Literature DB >> 21578964

(4R,5R,10S)-N-(4-Bromo-phen-yl)dehydro-abietamide.

Wen Gu1, Shifa Wang.   

Abstract

The title compound, C(26)H(32)BrNO, the ring with the amide unit possesses a chair conformation with the two methyl groups in axial positions..

Entities:  

Year:  2009        PMID: 21578964      PMCID: PMC2972169          DOI: 10.1107/S1600536809049575

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis and biological activity of dehydro­abietamide derivatives, see: Ntokos et al. (1973 ▶); Sepulveda et al. (2005 ▶); Fujita et al. (1991 ▶). For related structures see: Rao et al. (2006 ▶, 2007 ▶).

Experimental

Crystal data

C26H32BrNO M = 454.44 Orthorhombic, a = 5.9640 (12) Å b = 11.750 (2) Å c = 32.758 (7) Å V = 2295.6 (8) Å3 Z = 4 Mo Kα radiation μ = 1.81 mm−1 T = 293 K 0.20 × 0.10 × 0.10 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.714, T max = 0.840 4770 measured reflections 4143 independent reflections 1931 reflections with I > 2σ(I) R int = 0.063 3 standard reflections every 200 reflections intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.065 wR(F 2) = 0.133 S = 1.00 4143 reflections 257 parameters H-atom parameters constrained Δρmax = 0.32 e Å−3 Δρmin = −0.34 e Å−3 Absolute structure: Flack (1983 ▶), 1699 Friedel pairs Flack parameter: −0.003 (16) Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo,1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809049575/ng2678sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809049575/ng2678Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C26H32BrNODx = 1.315 Mg m3
Mr = 454.44Mo Kα radiation, λ = 0.71073 Å
Orthorhombic, P212121Cell parameters from 25 reflections
a = 5.9640 (12) Åθ = 10–13°
b = 11.750 (2) ŵ = 1.81 mm1
c = 32.758 (7) ÅT = 293 K
V = 2295.6 (8) Å3Block, colourless
Z = 40.20 × 0.10 × 0.10 mm
F(000) = 952
Enraf–Nonius CAD-4 diffractometer1931 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.063
graphiteθmax = 25.3°, θmin = 1.2°
ω/2θ scansh = 0→7
Absorption correction: ψ scan (North et al., 1968)k = 0→14
Tmin = 0.714, Tmax = 0.840l = −39→39
4770 measured reflections3 standard reflections every 200 reflections
4143 independent reflections intensity decay: 1%
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.065H-atom parameters constrained
wR(F2) = 0.133w = 1/[σ2(Fo2) + (0.048P)2] where P = (Fo2 + 2Fc2)/3
S = 1.00(Δ/σ)max < 0.001
4143 reflectionsΔρmax = 0.32 e Å3
257 parametersΔρmin = −0.34 e Å3
0 restraintsAbsolute structure: Flack (1983), 1699 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: −0.003 (16)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br0.81958 (18)0.68193 (7)0.09535 (2)0.0947 (4)
N0.8080 (10)1.0580 (5)−0.03060 (15)0.0532 (14)
H0A0.94071.0744−0.03900.064*
O0.4404 (8)1.1045 (4)−0.03859 (15)0.0639 (14)
C1−0.1942 (15)1.1802 (8)−0.2890 (2)0.109
H1A−0.27681.1527−0.31210.164*
H1B−0.19961.2618−0.28850.164*
H1C−0.25921.1506−0.26440.164*
C20.1482 (15)1.1731 (9)−0.3320 (2)0.122 (4)
H2A0.05511.1471−0.35400.183*
H2B0.29291.1377−0.33390.183*
H2C0.16501.2542−0.33370.183*
C30.0417 (14)1.1424 (8)−0.2921 (2)0.094 (3)
H3A0.03891.0591−0.29100.112*
C40.1823 (13)1.1816 (8)−0.2558 (2)0.069 (2)
C50.2310 (12)1.2951 (8)−0.2487 (2)0.067 (2)
H5A0.17771.3507−0.26650.081*
C60.3610 (11)1.3266 (6)−0.21477 (18)0.0565 (18)
H6A0.39511.4029−0.21050.068*
C70.4407 (11)1.2442 (6)−0.18691 (19)0.0487 (18)
C80.3956 (12)1.1298 (6)−0.1947 (2)0.055 (2)
C90.2662 (13)1.1021 (7)−0.2288 (2)0.064 (2)
H9A0.23451.0258−0.23350.077*
C100.5908 (10)1.2836 (5)−0.15146 (18)0.0399 (17)
C110.5900 (9)1.1879 (5)−0.11856 (17)0.0398 (15)
H11A0.43171.1781−0.11140.048*
C120.6589 (13)1.0742 (5)−0.13792 (19)0.0555 (19)
H12A0.79881.0831−0.15270.067*
H12B0.68041.0172−0.11690.067*
C130.4725 (14)1.0366 (6)−0.1672 (2)0.068 (2)
H13A0.52670.9738−0.18370.081*
H13B0.34591.0093−0.15140.081*
C140.4971 (11)1.3919 (5)−0.13126 (18)0.0486 (18)
H14A0.50921.4546−0.15040.058*
H14B0.33931.3806−0.12540.058*
C150.6185 (12)1.4242 (5)−0.09160 (19)0.0575 (19)
H15A0.77391.4421−0.09750.069*
H15B0.54911.4913−0.07990.069*
C160.6080 (11)1.3265 (6)−0.06107 (18)0.0535 (18)
H16A0.45271.3132−0.05370.064*
H16B0.68791.3483−0.03650.064*
C170.7083 (11)1.2159 (5)−0.0775 (2)0.0470 (18)
C180.8244 (11)1.3108 (6)−0.17050 (17)0.0611 (18)
H18A0.80411.3499−0.19600.092*
H18B0.90451.2411−0.17520.092*
H18C0.90831.3580−0.15210.092*
C190.9710 (10)1.2251 (6)−0.0809 (2)0.073 (3)
H19A1.00951.2840−0.09990.110*
H19B1.03101.1538−0.09020.110*
H19C1.03271.2429−0.05460.110*
C200.6416 (14)1.1207 (6)−0.04718 (19)0.0519 (18)
C210.7971 (13)0.9705 (5)−0.00191 (19)0.0477 (17)
C220.9833 (12)0.9004 (5)0.0016 (2)0.0580 (19)
H22A1.10670.9120−0.01530.070*
C230.9861 (13)0.8142 (7)0.0298 (2)0.063 (2)
H23A1.10960.76590.03110.075*
C240.8111 (16)0.7978 (6)0.05601 (19)0.061 (2)
C250.6259 (13)0.8674 (6)0.05292 (19)0.060 (2)
H25A0.50460.85600.07030.072*
C260.6176 (12)0.9541 (6)0.02438 (19)0.058 (2)
H26A0.49241.00100.02280.069*
U11U22U33U12U13U23
Br0.1378 (8)0.0749 (5)0.0715 (5)0.0229 (6)−0.0134 (6)0.0208 (5)
N0.032 (3)0.072 (4)0.055 (3)0.014 (4)0.001 (3)0.012 (3)
O0.032 (3)0.089 (4)0.070 (3)−0.006 (3)0.002 (3)0.028 (3)
C10.1090.1090.1090.0000.0000.000
C20.093 (7)0.220 (11)0.054 (5)0.027 (10)−0.007 (6)−0.031 (7)
C30.084 (7)0.140 (9)0.057 (5)0.005 (6)−0.012 (5)−0.021 (5)
C40.059 (5)0.100 (6)0.048 (4)0.005 (7)0.013 (4)−0.013 (5)
C50.048 (5)0.102 (7)0.051 (4)0.010 (5)−0.004 (4)0.019 (5)
C60.047 (5)0.073 (5)0.049 (4)−0.007 (5)0.005 (4)0.010 (4)
C70.034 (4)0.071 (5)0.041 (4)−0.004 (4)0.008 (4)0.010 (4)
C80.052 (5)0.063 (5)0.050 (4)−0.003 (4)−0.006 (4)−0.009 (4)
C90.062 (6)0.078 (5)0.053 (4)−0.007 (4)0.001 (4)−0.007 (4)
C100.027 (4)0.054 (4)0.039 (4)−0.001 (3)0.004 (3)0.001 (3)
C110.019 (3)0.055 (4)0.045 (3)−0.010 (4)0.000 (3)0.004 (4)
C120.060 (5)0.049 (4)0.058 (4)0.001 (5)0.003 (5)0.012 (3)
C130.092 (6)0.053 (5)0.058 (5)0.009 (5)−0.011 (5)0.005 (4)
C140.046 (4)0.051 (4)0.050 (4)−0.004 (4)0.006 (4)0.007 (3)
C150.066 (5)0.053 (4)0.053 (4)−0.003 (4)−0.003 (5)−0.003 (4)
C160.045 (5)0.064 (4)0.052 (4)−0.008 (4)0.000 (3)−0.007 (4)
C170.027 (4)0.057 (4)0.057 (4)−0.004 (4)0.001 (4)0.012 (3)
C180.042 (4)0.082 (5)0.059 (4)−0.003 (5)0.015 (4)0.021 (4)
C190.028 (4)0.113 (7)0.079 (6)−0.012 (5)−0.011 (4)0.018 (5)
C200.050 (5)0.060 (4)0.046 (4)−0.005 (5)−0.003 (4)−0.004 (3)
C210.047 (4)0.051 (4)0.045 (4)0.011 (4)−0.015 (4)−0.006 (3)
C220.052 (5)0.057 (5)0.066 (5)0.009 (4)−0.010 (4)0.003 (4)
C230.065 (6)0.058 (5)0.064 (5)0.017 (5)−0.015 (4)−0.006 (5)
C240.071 (5)0.058 (5)0.054 (4)0.014 (5)−0.005 (5)−0.009 (4)
C250.068 (6)0.064 (5)0.047 (4)−0.005 (5)0.005 (4)0.005 (4)
C260.051 (5)0.065 (5)0.057 (5)0.013 (4)0.006 (4)0.006 (4)
Br—C241.876 (7)C12—C131.534 (9)
N—C201.350 (8)C12—H12A0.9700
N—C211.394 (7)C12—H12B0.9700
N—H0A0.8600C13—H13A0.9700
O—C201.247 (7)C13—H13B0.9700
C1—C31.478 (11)C14—C151.535 (8)
C1—H1A0.9600C14—H14A0.9700
C1—H1B0.9600C14—H14B0.9700
C1—H1C0.9600C15—C161.524 (8)
C2—C31.498 (10)C15—H15A0.9700
C2—H2A0.9600C15—H15B0.9700
C2—H2B0.9600C16—C171.528 (9)
C2—H2C0.9600C16—H16A0.9700
C3—C41.525 (10)C16—H16B0.9700
C3—H3A0.9800C17—C201.548 (8)
C4—C91.382 (10)C17—C191.574 (8)
C4—C51.385 (10)C18—H18A0.9600
C5—C61.406 (9)C18—H18B0.9600
C5—H5A0.9300C18—H18C0.9600
C6—C71.413 (8)C19—H19A0.9600
C6—H6A0.9300C19—H19B0.9600
C7—C81.394 (8)C19—H19C0.9600
C7—C101.538 (9)C21—C221.387 (8)
C8—C91.396 (8)C21—C261.388 (8)
C8—C131.489 (9)C22—C231.372 (9)
C9—H9A0.9300C22—H22A0.9300
C10—C141.540 (8)C23—C241.365 (9)
C10—C111.557 (8)C23—H23A0.9300
C10—C181.559 (8)C24—C251.378 (9)
C11—C121.535 (8)C25—C261.383 (8)
C11—C171.555 (8)C25—H25A0.9300
C11—H11A0.9800C26—H26A0.9300
C20—N—C21129.7 (6)C8—C13—H13B109.0
C20—N—H0A115.1C12—C13—H13B109.0
C21—N—H0A115.1H13A—C13—H13B107.8
C3—C1—H1A109.5C15—C14—C10113.4 (5)
C3—C1—H1B109.5C15—C14—H14A108.9
H1A—C1—H1B109.5C10—C14—H14A108.9
C3—C1—H1C109.5C15—C14—H14B108.9
H1A—C1—H1C109.5C10—C14—H14B108.9
H1B—C1—H1C109.5H14A—C14—H14B107.7
C3—C2—H2A109.5C16—C15—C14110.5 (5)
C3—C2—H2B109.5C16—C15—H15A109.6
H2A—C2—H2B109.5C14—C15—H15A109.6
C3—C2—H2C109.5C16—C15—H15B109.6
H2A—C2—H2C109.5C14—C15—H15B109.6
H2B—C2—H2C109.5H15A—C15—H15B108.1
C1—C3—C2113.0 (8)C15—C16—C17113.1 (5)
C1—C3—C4112.3 (7)C15—C16—H16A108.9
C2—C3—C4112.0 (7)C17—C16—H16A108.9
C1—C3—H3A106.3C15—C16—H16B108.9
C2—C3—H3A106.3C17—C16—H16B108.9
C4—C3—H3A106.3H16A—C16—H16B107.8
C9—C4—C5117.9 (7)C16—C17—C20106.7 (5)
C9—C4—C3119.7 (8)C16—C17—C11107.9 (5)
C5—C4—C3122.5 (8)C20—C17—C11106.6 (5)
C4—C5—C6120.1 (7)C16—C17—C19110.9 (6)
C4—C5—H5A119.9C20—C17—C19110.5 (6)
C6—C5—H5A119.9C11—C17—C19113.9 (5)
C5—C6—C7121.1 (7)C10—C18—H18A109.5
C5—C6—H6A119.4C10—C18—H18B109.5
C7—C6—H6A119.4H18A—C18—H18B109.5
C8—C7—C6118.6 (6)C10—C18—H18C109.5
C8—C7—C10122.7 (6)H18A—C18—H18C109.5
C6—C7—C10118.5 (6)H18B—C18—H18C109.5
C7—C8—C9118.5 (7)C17—C19—H19A109.5
C7—C8—C13122.7 (6)C17—C19—H19B109.5
C9—C8—C13118.8 (7)H19A—C19—H19B109.5
C4—C9—C8123.8 (7)C17—C19—H19C109.5
C4—C9—H9A118.1H19A—C19—H19C109.5
C8—C9—H9A118.1H19B—C19—H19C109.5
C7—C10—C14111.2 (5)O—C20—N122.2 (7)
C7—C10—C11107.7 (5)O—C20—C17120.1 (7)
C14—C10—C11107.3 (5)N—C20—C17117.6 (7)
C7—C10—C18106.3 (5)C22—C21—C26118.9 (6)
C14—C10—C18109.0 (5)C22—C21—N117.1 (7)
C11—C10—C18115.3 (5)C26—C21—N123.9 (7)
C12—C11—C17114.8 (5)C23—C22—C21120.2 (7)
C12—C11—C10110.0 (5)C23—C22—H22A119.9
C17—C11—C10116.4 (5)C21—C22—H22A119.9
C12—C11—H11A104.7C24—C23—C22121.2 (7)
C17—C11—H11A104.7C24—C23—H23A119.4
C10—C11—H11A104.7C22—C23—H23A119.4
C13—C12—C11108.4 (6)C23—C24—C25118.9 (6)
C13—C12—H12A110.0C23—C24—Br120.9 (6)
C11—C12—H12A110.0C25—C24—Br120.2 (6)
C13—C12—H12B110.0C24—C25—C26121.0 (7)
C11—C12—H12B110.0C24—C25—H25A119.5
H12A—C12—H12B108.4C26—C25—H25A119.5
C8—C13—C12112.9 (6)C25—C26—C21119.7 (7)
C8—C13—H13A109.0C25—C26—H26A120.2
C12—C13—H13A109.0C21—C26—H26A120.2
C1—C3—C4—C9113.1 (9)C7—C10—C14—C15170.8 (5)
C2—C3—C4—C9−118.5 (9)C11—C10—C14—C1553.2 (6)
C1—C3—C4—C5−67.0 (11)C18—C10—C14—C15−72.3 (6)
C2—C3—C4—C561.4 (11)C10—C14—C15—C16−57.3 (7)
C9—C4—C5—C6−0.3 (11)C14—C15—C16—C1757.7 (7)
C3—C4—C5—C6179.8 (7)C15—C16—C17—C20−168.5 (6)
C4—C5—C6—C7−1.2 (10)C15—C16—C17—C11−54.3 (7)
C5—C6—C7—C82.6 (10)C15—C16—C17—C1971.0 (7)
C5—C6—C7—C10177.3 (6)C12—C11—C17—C16−175.8 (5)
C6—C7—C8—C9−2.5 (10)C10—C11—C17—C1653.7 (7)
C10—C7—C8—C9−176.9 (6)C12—C11—C17—C20−61.5 (7)
C6—C7—C8—C13179.9 (6)C10—C11—C17—C20168.0 (5)
C10—C7—C8—C135.4 (11)C12—C11—C17—C1960.7 (7)
C5—C4—C9—C80.4 (11)C10—C11—C17—C19−69.9 (7)
C3—C4—C9—C8−179.7 (7)C21—N—C20—O−1.7 (11)
C7—C8—C9—C41.0 (11)C21—N—C20—C17177.8 (6)
C13—C8—C9—C4178.8 (7)C16—C17—C20—O55.3 (8)
C8—C7—C10—C14−141.0 (6)C11—C17—C20—O−59.8 (8)
C6—C7—C10—C1444.5 (7)C19—C17—C20—O176.0 (6)
C8—C7—C10—C11−23.7 (8)C16—C17—C20—N−124.2 (6)
C6—C7—C10—C11161.9 (5)C11—C17—C20—N120.7 (6)
C8—C7—C10—C18100.4 (7)C19—C17—C20—N−3.5 (8)
C6—C7—C10—C18−74.0 (8)C20—N—C21—C22162.9 (6)
C7—C10—C11—C1254.4 (7)C20—N—C21—C26−20.7 (10)
C14—C10—C11—C12174.2 (5)C26—C21—C22—C231.9 (10)
C18—C10—C11—C12−64.0 (7)N—C21—C22—C23178.6 (6)
C7—C10—C11—C17−172.8 (5)C21—C22—C23—C24−2.5 (11)
C14—C10—C11—C17−53.0 (7)C22—C23—C24—C252.1 (11)
C18—C10—C11—C1768.8 (7)C22—C23—C24—Br−178.5 (5)
C17—C11—C12—C13158.1 (5)C23—C24—C25—C26−1.3 (11)
C10—C11—C12—C13−68.2 (6)Br—C24—C25—C26179.3 (5)
C7—C8—C13—C12−17.0 (10)C24—C25—C26—C210.8 (10)
C9—C8—C13—C12165.4 (6)C22—C21—C26—C25−1.1 (10)
C11—C12—C13—C847.0 (7)N—C21—C26—C25−177.5 (6)
  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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Authors:  Beatriz Sepúlveda; Luis Astudillo; Jaime A Rodríguez; Tania Yáñez; Cristina Theoduloz; Guillermo Schmeda-Hirschmann
Journal:  Pharmacol Res       Date:  2005-08-24       Impact factor: 7.658

3.  New hypocholesterolemic abietamide derivatives. II. Synthesis and hypocholesterolemic activity of N-phenyl-delta 8-dihydroabietamides.

Authors:  Y Fujita; Y Yoshikuni; T Sotomatsu; T Mori; T Ozaki; K Sempuku; A Ogino; M Kise; H Enomoto
Journal:  Chem Pharm Bull (Tokyo)       Date:  1991-05       Impact factor: 1.645

  3 in total
  1 in total

1.  2-Chloro-N-{5-[(4R,5R,10S)-dehydro-abiet-4-yl]-1,3,4-thia-diazol-2-yl}benzamide.

Authors:  Qijin Mo; Wengui Duan; Xianli Ma; Jianxin Huang; Zhen Ma
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-03-09
  1 in total

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