Literature DB >> 21578935

N-(Phenyl-sulfon-yl)-l-asparagine.

Muhammad Nadeem Arshad, Hafiz Mubashar-Ur-Rehman, Islam Ullah Khan, Muhammad Shafiq, Kong Mun Lo.   

Abstract

In the title compound, C(10)H(12)N(2)O(5)S, one of the sulfonyl O atoms is hydrogen bonded to the amido N atom of an adjacent mol-ecule. There is also a weak hydrogen-bonding inter-action between the other sulfonyl O atom and the secondary amino N atom. In addition, the amido O atom is also hydrogen bonded to a carboxyl O atom. These hydrogen-bonding inter-actions give rise to a layer structure parallel to the bc plane.

Entities:  

Year:  2009        PMID: 21578935      PMCID: PMC2972182          DOI: 10.1107/S1600536809050247

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related compounds, see: Koroniak et al. (2003 ▶); Arshad et al. (2008 ▶, 2009 ▶).

Experimental

Crystal data

C10H12N2O5S M = 272.28 Monoclinic, a = 10.5479 (6) Å b = 5.1587 (3) Å c = 11.0157 (7) Å β = 92.011 (3)° V = 599.03 (6) Å3 Z = 2 Mo Kα radiation μ = 0.29 mm−1 T = 296 K 0.25 × 0.21 × 0.13 mm

Data collection

Bruker APEXII diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.932, T max = 0.964 6832 measured reflections 2732 independent reflections 2518 reflections with I > 2σ(I) R int = 0.023

Refinement

R[F 2 > 2σ(F 2)] = 0.029 wR(F 2) = 0.076 S = 1.06 2732 reflections 176 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.33 e Å−3 Δρmin = −0.16 e Å−3 Absolute structure: Flack (1983 ▶), 1187 Friedel pairs Flack parameter: −0.01 (6) Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809050247/om2295sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809050247/om2295Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H12N2O5SF(000) = 284
Mr = 272.28Dx = 1.510 Mg m3
Monoclinic, P21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ybCell parameters from 3825 reflections
a = 10.5479 (6) Åθ = 2.6–27.4°
b = 5.1587 (3) ŵ = 0.29 mm1
c = 11.0157 (7) ÅT = 296 K
β = 92.011 (3)°Block, colorless
V = 599.03 (6) Å30.25 × 0.21 × 0.13 mm
Z = 2
Bruker APEXII diffractometer2732 independent reflections
Radiation source: fine-focus sealed tube2518 reflections with I > 2σ(I)
graphiteRint = 0.023
ω scansθmax = 27.6°, θmin = 2.6°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −13→13
Tmin = 0.932, Tmax = 0.964k = −6→6
6832 measured reflectionsl = −14→14
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.029H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.076w = 1/[σ2(Fo2) + (0.0464P)2 + 0.0133P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max < 0.001
2732 reflectionsΔρmax = 0.33 e Å3
176 parametersΔρmin = −0.16 e Å3
1 restraintAbsolute structure: Flack (1983), 1187 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: −0.01 (6)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.91282 (16)0.8736 (3)0.28950 (15)0.0323 (4)
C20.93349 (19)0.7209 (4)0.18909 (17)0.0411 (4)
H20.87950.58380.16880.049*
C31.03713 (19)0.7776 (5)0.11920 (19)0.0503 (5)
H31.05340.67660.05160.060*
C41.11535 (19)0.9813 (5)0.1493 (2)0.0499 (5)
H41.18371.01870.10120.060*
C51.09413 (19)1.1314 (5)0.2501 (2)0.0517 (5)
H51.14831.26830.27000.062*
C60.99250 (18)1.0783 (4)0.32109 (19)0.0439 (4)
H60.97751.17830.38930.053*
C70.59899 (15)0.9058 (3)0.19546 (14)0.0279 (3)
H70.61110.71830.18730.034*
C80.64948 (16)1.0412 (3)0.08415 (14)0.0311 (3)
C90.45593 (16)0.9649 (3)0.20037 (16)0.0333 (4)
H9A0.44441.13700.23360.040*
H9B0.41870.96300.11860.040*
C100.38860 (15)0.7715 (3)0.27662 (15)0.0315 (4)
H1A0.379 (3)1.000 (7)0.406 (3)0.073 (9)*
H2A0.312 (3)0.722 (7)0.433 (3)0.090 (10)*
N10.66143 (14)0.9939 (3)0.30846 (13)0.0300 (3)
H1B0.6757 (17)1.141 (5)0.3130 (17)0.027 (5)*
N20.3616 (2)0.8376 (5)0.38858 (16)0.0575 (5)
O10.73791 (14)0.5586 (3)0.36312 (13)0.0448 (3)
O20.79671 (14)0.9371 (3)0.49048 (11)0.0458 (3)
O30.70376 (15)1.2446 (3)0.08654 (13)0.0492 (4)
O40.61999 (16)0.9065 (3)−0.01409 (11)0.0485 (4)
H4A0.64030.9880−0.07430.073*
O60.35901 (14)0.5579 (3)0.23573 (12)0.0430 (3)
S10.77553 (4)0.82468 (8)0.37280 (3)0.03153 (11)
U11U22U33U12U13U23
C10.0338 (7)0.0321 (10)0.0308 (8)0.0042 (6)−0.0010 (6)0.0009 (6)
C20.0425 (9)0.0410 (10)0.0399 (10)0.0005 (8)0.0027 (8)−0.0079 (8)
C30.0454 (10)0.0652 (15)0.0407 (10)0.0089 (10)0.0084 (8)−0.0096 (10)
C40.0310 (9)0.0658 (14)0.0532 (12)0.0041 (9)0.0049 (8)0.0057 (10)
C50.0355 (10)0.0530 (13)0.0662 (14)−0.0071 (9)−0.0025 (9)−0.0011 (11)
C60.0412 (9)0.0438 (11)0.0466 (11)−0.0015 (8)−0.0012 (8)−0.0101 (9)
C70.0340 (8)0.0237 (7)0.0263 (8)−0.0001 (6)0.0039 (6)0.0008 (6)
C80.0357 (8)0.0312 (9)0.0268 (8)−0.0011 (7)0.0059 (7)0.0014 (6)
C90.0340 (8)0.0315 (9)0.0346 (9)0.0006 (7)0.0041 (7)0.0053 (7)
C100.0326 (8)0.0314 (10)0.0306 (8)0.0005 (6)0.0049 (6)0.0018 (6)
N10.0365 (7)0.0248 (7)0.0287 (7)0.0013 (6)0.0026 (6)−0.0003 (6)
N20.0810 (13)0.0565 (11)0.0363 (9)−0.0212 (12)0.0216 (8)−0.0110 (10)
O10.0570 (8)0.0306 (7)0.0472 (8)0.0007 (6)0.0059 (6)0.0108 (6)
O20.0567 (8)0.0564 (8)0.0244 (6)0.0107 (7)0.0006 (6)−0.0009 (6)
O30.0665 (9)0.0457 (9)0.0357 (7)−0.0255 (7)0.0061 (6)0.0041 (6)
O40.0820 (10)0.0388 (7)0.0255 (6)−0.0119 (7)0.0105 (6)−0.0018 (5)
O60.0593 (8)0.0361 (7)0.0345 (6)−0.0074 (6)0.0152 (6)−0.0019 (5)
S10.0406 (2)0.0300 (2)0.02406 (18)0.00257 (18)0.00257 (14)0.00307 (17)
C1—C21.382 (3)C7—H70.9800
C1—C61.386 (3)C8—O31.195 (2)
C1—S11.7596 (18)C8—O41.314 (2)
C2—C31.390 (3)C9—C101.499 (2)
C2—H20.9300C9—H9A0.9700
C3—C41.370 (3)C9—H9B0.9700
C3—H30.9300C10—O61.226 (2)
C4—C51.378 (3)C10—N21.320 (2)
C4—H40.9300N1—S11.6289 (15)
C5—C61.377 (3)N1—H1B0.77 (2)
C5—H50.9300N2—H1A0.88 (4)
C6—H60.9300N2—H2A0.95 (3)
C7—N11.460 (2)O1—S11.4319 (14)
C7—C81.523 (2)O2—S11.4304 (14)
C7—C91.542 (2)O4—H4A0.8200
C2—C1—C6121.60 (18)O3—C8—C7124.44 (15)
C2—C1—S1119.45 (14)O4—C8—C7109.93 (14)
C6—C1—S1118.76 (14)C10—C9—C7111.80 (14)
C1—C2—C3118.21 (19)C10—C9—H9A109.3
C1—C2—H2120.9C7—C9—H9A109.3
C3—C2—H2120.9C10—C9—H9B109.3
C4—C3—C2120.39 (19)C7—C9—H9B109.3
C4—C3—H3119.8H9A—C9—H9B107.9
C2—C3—H3119.8O6—C10—N2120.99 (18)
C3—C4—C5120.86 (19)O6—C10—C9120.76 (16)
C3—C4—H4119.6N2—C10—C9118.24 (18)
C5—C4—H4119.6C7—N1—S1120.55 (12)
C6—C5—C4119.82 (19)C7—N1—H1B116.2 (14)
C6—C5—H5120.1S1—N1—H1B110.9 (14)
C4—C5—H5120.1C10—N2—H1A113.9 (19)
C5—C6—C1119.11 (18)C10—N2—H2A117.8 (19)
C5—C6—H6120.4H1A—N2—H2A127 (3)
C1—C6—H6120.4C8—O4—H4A109.5
N1—C7—C8112.54 (13)O2—S1—O1119.35 (9)
N1—C7—C9108.73 (13)O2—S1—N1105.46 (8)
C8—C7—C9107.92 (13)O1—S1—N1106.44 (8)
N1—C7—H7109.2O2—S1—C1108.01 (9)
C8—C7—H7109.2O1—S1—C1109.25 (8)
C9—C7—H7109.2N1—S1—C1107.77 (8)
O3—C8—O4125.58 (16)
C6—C1—C2—C3−0.1 (3)C7—C9—C10—O6−79.6 (2)
S1—C1—C2—C3174.80 (16)C7—C9—C10—N2100.7 (2)
C1—C2—C3—C4−0.6 (3)C8—C7—N1—S1−99.21 (15)
C2—C3—C4—C50.9 (3)C9—C7—N1—S1141.28 (13)
C3—C4—C5—C6−0.6 (3)C7—N1—S1—O2−168.94 (12)
C4—C5—C6—C1−0.1 (3)C7—N1—S1—O1−41.22 (15)
C2—C1—C6—C50.5 (3)C7—N1—S1—C175.87 (14)
S1—C1—C6—C5−174.49 (16)C2—C1—S1—O2160.50 (14)
N1—C7—C8—O3−21.2 (2)C6—C1—S1—O2−24.43 (17)
C9—C7—C8—O398.8 (2)C2—C1—S1—O129.25 (17)
N1—C7—C8—O4161.31 (14)C6—C1—S1—O1−155.68 (14)
C9—C7—C8—O4−78.71 (17)C2—C1—S1—N1−86.01 (16)
N1—C7—C9—C10−78.10 (18)C6—C1—S1—N189.06 (15)
C8—C7—C9—C10159.55 (14)
D—H···AD—HH···AD···AD—H···A
N1—H1B···O1i0.77 (2)2.31 (2)3.076 (2)168.6 (19)
N2—H2A···O2ii0.95 (3)2.06 (3)2.998 (3)172 (3)
O4—H4A···O6iii0.821.822.5804 (18)155
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1B⋯O1i 0.77 (2)2.31 (2)3.076 (2)168.6 (19)
N2—H2A⋯O2ii 0.95 (3)2.06 (3)2.998 (3)172 (3)
O4—H4A⋯O6iii 0.821.822.5804 (18)155

Symmetry codes: (i) ; (ii) ; (iii) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Methyl 3-hydr-oxy-4-oxo-3,4-dihydro-2H-1,2-benzothia-zine-3-carboxyl-ate 1,1-dioxide monohydrate.

Authors:  Muhammad Nadeem Arshad; M Nawaz Tahir; Islam Ullah Khan; Muhammad Shafiq; Waseeq Ahmad Siddiqui
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-09-30

3.  Synthesis and characterization of an N-acylsulfonamide inhibitor of human asparagine synthetase.

Authors:  Lukasz Koroniak; Mihai Ciustea; Jemy A Gutierrez; Nigel G J Richards
Journal:  Org Lett       Date:  2003-06-12       Impact factor: 6.005

4.  (2R)-2-Benzene-sulfonamido-2-phenyl-ethanoic acid.

Authors:  Muhammad Nadeem Arshad; M Nawaz Tahir; Islam Ullah Khan; Muhammad Shafiq; Sarfraz Ahmad
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-04-02
  4 in total
  2 in total

1.  N-Cyclo-hexyl-N-ethyl-4-methyl-benzene-sulfonamide.

Authors:  Zeeshan Haider; Muhammad Nadeem Arshad; Jim Simpson; Islam Ullah Khan; Muhammad Shafiq
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-12-12

2.  N-[4-(N-Cyclo-hexyl-sulfamo-yl)phen-yl]acetamide.

Authors:  Islam Ullah Khan; Mehmet Akkurt; Faiza Anwar; Shahzad Sharif
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-03-20
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.