| Literature DB >> 21578967 |
Rui-Sha Zhou1, Jiang-Feng Song.
Abstract
In the crystal structure of the title compound, C(20)H(12)N(6)O(2), the mol-ecules are located on centres of inversion. The complete mol-ecule is almost planar, with a maximum deviation from the mean plane of 0.0657 (1) Å for the O atom. In the crystal, mol-ecules are stacked into columns elongated in the a axis direction. The centroid-centroid distances between the aromatic rings of the mol-ecules within the columns are 3.6406 (1) and 3.6287 (2) Å. Mol-ecules are additionally connected via weak inter-molecular C-H⋯N hydrogen bonding.Entities:
Year: 2009 PMID: 21578967 PMCID: PMC2971886 DOI: 10.1107/S1600536809050557
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C20H12N6O2 | |
| Monoclinic, | Mo |
| θ = 2.3–26.1° | |
| µ = 0.10 mm−1 | |
| β = 96.635 (2)° | Needle, yellow |
| 0.30 × 0.18 × 0.15 mm | |
| Bruker SMART APEX CCD diffractometer | 1665 independent reflections |
| Radiation source: fine-focus sealed tube | 1114 reflections with |
| graphite | |
| ω scans | θmax = 26.1°, θmin = 2.3° |
| Absorption correction: multi-scan ( | |
| 4541 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1665 reflections | (Δ/σ)max = 0.001 |
| 151 parameters | Δρmax = 0.18 e Å−3 |
| 0 restraints | Δρmin = −0.13 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 1.0105 (2) | 0.26943 (17) | 0.91503 (7) | 0.0455 (4) | |
| N1 | 1.0141 (3) | 0.2372 (2) | 1.03852 (9) | 0.0481 (5) | |
| N2 | 0.8290 (3) | 0.1534 (2) | 1.00208 (9) | 0.0490 (5) | |
| C2 | 1.3123 (3) | 0.4031 (2) | 0.99232 (11) | 0.0393 (5) | |
| C6 | 0.6794 (3) | 0.1193 (3) | 0.86751 (11) | 0.0427 (5) | |
| C4 | 1.1139 (3) | 0.3024 (2) | 0.98550 (10) | 0.0406 (5) | |
| C5 | 0.8350 (3) | 0.1759 (2) | 0.93029 (11) | 0.0419 (5) | |
| C1 | 1.4231 (3) | 0.4324 (3) | 1.06365 (12) | 0.0445 (5) | |
| C3 | 1.3910 (3) | 0.4712 (3) | 0.92850 (11) | 0.0436 (5) | |
| N3 | 0.3677 (3) | 0.0203 (3) | 0.75019 (11) | 0.0710 (6) | |
| C10 | 0.5034 (4) | 0.0236 (3) | 0.88153 (14) | 0.0559 (6) | |
| C7 | 0.6983 (4) | 0.1636 (3) | 0.79320 (13) | 0.0578 (6) | |
| C8 | 0.5402 (4) | 0.1127 (4) | 0.73749 (14) | 0.0672 (7) | |
| C9 | 0.3534 (4) | −0.0212 (4) | 0.82157 (14) | 0.0673 (7) | |
| H2 | 1.316 (3) | 0.452 (2) | 0.8803 (12) | 0.048 (5)* | |
| H1 | 1.365 (3) | 0.390 (2) | 1.1064 (12) | 0.046 (6)* | |
| H3 | 0.483 (3) | −0.009 (3) | 0.9316 (13) | 0.063 (7)* | |
| H6 | 0.550 (4) | 0.142 (3) | 0.6864 (15) | 0.085 (8)* | |
| H5 | 0.812 (4) | 0.222 (3) | 0.7800 (13) | 0.069 (8)* | |
| H4 | 0.234 (4) | −0.079 (3) | 0.8314 (14) | 0.086 (9)* |
| O1 | 0.0404 (8) | 0.0544 (9) | 0.0408 (8) | −0.0085 (6) | 0.0005 (6) | −0.0010 (6) |
| N1 | 0.0434 (10) | 0.0573 (11) | 0.0424 (9) | −0.0076 (8) | −0.0004 (8) | −0.0024 (8) |
| N2 | 0.0453 (10) | 0.0571 (11) | 0.0434 (10) | −0.0091 (8) | 0.0001 (8) | −0.0006 (8) |
| C2 | 0.0336 (10) | 0.0411 (11) | 0.0419 (11) | 0.0023 (8) | −0.0017 (8) | −0.0022 (8) |
| C6 | 0.0395 (11) | 0.0451 (12) | 0.0425 (11) | −0.0004 (9) | 0.0001 (9) | −0.0044 (9) |
| C4 | 0.0389 (11) | 0.0445 (12) | 0.0367 (10) | 0.0018 (9) | −0.0027 (9) | −0.0033 (9) |
| C5 | 0.0362 (11) | 0.0428 (11) | 0.0463 (12) | −0.0027 (9) | 0.0026 (9) | −0.0004 (9) |
| C1 | 0.0423 (12) | 0.0521 (13) | 0.0383 (11) | −0.0018 (10) | 0.0012 (9) | 0.0029 (10) |
| C3 | 0.0399 (12) | 0.0509 (12) | 0.0377 (11) | 0.0003 (9) | −0.0054 (9) | −0.0013 (9) |
| N3 | 0.0657 (14) | 0.0925 (16) | 0.0512 (12) | −0.0132 (12) | −0.0083 (10) | −0.0080 (11) |
| C10 | 0.0573 (14) | 0.0641 (15) | 0.0452 (13) | −0.0159 (11) | 0.0012 (11) | 0.0002 (11) |
| C7 | 0.0552 (14) | 0.0711 (16) | 0.0464 (13) | −0.0106 (12) | 0.0028 (11) | 0.0003 (11) |
| C8 | 0.0718 (17) | 0.0867 (19) | 0.0414 (13) | −0.0059 (14) | −0.0007 (12) | 0.0022 (12) |
| C9 | 0.0559 (16) | 0.088 (2) | 0.0559 (16) | −0.0232 (14) | −0.0020 (12) | −0.0079 (13) |
| O1—C4 | 1.362 (2) | C1—H1 | 0.94 (2) |
| O1—C5 | 1.364 (2) | C3—C1i | 1.371 (3) |
| N1—C4 | 1.288 (2) | C3—H2 | 0.94 (2) |
| N1—N2 | 1.413 (2) | N3—C9 | 1.319 (3) |
| N2—C5 | 1.290 (2) | N3—C8 | 1.331 (3) |
| C2—C3 | 1.387 (3) | C10—C9 | 1.377 (3) |
| C2—C1 | 1.388 (3) | C10—H3 | 0.95 (2) |
| C2—C4 | 1.454 (3) | C7—C8 | 1.370 (3) |
| C6—C10 | 1.369 (3) | C7—H5 | 0.89 (2) |
| C6—C7 | 1.379 (3) | C8—H6 | 0.94 (3) |
| C6—C5 | 1.457 (3) | C9—H4 | 0.90 (3) |
| C1—C3i | 1.371 (3) | ||
| C4—O1—C5 | 102.87 (14) | C2—C1—H1 | 118.9 (13) |
| C4—N1—N2 | 106.44 (15) | C1i—C3—C2 | 119.80 (18) |
| C5—N2—N1 | 105.93 (16) | C1i—C3—H2 | 120.2 (12) |
| C3—C2—C1 | 119.71 (18) | C2—C3—H2 | 120.0 (12) |
| C3—C2—C4 | 120.80 (17) | C9—N3—C8 | 116.0 (2) |
| C1—C2—C4 | 119.48 (18) | C6—C10—C9 | 118.9 (2) |
| C10—C6—C7 | 117.7 (2) | C6—C10—H3 | 120.6 (14) |
| C10—C6—C5 | 120.01 (18) | C9—C10—H3 | 120.5 (14) |
| C7—C6—C5 | 122.2 (2) | C8—C7—C6 | 119.0 (2) |
| N1—C4—O1 | 112.27 (16) | C8—C7—H5 | 118.8 (15) |
| N1—C4—C2 | 128.76 (17) | C6—C7—H5 | 122.3 (15) |
| O1—C4—C2 | 118.96 (16) | N3—C8—C7 | 124.1 (2) |
| N2—C5—O1 | 112.49 (16) | N3—C8—H6 | 115.6 (16) |
| N2—C5—C6 | 128.40 (18) | C7—C8—H6 | 120.3 (16) |
| O1—C5—C6 | 119.09 (17) | N3—C9—C10 | 124.4 (2) |
| C3i—C1—C2 | 120.48 (19) | N3—C9—H4 | 117.0 (17) |
| C3i—C1—H1 | 120.5 (12) | C10—C9—H4 | 118.5 (17) |
| H··· | ||||
| C3—H2···N3ii | 0.94 (2) | 2.52 (2) | 3.407 (3) | 158.7 (16) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C3—H2⋯N3i | 0.94 (2) | 2.52 (2) | 3.407 (3) | 158.7 (16) |
Symmetry code: (i) .