119.9 (2)S—C19—H19B109.5
C7—C8—C3119.5 (2)H19A—C19—H19B109.5
C9—C8—C3120.6 (2)S—C19—H19C109.5
C10—C9—C8122.0 (2)H19A—C19—H19C109.5
C10—C9—H9119.0H19B—C19—H19C109.5
O2B—S—C1—C1219.7 (7)C8—C9—C10—C111.6 (3)
O2A—S—C1—C12137.02 (18)C12—O1—C11—C20.6 (2)
C19—S—C1—C12−110.77 (19)C12—O1—C11—C10−176.4 (2)
O2B—S—C1—C2−155.0 (7)C3—C2—C11—O1−177.03 (17)
O2A—S—C1—C2−37.8 (2)C1—C2—C11—O10.1 (2)
C19—S—C1—C274.5 (2)C3—C2—C11—C10−0.1 (3)
C12—C1—C2—C11−0.7 (2)C1—C2—C11—C10177.0 (2)
S—C1—C2—C11174.62 (17)C9—C10—C11—O1174.94 (19)
C12—C1—C2—C3175.5 (2)C9—C10—C11—C2−1.7 (3)
S—C1—C2—C3−9.1 (4)C2—C1—C12—O11.2 (2)
C11—C2—C3—C4−177.8 (2)S—C1—C12—O1−174.72 (14)
C1—C2—C3—C46.3 (4)C2—C1—C12—C13−174.4 (2)
C11—C2—C3—C81.9 (3)S—C1—C12—C139.8 (4)
C1—C2—C3—C8−174.0 (2)C11—O1—C12—C1−1.1 (2)
C2—C3—C4—C5−179.7 (2)C11—O1—C12—C13175.45 (17)
C8—C3—C4—C50.7 (3)C1—C12—C13—C18−146.4 (2)
C3—C4—C5—C60.0 (3)O1—C12—C13—C1838.2 (3)
C4—C5—C6—C70.2 (4)C1—C12—C13—C1438.3 (4)
C4—C5—C6—Br−178.44 (17)O1—C12—C13—C14−137.1 (2)
C5—C6—C7—C8−1.0 (4)C18—C13—C14—C150.2 (3)
Br—C6—C7—C8177.61 (16)C12—C13—C14—C15175.5 (2)
C6—C7—C8—C9−177.6 (2)C13—C14—C15—C160.0 (3)
C6—C7—C8—C31.6 (3)C14—C15—C16—F−177.9 (2)
C4—C3—C8—C7−1.5 (3)C14—C15—C16—C170.1 (4)
C2—C3—C8—C7178.87 (19)F—C16—C17—C18177.6 (2)
C4—C3—C8—C9177.7 (2)C15—C16—C17—C18−0.3 (4)
C2—C3—C8—C9−2.0 (3)C16—C17—C18—C130.5 (3)
C7—C8—C9—C10179.4 (2)C14—C13—C18—C17−0.5 (3)
C3—C8—C9—C100.2 (3)C12—C13—C18—C17−175.9 (2)
Cg is the centroid of the C2/C3/C8/C9/C10/C11 ring.
D—H···AD—HH···AD···AD—H···A
C14—H14···O2Aii0.932.533.235 (3)133
C18—H18···Cgiii0.932.653.347 (3)132
Table 1

Hydrogen-bond geometry (Å, °)

Cg is the centroid of the C2/C3/C8/C9/C10/C11 ring.

D—H⋯AD—HH⋯ADAD—H⋯A
C14—H14⋯O2Ai0.932.533.235 (3)133
C18—H18⋯Cgii0.932.653.347 (3)132

Symmetry codes: (i) ; (ii) .

  3 in total

1.  Synthesis and antitumor evaluation of some new substituted amidino-benzimidazolyl-furyl-phenyl-acrylates and naphtho[2,1-b]furan-carboxylates.

Authors:  M Hranjec; M Grdisa; K Pavelic; D W Boykin; G Karminski-Zamola
Journal:  Farmaco       Date:  2003-12

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  7-Bromo-1-methyl-sulfinyl-2-phenyl-naphtho[2,1-b]furan.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-22
  3 in total
  2 in total

1.  1-Ethyl-sulfinyl-2-(4-iodo-phen-yl)naphtho-[2,1-b]furan.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-07-31

2.  7-Bromo-2-(4-methyl-phen-yl)-1-(methyl-sulfin-yl)naphtho-[2,1-b]furan.

Authors:  Hong Dae Choi; Pil Ja Seo; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-06-22
  2 in total

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