| Literature DB >> 21579059 |
Wen-Jun Zhou1, Yin-Zhi Jiang, Yang Zou.
Abstract
The Cu(II) atom of the title complex, [Cu(C(16)H(12)ClNO(3))(C(3)H(4)N(2))]·H(2)O, has a distorted square-planar coordination geometry formed by a tridentate Schiff base dianion and an imidazole ligand. The imidazole is nearly coplanar with the coordination plane, the dihedral angle between the planes being 3.73 (12)°. In the Schiff base ligand, the two benzene rings are oriented at a dihedral angle of 75.87 (12)°. O-H⋯O and N-H⋯O hydrogen bonding is present in the crystal structure. One H atom of the uncoordinated water mol-ecule is disordered equally over two sites.Entities:
Year: 2010 PMID: 21579059 PMCID: PMC2979152 DOI: 10.1107/S1600536810014765
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Cu(C16H12ClNO3)(C3H4N2)]·H2O | |
| Monoclinic, | Mo |
| Hall symbol: -C 2yc | Cell parameters from 3298 reflections |
| θ = 1.7–27.5° | |
| µ = 1.34 mm−1 | |
| β = 96.88 (1)° | Block, dark green |
| 0.20 × 0.20 × 0.15 mm | |
| Bruker SMART CCD diffractometer | 4310 independent reflections |
| Radiation source: fine-focus sealed tube | 3298 reflections with |
| graphite | |
| φ and ω scans | θmax = 27.5°, θmin = 1.7° |
| Absorption correction: multi-scan ( | |
| 18085 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 4310 reflections | (Δ/σ)max < 0.001 |
| 253 parameters | Δρmax = 0.33 e Å−3 |
| 0 restraints | Δρmin = −0.29 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| Occ. (<1) | |||||
| Cu1 | 0.257392 (11) | 0.70003 (6) | 0.103939 (8) | 0.03102 (10) | |
| Cl1 | −0.00394 (3) | 1.30201 (17) | 0.18252 (3) | 0.0645 (2) | |
| N1 | 0.20142 (7) | 0.4707 (4) | 0.12667 (6) | 0.0301 (4) | |
| N2 | 0.31243 (7) | 0.9444 (4) | 0.08174 (6) | 0.0332 (4) | |
| N3 | 0.34883 (9) | 1.2624 (4) | 0.04560 (7) | 0.0414 (5) | |
| H3A | 0.3513 | 1.3915 | 0.0279 | 0.050* | |
| O1 | 0.31821 (6) | 0.5542 (4) | 0.14014 (5) | 0.0406 (4) | |
| O2 | 0.13208 (7) | 0.8259 (4) | 0.00906 (5) | 0.0425 (4) | |
| O3 | 0.20152 (7) | 0.8490 (4) | 0.06065 (5) | 0.0436 (4) | |
| C1 | 0.31811 (10) | 0.3666 (5) | 0.16842 (7) | 0.0351 (5) | |
| C2 | 0.36998 (10) | 0.2833 (6) | 0.19110 (8) | 0.0439 (6) | |
| H2 | 0.4033 | 0.3671 | 0.1858 | 0.053* | |
| C3 | 0.37183 (11) | 0.0827 (6) | 0.22041 (7) | 0.0447 (6) | |
| H3 | 0.4065 | 0.0316 | 0.2346 | 0.054* | |
| C4 | 0.32307 (11) | −0.0477 (6) | 0.22958 (8) | 0.0462 (7) | |
| H4 | 0.3250 | −0.1838 | 0.2498 | 0.055* | |
| C5 | 0.27261 (10) | 0.0272 (5) | 0.20854 (7) | 0.0409 (6) | |
| H5 | 0.2400 | −0.0594 | 0.2146 | 0.049* | |
| C6 | 0.26851 (10) | 0.2331 (5) | 0.17774 (7) | 0.0329 (5) | |
| C7 | 0.21439 (10) | 0.2914 (5) | 0.15579 (7) | 0.0335 (5) | |
| H7 | 0.1846 | 0.1879 | 0.1633 | 0.040* | |
| C8 | 0.14124 (9) | 0.4717 (5) | 0.10794 (7) | 0.0308 (5) | |
| H8 | 0.1251 | 0.2993 | 0.1157 | 0.037* | |
| C9 | 0.10709 (9) | 0.6933 (5) | 0.12577 (7) | 0.0313 (5) | |
| C10 | 0.11509 (10) | 0.7554 (5) | 0.16848 (8) | 0.0383 (6) | |
| H10 | 0.1440 | 0.6701 | 0.1857 | 0.046* | |
| C11 | 0.08136 (10) | 0.9405 (6) | 0.18610 (8) | 0.0433 (6) | |
| H11 | 0.0875 | 0.9788 | 0.2147 | 0.052* | |
| C12 | 0.03856 (10) | 1.0673 (5) | 0.16069 (8) | 0.0426 (6) | |
| C13 | 0.02920 (10) | 1.0118 (5) | 0.11820 (8) | 0.0431 (6) | |
| H13 | 0.0003 | 1.0987 | 0.1013 | 0.052* | |
| C14 | 0.06307 (9) | 0.8260 (5) | 0.10105 (8) | 0.0387 (6) | |
| H14 | 0.0565 | 0.7881 | 0.0724 | 0.046* | |
| C15 | 0.13857 (9) | 0.4720 (5) | 0.05973 (7) | 0.0331 (5) | |
| H15A | 0.1617 | 0.3250 | 0.0513 | 0.040* | |
| H15B | 0.1000 | 0.4373 | 0.0477 | 0.040* | |
| C16 | 0.15803 (9) | 0.7320 (5) | 0.04156 (7) | 0.0325 (5) | |
| C17 | 0.30207 (10) | 1.1329 (5) | 0.05273 (7) | 0.0385 (6) | |
| H17 | 0.2664 | 1.1707 | 0.0389 | 0.046* | |
| C18 | 0.39202 (11) | 1.1523 (6) | 0.07154 (8) | 0.0487 (7) | |
| H18 | 0.4298 | 1.2016 | 0.0735 | 0.058* | |
| C19 | 0.36968 (9) | 0.9583 (6) | 0.09385 (8) | 0.0408 (6) | |
| H19 | 0.3897 | 0.8504 | 0.1142 | 0.049* | |
| O1W | 0.48323 (8) | 0.7498 (5) | 0.01584 (7) | 0.0703 (6) | |
| H1W | 0.4469 | 0.7337 | 0.0159 | 0.084* | |
| H2W1 | 0.4959 | 0.8883 | 0.0066 | 0.084* | 0.50 |
| H2W2 | 0.4987 | 0.6209 | 0.0050 | 0.084* | 0.50 |
| Cu1 | 0.02878 (15) | 0.03081 (17) | 0.03347 (16) | −0.00405 (12) | 0.00374 (11) | 0.00462 (13) |
| Cl1 | 0.0498 (4) | 0.0640 (5) | 0.0836 (6) | 0.0023 (4) | 0.0240 (4) | −0.0184 (4) |
| N1 | 0.0281 (9) | 0.0298 (11) | 0.0323 (10) | −0.0028 (8) | 0.0034 (8) | 0.0038 (9) |
| N2 | 0.0315 (10) | 0.0363 (12) | 0.0314 (10) | −0.0053 (9) | 0.0027 (8) | 0.0040 (9) |
| N3 | 0.0459 (12) | 0.0394 (13) | 0.0399 (11) | −0.0119 (10) | 0.0094 (9) | 0.0071 (10) |
| O1 | 0.0320 (8) | 0.0453 (11) | 0.0439 (10) | −0.0041 (8) | 0.0017 (7) | 0.0127 (9) |
| O2 | 0.0417 (9) | 0.0455 (11) | 0.0387 (9) | −0.0073 (8) | −0.0022 (8) | 0.0123 (8) |
| O3 | 0.0362 (9) | 0.0392 (11) | 0.0525 (10) | −0.0121 (8) | −0.0064 (8) | 0.0160 (9) |
| C1 | 0.0399 (13) | 0.0362 (14) | 0.0290 (12) | 0.0020 (11) | 0.0040 (10) | −0.0005 (11) |
| C2 | 0.0349 (13) | 0.0546 (18) | 0.0418 (14) | 0.0031 (12) | 0.0025 (11) | 0.0028 (13) |
| C3 | 0.0447 (14) | 0.0524 (17) | 0.0354 (13) | 0.0139 (13) | −0.0020 (11) | 0.0034 (13) |
| C4 | 0.0584 (16) | 0.0458 (17) | 0.0340 (13) | 0.0074 (14) | 0.0034 (12) | 0.0102 (12) |
| C5 | 0.0450 (14) | 0.0396 (15) | 0.0381 (13) | −0.0007 (12) | 0.0050 (11) | 0.0069 (12) |
| C6 | 0.0354 (12) | 0.0322 (13) | 0.0310 (12) | 0.0030 (10) | 0.0044 (9) | 0.0014 (10) |
| C7 | 0.0341 (12) | 0.0310 (13) | 0.0364 (12) | −0.0047 (11) | 0.0081 (10) | 0.0022 (11) |
| C8 | 0.0276 (11) | 0.0297 (12) | 0.0349 (12) | −0.0080 (10) | 0.0026 (9) | 0.0058 (10) |
| C9 | 0.0271 (11) | 0.0332 (13) | 0.0340 (12) | −0.0093 (10) | 0.0043 (9) | 0.0028 (11) |
| C10 | 0.0343 (12) | 0.0436 (16) | 0.0366 (13) | −0.0048 (11) | 0.0023 (10) | 0.0048 (11) |
| C11 | 0.0448 (14) | 0.0499 (17) | 0.0359 (13) | −0.0082 (13) | 0.0076 (11) | −0.0029 (13) |
| C12 | 0.0344 (12) | 0.0404 (15) | 0.0552 (16) | −0.0069 (12) | 0.0152 (11) | −0.0048 (13) |
| C13 | 0.0293 (12) | 0.0477 (16) | 0.0508 (15) | −0.0029 (12) | −0.0009 (11) | 0.0003 (13) |
| C14 | 0.0329 (12) | 0.0457 (16) | 0.0367 (13) | −0.0029 (12) | 0.0003 (10) | −0.0016 (12) |
| C15 | 0.0348 (12) | 0.0282 (13) | 0.0355 (12) | −0.0060 (10) | 0.0009 (10) | −0.0003 (11) |
| C16 | 0.0325 (11) | 0.0325 (13) | 0.0332 (12) | −0.0026 (10) | 0.0073 (10) | 0.0018 (10) |
| C17 | 0.0354 (12) | 0.0422 (15) | 0.0381 (13) | −0.0083 (11) | 0.0046 (10) | 0.0050 (12) |
| C18 | 0.0370 (13) | 0.0574 (19) | 0.0522 (16) | −0.0136 (13) | 0.0069 (12) | 0.0030 (14) |
| C19 | 0.0319 (12) | 0.0470 (16) | 0.0425 (14) | −0.0066 (11) | 0.0004 (10) | 0.0069 (12) |
| O1W | 0.0450 (11) | 0.0803 (16) | 0.0830 (15) | −0.0032 (11) | −0.0032 (11) | 0.0025 (12) |
| Cu1—O1 | 1.8894 (16) | C6—C7 | 1.425 (3) |
| Cu1—O3 | 1.9494 (16) | C7—H7 | 0.9300 |
| Cu1—N1 | 1.9582 (18) | C8—C9 | 1.518 (3) |
| Cu1—N2 | 1.9789 (18) | C8—C15 | 1.537 (3) |
| Cl1—C12 | 1.742 (3) | C8—H8 | 0.9800 |
| N1—C7 | 1.297 (3) | C9—C10 | 1.392 (3) |
| N1—C8 | 1.489 (3) | C9—C14 | 1.401 (3) |
| N2—C17 | 1.318 (3) | C10—C11 | 1.383 (3) |
| N2—C19 | 1.378 (3) | C10—H10 | 0.9300 |
| N3—C17 | 1.331 (3) | C11—C12 | 1.379 (3) |
| N3—C18 | 1.358 (3) | C11—H11 | 0.9300 |
| N3—H3A | 0.8600 | C12—C13 | 1.379 (3) |
| O1—C1 | 1.296 (3) | C13—C14 | 1.381 (3) |
| O2—C16 | 1.236 (3) | C13—H13 | 0.9300 |
| O3—C16 | 1.278 (3) | C14—H14 | 0.9300 |
| C1—C6 | 1.419 (3) | C15—C16 | 1.507 (3) |
| C1—C2 | 1.420 (3) | C15—H15A | 0.9700 |
| C2—C3 | 1.362 (4) | C15—H15B | 0.9700 |
| C2—H2 | 0.9300 | C17—H17 | 0.9300 |
| C3—C4 | 1.393 (4) | C18—C19 | 1.344 (3) |
| C3—H3 | 0.9300 | C18—H18 | 0.9300 |
| C4—C5 | 1.360 (3) | C19—H19 | 0.9300 |
| C4—H4 | 0.9300 | O1W—H1W | 0.8709 |
| C5—C6 | 1.412 (3) | O1W—H2W1 | 0.8180 |
| C5—H5 | 0.9300 | O1W—H2W2 | 0.8325 |
| O1—Cu1—O3 | 172.18 (7) | C9—C8—H8 | 106.6 |
| O1—Cu1—N1 | 93.45 (7) | C15—C8—H8 | 106.6 |
| O3—Cu1—N1 | 92.47 (7) | C10—C9—C14 | 117.2 (2) |
| O1—Cu1—N2 | 87.61 (7) | C10—C9—C8 | 120.8 (2) |
| O3—Cu1—N2 | 86.66 (7) | C14—C9—C8 | 121.8 (2) |
| N1—Cu1—N2 | 177.75 (8) | C11—C10—C9 | 121.9 (2) |
| C7—N1—C8 | 115.30 (18) | C11—C10—H10 | 119.1 |
| C7—N1—Cu1 | 123.22 (15) | C9—C10—H10 | 119.1 |
| C8—N1—Cu1 | 121.16 (14) | C12—C11—C10 | 119.2 (2) |
| C17—N2—C19 | 105.0 (2) | C12—C11—H11 | 120.4 |
| C17—N2—Cu1 | 127.44 (16) | C10—C11—H11 | 120.4 |
| C19—N2—Cu1 | 127.53 (16) | C11—C12—C13 | 120.8 (2) |
| C17—N3—C18 | 107.1 (2) | C11—C12—Cl1 | 119.5 (2) |
| C17—N3—H3A | 126.5 | C13—C12—Cl1 | 119.6 (2) |
| C18—N3—H3A | 126.5 | C12—C13—C14 | 119.4 (2) |
| C1—O1—Cu1 | 129.47 (15) | C12—C13—H13 | 120.3 |
| C16—O3—Cu1 | 128.07 (16) | C14—C13—H13 | 120.3 |
| O1—C1—C6 | 123.5 (2) | C13—C14—C9 | 121.5 (2) |
| O1—C1—C2 | 119.3 (2) | C13—C14—H14 | 119.2 |
| C6—C1—C2 | 117.2 (2) | C9—C14—H14 | 119.2 |
| C3—C2—C1 | 121.2 (2) | C16—C15—C8 | 114.26 (19) |
| C3—C2—H2 | 119.4 | C16—C15—H15A | 108.7 |
| C1—C2—H2 | 119.4 | C8—C15—H15A | 108.7 |
| C2—C3—C4 | 121.5 (2) | C16—C15—H15B | 108.7 |
| C2—C3—H3 | 119.2 | C8—C15—H15B | 108.7 |
| C4—C3—H3 | 119.2 | H15A—C15—H15B | 107.6 |
| C5—C4—C3 | 118.9 (2) | O2—C16—O3 | 122.0 (2) |
| C5—C4—H4 | 120.5 | O2—C16—C15 | 119.9 (2) |
| C3—C4—H4 | 120.5 | O3—C16—C15 | 118.1 (2) |
| C4—C5—C6 | 121.7 (2) | N2—C17—N3 | 111.7 (2) |
| C4—C5—H5 | 119.2 | N2—C17—H17 | 124.1 |
| C6—C5—H5 | 119.2 | N3—C17—H17 | 124.1 |
| C5—C6—C1 | 119.5 (2) | C19—C18—N3 | 106.9 (2) |
| C5—C6—C7 | 118.2 (2) | C19—C18—H18 | 126.6 |
| C1—C6—C7 | 122.2 (2) | N3—C18—H18 | 126.6 |
| N1—C7—C6 | 128.1 (2) | C18—C19—N2 | 109.3 (2) |
| N1—C7—H7 | 115.9 | C18—C19—H19 | 125.4 |
| C6—C7—H7 | 115.9 | N2—C19—H19 | 125.4 |
| N1—C8—C9 | 112.78 (18) | H1W—O1W—H2W1 | 119.3 |
| N1—C8—C15 | 109.03 (17) | H1W—O1W—H2W2 | 115.1 |
| C9—C8—C15 | 114.66 (19) | H2W1—O1W—H2W2 | 106.8 |
| N1—C8—H8 | 106.6 |
| H··· | ||||
| O1W—H1W···O2i | 0.87 | 1.98 | 2.799 (3) | 156 |
| O1W—H2W1···O1Wii | 0.82 | 2.01 | 2.826 (4) | 172 |
| O1W—H2W2···O1Wiii | 0.83 | 2.02 | 2.822 (5) | 163 |
| N3—H3A···O2iv | 0.86 | 1.90 | 2.758 (3) | 172 |
Selected bond lengths (Å)
| Cu1—O1 | 1.8894 (16) |
| Cu1—O3 | 1.9494 (16) |
| Cu1—N1 | 1.9582 (18) |
| Cu1—N2 | 1.9789 (18) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1 | 0.87 | 1.98 | 2.799 (3) | 156 |
| O1 | 0.82 | 2.01 | 2.826 (4) | 172 |
| O1 | 0.83 | 2.02 | 2.822 (5) | 163 |
| N3—H3 | 0.86 | 1.90 | 2.758 (3) | 172 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .