Literature DB >> 21578936

(E)-N'-(3,4-Dimethoxy-benzyl-idene)-2-(8-quinol-yloxy)acetohydrazide-methanol-water (1/1/1).

Zhan-Ling Ma1.   

Abstract

In the title compound, C(20)H(19)N(3)O(4)·CH(4)O·H(2)O, the Schiff base mol-ecule is almost planar, with a dihedral angle of 1.2 (1)° between the benzene ring and the quinoline ring system. An intra-molecular N-H⋯O hydrogen bond generates an S(6) ring. In the crystal, the methanol and water solvent mol-ecules are linked to the Schiff base mol-ecule via N-H⋯O, O-H⋯O, O-H⋯N and O-H⋯(O,N) hydrogen bonds.

Entities:  

Year:  2009        PMID: 21578936      PMCID: PMC2972133          DOI: 10.1107/S1600536809051034

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the applications of 8-hydroxy­quinoline and its derivatives, see: Bratzel et al. (1972 ▶); Karmakar et al. (2007 ▶); Pierre et al. (2003 ▶). For a Schiff base compound containing 2,5-dimethoxy­benzaldehyde, see: Wang et al. (2009 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C20H19N3O4·CH4O·H2O M = 415.44 Triclinic, a = 8.807 (2) Å b = 10.071 (3) Å c = 13.121 (3) Å α = 68.702 (4)° β = 74.552 (3)° γ = 82.458 (5)° V = 1044.4 (4) Å3 Z = 2 Mo Kα radiation μ = 0.10 mm−1 T = 295 K 0.21 × 0.18 × 0.16 mm

Data collection

Siemens SMART CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.980, T max = 0.985 5612 measured reflections 3676 independent reflections 1571 reflections with I > 2σ(I) R int = 0.035

Refinement

R[F 2 > 2σ(F 2)] = 0.052 wR(F 2) = 0.126 S = 1.01 3676 reflections 273 parameters H-atom parameters constrained Δρmax = 0.19 e Å−3 Δρmin = −0.17 e Å−3 Data collection: SMART (Siemens, 1996 ▶); cell refinement: SAINT (Siemens, 1996 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809051034/hb5253sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809051034/hb5253Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H19N3O4·CH4O·H2OZ = 2
Mr = 415.44F(000) = 440
Triclinic, P1Dx = 1.321 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.807 (2) ÅCell parameters from 583 reflections
b = 10.071 (3) Åθ = 2.6–22.5°
c = 13.121 (3) ŵ = 0.10 mm1
α = 68.702 (4)°T = 295 K
β = 74.552 (3)°Block, colourless
γ = 82.458 (5)°0.21 × 0.18 × 0.16 mm
V = 1044.4 (4) Å3
Siemens SMART CCD diffractometer3676 independent reflections
Radiation source: fine-focus sealed tube1571 reflections with I > 2σ(I)
graphiteRint = 0.035
φ and ω scansθmax = 25.1°, θmin = 1.7°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −10→10
Tmin = 0.980, Tmax = 0.985k = −10→11
5612 measured reflectionsl = −15→15
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.052H-atom parameters constrained
wR(F2) = 0.126w = 1/[σ2(Fo2) + (0.0363P)2 + 0.0145P] where P = (Fo2 + 2Fc2)/3
S = 1.00(Δ/σ)max < 0.001
3676 reflectionsΔρmax = 0.19 e Å3
273 parametersΔρmin = −0.16 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0063 (11)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.9264 (2)0.2984 (2)1.08007 (16)0.0553 (6)
O20.7983 (3)0.3641 (2)0.83136 (18)0.0739 (7)
O30.3497 (2)0.9140 (2)0.60039 (16)0.0594 (6)
O40.2433 (3)1.1261 (2)0.66550 (17)0.0672 (7)
O50.7438 (3)0.5521 (2)0.15037 (15)0.0700 (7)
H210.79700.48030.18340.105*
H220.64790.53510.18410.105*
O60.5689 (3)0.4737 (3)0.7121 (2)0.0931 (9)
H60.63060.46280.75190.140*
N10.9468 (3)0.3418 (3)1.2638 (2)0.0573 (8)
N20.7469 (3)0.4881 (3)0.95154 (19)0.0507 (7)
H80.76000.49501.01210.061*
N30.6533 (3)0.5866 (3)0.88784 (19)0.0517 (7)
C10.9595 (4)0.3630 (4)1.3543 (3)0.0787 (12)
H10.91080.44491.36750.094*
C21.0419 (5)0.2701 (4)1.4323 (3)0.0831 (12)
H21.04700.29081.49480.100*
C31.1133 (4)0.1508 (4)1.4153 (3)0.0739 (11)
H31.16860.08831.46600.089*
C41.1039 (4)0.1214 (4)1.3206 (3)0.0542 (9)
C51.1758 (4)−0.0007 (4)1.2967 (3)0.0676 (10)
H51.2304−0.06751.34590.081*
C61.1660 (4)−0.0212 (4)1.2027 (3)0.0737 (11)
H6A1.2138−0.10231.18780.088*
C71.0845 (4)0.0785 (4)1.1268 (3)0.0627 (10)
H71.08040.06361.06170.075*
C81.0114 (4)0.1970 (3)1.1484 (3)0.0506 (8)
C91.0192 (3)0.2217 (3)1.2462 (2)0.0487 (8)
C100.9210 (4)0.2751 (3)0.9812 (2)0.0556 (9)
H10A0.88370.18021.00170.067*
H10B1.02690.27880.93380.067*
C110.8163 (4)0.3817 (4)0.9153 (3)0.0541 (9)
C120.5916 (4)0.6888 (3)0.9221 (2)0.0531 (9)
H120.60810.69190.98830.064*
C130.4960 (4)0.8004 (3)0.8595 (2)0.0481 (8)
C140.4684 (3)0.7989 (3)0.7596 (2)0.0469 (8)
H140.50830.72290.73480.056*
C150.3838 (4)0.9073 (3)0.6981 (2)0.0486 (8)
C160.3235 (4)1.0225 (3)0.7344 (3)0.0520 (9)
C170.3500 (4)1.0262 (3)0.8314 (3)0.0613 (10)
H170.31111.10310.85530.074*
C180.4354 (4)0.9145 (4)0.8945 (3)0.0590 (9)
H180.45170.91700.96100.071*
C190.4215 (4)0.8044 (3)0.5551 (2)0.0688 (11)
H19A0.53390.80390.54330.103*
H19B0.39500.82260.48470.103*
H19C0.38360.71340.60710.103*
C200.1775 (5)1.2441 (4)0.6990 (3)0.0983 (14)
H20A0.09731.21230.76750.147*
H20B0.13191.31240.64110.147*
H20C0.25861.28770.71110.147*
C210.6316 (5)0.4092 (5)0.6337 (3)0.1262 (19)
H21A0.73830.43720.59790.189*
H21B0.57030.43780.57810.189*
H21C0.63010.30760.67000.189*
U11U22U33U12U13U23
O10.0614 (15)0.0611 (15)0.0474 (12)0.0089 (12)−0.0221 (12)−0.0206 (11)
O20.092 (2)0.0846 (18)0.0659 (15)0.0131 (14)−0.0410 (14)−0.0398 (14)
O30.0733 (17)0.0556 (14)0.0531 (14)0.0098 (12)−0.0224 (12)−0.0219 (11)
O40.0853 (18)0.0579 (15)0.0612 (14)0.0245 (13)−0.0244 (13)−0.0280 (12)
O50.0792 (17)0.0696 (16)0.0639 (14)0.0069 (13)−0.0289 (13)−0.0207 (12)
O60.089 (2)0.124 (2)0.095 (2)0.0277 (17)−0.0455 (16)−0.0652 (18)
N10.065 (2)0.0573 (19)0.0494 (17)0.0004 (15)−0.0156 (15)−0.0175 (14)
N20.0532 (18)0.0560 (18)0.0441 (15)0.0010 (15)−0.0155 (14)−0.0167 (14)
N30.0538 (18)0.0518 (17)0.0472 (16)−0.0010 (15)−0.0170 (14)−0.0110 (14)
C10.100 (3)0.078 (3)0.067 (2)0.013 (2)−0.032 (2)−0.032 (2)
C20.109 (3)0.093 (3)0.056 (2)0.006 (3)−0.041 (2)−0.024 (2)
C30.072 (3)0.075 (3)0.069 (3)−0.006 (2)−0.032 (2)−0.008 (2)
C40.048 (2)0.061 (2)0.048 (2)−0.0069 (19)−0.0186 (18)−0.0063 (18)
C50.057 (2)0.062 (3)0.078 (3)0.007 (2)−0.028 (2)−0.011 (2)
C60.076 (3)0.064 (3)0.087 (3)0.018 (2)−0.032 (2)−0.032 (2)
C70.062 (2)0.062 (2)0.066 (2)0.007 (2)−0.022 (2)−0.023 (2)
C80.043 (2)0.058 (2)0.049 (2)−0.0002 (18)−0.0127 (17)−0.0151 (18)
C90.039 (2)0.052 (2)0.049 (2)−0.0065 (17)−0.0088 (17)−0.0100 (17)
C100.057 (2)0.059 (2)0.057 (2)0.0000 (18)−0.0172 (18)−0.0246 (17)
C110.055 (2)0.058 (2)0.050 (2)−0.0028 (19)−0.0158 (18)−0.0168 (18)
C120.056 (2)0.056 (2)0.047 (2)−0.0072 (19)−0.0125 (18)−0.0154 (18)
C130.050 (2)0.048 (2)0.0437 (19)−0.0044 (17)−0.0084 (17)−0.0136 (16)
C140.051 (2)0.045 (2)0.0432 (19)−0.0037 (17)−0.0080 (17)−0.0161 (16)
C150.050 (2)0.053 (2)0.0426 (19)−0.0046 (17)−0.0089 (17)−0.0161 (17)
C160.053 (2)0.052 (2)0.046 (2)0.0033 (18)−0.0085 (17)−0.0154 (17)
C170.068 (3)0.058 (2)0.059 (2)0.006 (2)−0.013 (2)−0.0263 (19)
C180.069 (3)0.065 (2)0.049 (2)−0.002 (2)−0.0169 (19)−0.0246 (19)
C190.091 (3)0.067 (2)0.061 (2)0.014 (2)−0.028 (2)−0.036 (2)
C200.145 (4)0.072 (3)0.105 (3)0.045 (3)−0.066 (3)−0.053 (2)
C210.136 (4)0.169 (5)0.117 (4)0.050 (4)−0.056 (3)−0.100 (4)
O1—C81.378 (3)C6—H6A0.9300
O1—C101.413 (3)C7—C81.366 (4)
O2—C111.230 (3)C7—H70.9300
O3—C151.369 (3)C8—C91.413 (4)
O3—C191.437 (3)C10—C111.497 (4)
O4—C161.366 (3)C10—H10A0.9700
O4—C201.416 (3)C10—H10B0.9700
O5—H210.8500C12—C131.448 (4)
O5—H220.8499C12—H120.9300
O6—C211.369 (4)C13—C181.382 (4)
O6—H60.8200C13—C141.401 (4)
N1—C11.315 (4)C14—C151.366 (4)
N1—C91.359 (3)C14—H140.9300
N2—C111.339 (3)C15—C161.400 (4)
N2—N31.383 (3)C16—C171.368 (4)
N2—H80.8600C17—C181.397 (4)
N3—C121.271 (3)C17—H170.9300
C1—C21.403 (5)C18—H180.9300
C1—H10.9300C19—H19A0.9600
C2—C31.346 (4)C19—H19B0.9600
C2—H20.9300C19—H19C0.9600
C3—C41.403 (4)C20—H20A0.9600
C3—H30.9300C20—H20B0.9600
C4—C51.408 (4)C20—H20C0.9600
C4—C91.415 (4)C21—H21A0.9600
C5—C61.347 (4)C21—H21B0.9600
C5—H50.9300C21—H21C0.9600
C6—C71.407 (4)
C8—O1—C10115.6 (2)O2—C11—N2124.2 (3)
C15—O3—C19116.5 (2)O2—C11—C10117.2 (3)
C16—O4—C20117.6 (2)N2—C11—C10118.7 (3)
H21—O5—H22105.8N3—C12—C13120.9 (3)
C21—O6—H6109.5N3—C12—H12119.5
C1—N1—C9116.9 (3)C13—C12—H12119.5
C11—N2—N3117.4 (3)C18—C13—C14118.3 (3)
C11—N2—H8121.3C18—C13—C12120.5 (3)
N3—N2—H8121.3C14—C13—C12121.1 (3)
C12—N3—N2116.4 (3)C15—C14—C13121.0 (3)
N1—C1—C2124.2 (3)C15—C14—H14119.5
N1—C1—H1117.9C13—C14—H14119.5
C2—C1—H1117.9C14—C15—O3125.0 (3)
C3—C2—C1119.1 (3)C14—C15—C16120.1 (3)
C3—C2—H2120.4O3—C15—C16114.9 (3)
C1—C2—H2120.4O4—C16—C17125.0 (3)
C2—C3—C4119.6 (3)O4—C16—C15115.2 (3)
C2—C3—H3120.2C17—C16—C15119.8 (3)
C4—C3—H3120.2C16—C17—C18120.0 (3)
C3—C4—C5123.1 (3)C16—C17—H17120.0
C3—C4—C9117.3 (3)C18—C17—H17120.0
C5—C4—C9119.6 (3)C13—C18—C17120.8 (3)
C6—C5—C4120.3 (3)C13—C18—H18119.6
C6—C5—H5119.9C17—C18—H18119.6
C4—C5—H5119.9O3—C19—H19A109.5
C5—C6—C7120.9 (3)O3—C19—H19B109.5
C5—C6—H6A119.5H19A—C19—H19B109.5
C7—C6—H6A119.5O3—C19—H19C109.5
C8—C7—C6120.3 (3)H19A—C19—H19C109.5
C8—C7—H7119.9H19B—C19—H19C109.5
C6—C7—H7119.9O4—C20—H20A109.5
C7—C8—O1124.2 (3)O4—C20—H20B109.5
C7—C8—C9120.2 (3)H20A—C20—H20B109.5
O1—C8—C9115.6 (3)O4—C20—H20C109.5
N1—C9—C8118.5 (3)H20A—C20—H20C109.5
N1—C9—C4122.9 (3)H20B—C20—H20C109.5
C8—C9—C4118.6 (3)O6—C21—H21A109.5
O1—C10—C11113.2 (3)O6—C21—H21B109.5
O1—C10—H10A108.9H21A—C21—H21B109.5
C11—C10—H10A108.9O6—C21—H21C109.5
O1—C10—H10B108.9H21A—C21—H21C109.5
C11—C10—H10B108.9H21B—C21—H21C109.5
H10A—C10—H10B107.8
D—H···AD—HH···AD···AD—H···A
N2—H8···O10.862.352.698 (3)105
N2—H8···O5i0.862.062.899 (3)165
O6—H6···O20.821.982.756 (4)156
O6—H6···N30.822.583.194 (4)133
O5—H21···N1ii0.852.002.834 (4)168
O5—H22···O6iii0.852.022.847 (4)164
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N2—H8⋯O10.862.352.698 (3)105
N2—H8⋯O5i 0.862.062.899 (3)165
O6—H6⋯O20.821.982.756 (4)156
O6—H6⋯N30.822.583.194 (4)133
O5—H21⋯N1ii 0.852.002.834 (4)168
O5—H22⋯O6iii 0.852.022.847 (4)164

Symmetry codes: (i) ; (ii) ; (iii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

Review 2.  Hydroxyquinolines as iron chelators.

Authors:  J-L Pierre; P Baret; G Serratrice
Journal:  Curr Med Chem       Date:  2003-06       Impact factor: 4.530

3.  (E)-N'-(2,5-Dimethoxy-benzyl-idene)-2-(8-quinol-yloxy)acetohydrazide methanol solvate.

Authors:  Shou-Yu Wang; Liang Yuan; Liang Xu; Zhen Zhang; Yun-Peng Diao; De-Cheng Lv
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-04-30
  3 in total

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