Literature DB >> 21578903

2-(4-Chloro-phen-yl)imidazo[1,2-a]pyridine-3-carbaldehyde.

Yun-Hui Li, Wen-Yu Liu, Yang Gao, Yu-Peng Wang.   

Abstract

The asymmetric unit of the title compound, C(14)H(9)ClN(2)O, contains two mol-ecules with dihedral angles of 33.52 (11) and 34.58 (11)° between their benzene rings and imidazole ring systems. In the crystal, C-H⋯N and C-H⋯O inter-actions are observed. The crystal examined was found to be a racemic twin.

Entities:  

Year:  2009        PMID: 21578903      PMCID: PMC2971907          DOI: 10.1107/S1600536809048302

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis, see: Burkholder et al. (2001 ▶).

Experimental

Crystal data

C14H9ClN2O M = 256.68 Orthorhombic, a = 21.3367 (13) Å b = 7.2391 (4) Å c = 15.1748 (10) Å V = 2343.9 (2) Å3 Z = 8 Mo Kα radiation μ = 0.31 mm−1 T = 293 K 0.35 × 0.29 × 0.28 mm

Data collection

Bruker SMART APEX CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2002 ▶) T min = 0.870, T max = 0.894 12428 measured reflections 4198 independent reflections 3564 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.089 S = 1.03 4198 reflections 325 parameters 1 restraint H-atom parameters constrained Δρmax = 0.22 e Å−3 Δρmin = −0.18 e Å−3 Absolute structure: Flack (1983 ▶), 1800 Friedel pairs Flack parameter: 0.40 (5) Data collection: SMART (Bruker, 2002 ▶); cell refinement: SAINT (Bruker, 2002 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809048302/hb5204sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809048302/hb5204Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H9ClN2OF(000) = 1056
Mr = 256.68Dx = 1.455 Mg m3
Orthorhombic, Pna21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2c -2nCell parameters from 4265 reflections
a = 21.3367 (13) Åθ = 1.9–26.0°
b = 7.2391 (4) ŵ = 0.31 mm1
c = 15.1748 (10) ÅT = 293 K
V = 2343.9 (2) Å3Block, yellow
Z = 80.35 × 0.29 × 0.28 mm
Bruker APEX CCD diffractometer4198 independent reflections
Radiation source: fine-focus sealed tube3564 reflections with I > 2σ(I)
graphiteRint = 0.026
ω scansθmax = 26.0°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Bruker, 2002)h = −26→26
Tmin = 0.870, Tmax = 0.894k = −8→8
12428 measured reflectionsl = −15→18
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.036H-atom parameters constrained
wR(F2) = 0.089w = 1/[σ2(Fo2) + (0.0461P)2 + 0.2155P] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max < 0.001
4198 reflectionsΔρmax = 0.22 e Å3
325 parametersΔρmin = −0.18 e Å3
1 restraintAbsolute structure: Flack (1983), 1800 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.40 (5)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.38891 (3)0.69710 (12)0.18830 (6)0.0741 (3)
Cl20.86516 (3)1.12252 (11)0.50704 (6)0.0673 (2)
O20.48266 (8)1.0458 (3)0.48167 (13)0.0652 (6)
O10.76678 (8)0.5045 (3)0.22142 (13)0.0620 (5)
N10.73924 (8)0.6319 (3)0.39935 (13)0.0373 (4)
N20.64367 (8)0.7006 (3)0.45277 (14)0.0434 (5)
N40.60866 (9)1.2130 (3)0.24891 (14)0.0403 (5)
C60.57814 (10)0.6745 (3)0.32064 (17)0.0387 (6)
N30.51184 (8)1.1689 (3)0.30384 (13)0.0368 (4)
C70.63898 (10)0.6637 (3)0.36576 (16)0.0345 (5)
C210.61298 (10)1.1699 (3)0.33495 (17)0.0370 (5)
C110.83204 (12)0.6244 (4)0.48197 (19)0.0507 (7)
H110.87500.60380.48570.061*
C170.79144 (11)1.1336 (4)0.45777 (19)0.0467 (6)
C140.70483 (10)0.6813 (3)0.47280 (16)0.0400 (6)
C200.67494 (10)1.1586 (3)0.37871 (17)0.0376 (6)
C80.69729 (10)0.6195 (3)0.32942 (16)0.0360 (5)
C280.54724 (10)1.2129 (3)0.23030 (16)0.0384 (6)
C180.78521 (11)1.0860 (4)0.37049 (19)0.0489 (6)
H180.81981.04670.33820.059*
C220.55419 (10)1.1401 (3)0.37297 (16)0.0380 (5)
C190.72678 (10)1.0975 (3)0.33157 (17)0.0423 (6)
H190.72211.06380.27280.051*
C20.51455 (11)0.7437 (4)0.1929 (2)0.0505 (6)
H20.51100.78460.13500.061*
C90.71397 (11)0.5482 (3)0.24447 (17)0.0434 (6)
H90.68190.53400.20350.052*
C50.52395 (11)0.6241 (3)0.36600 (18)0.0448 (6)
H50.52680.58460.42420.054*
C240.44781 (11)1.1572 (3)0.30118 (19)0.0462 (6)
H240.42511.12740.35150.055*
C270.51591 (12)1.2473 (4)0.15048 (19)0.0492 (6)
H270.53841.27860.10010.059*
C130.73559 (11)0.7049 (4)0.55341 (19)0.0507 (7)
H130.71330.74010.60330.061*
C100.80304 (10)0.6045 (3)0.40399 (19)0.0446 (6)
H100.82570.57270.35390.054*
C260.45240 (12)1.2345 (4)0.14768 (19)0.0526 (7)
H260.43141.25540.09490.063*
C10.57237 (11)0.7353 (4)0.23404 (18)0.0439 (6)
H10.60800.77090.20320.053*
C160.74146 (11)1.1959 (4)0.5060 (2)0.0497 (6)
H160.74661.22860.56490.060*
C40.46599 (12)0.6322 (4)0.32548 (19)0.0497 (6)
H40.43000.59880.35610.060*
C230.53638 (11)1.0703 (3)0.45701 (17)0.0463 (6)
H230.56831.04100.49630.056*
C150.68309 (11)1.2097 (4)0.46614 (18)0.0468 (6)
H150.64911.25360.49830.056*
C120.79878 (12)0.6758 (4)0.5579 (2)0.0513 (7)
H120.81970.68990.61120.062*
C250.41833 (12)1.1899 (4)0.22393 (19)0.0514 (7)
H250.37491.18270.22120.062*
C30.46229 (12)0.6899 (4)0.23968 (19)0.0485 (7)
U11U22U33U12U13U23
Cl10.0499 (4)0.0888 (6)0.0835 (6)0.0081 (4)−0.0283 (4)−0.0004 (5)
Cl20.0459 (3)0.0834 (5)0.0725 (5)−0.0041 (3)−0.0179 (3)0.0060 (4)
O20.0454 (10)0.0979 (15)0.0524 (12)−0.0022 (10)0.0123 (9)0.0151 (11)
O10.0459 (10)0.0937 (16)0.0462 (12)0.0041 (10)0.0086 (9)−0.0156 (10)
N10.0354 (10)0.0400 (11)0.0365 (12)−0.0013 (8)−0.0023 (9)−0.0030 (8)
N20.0392 (10)0.0512 (13)0.0399 (14)0.0004 (9)0.0005 (10)−0.0062 (10)
N40.0380 (10)0.0492 (12)0.0337 (12)−0.0002 (9)0.0021 (9)−0.0003 (9)
C60.0399 (13)0.0367 (12)0.0393 (15)0.0020 (10)−0.0026 (11)−0.0046 (11)
N30.0343 (10)0.0400 (10)0.0361 (12)0.0006 (8)−0.0024 (9)−0.0024 (8)
C70.0354 (11)0.0351 (12)0.0331 (13)0.0008 (9)−0.0014 (10)−0.0026 (10)
C210.0393 (12)0.0365 (12)0.0354 (14)0.0017 (10)0.0030 (11)−0.0013 (10)
C110.0389 (12)0.0547 (16)0.0585 (19)0.0020 (11)−0.0094 (13)−0.0043 (13)
C170.0409 (13)0.0476 (15)0.0517 (18)−0.0066 (11)−0.0098 (13)0.0087 (12)
C140.0388 (12)0.0448 (14)0.0364 (15)0.0006 (11)0.0010 (11)−0.0068 (10)
C200.0357 (12)0.0385 (13)0.0384 (15)−0.0040 (9)−0.0001 (10)0.0044 (11)
C80.0366 (12)0.0379 (12)0.0337 (13)−0.0032 (9)−0.0010 (10)0.0000 (10)
C280.0377 (12)0.0444 (14)0.0333 (14)−0.0012 (10)0.0025 (10)−0.0032 (10)
C180.0387 (13)0.0547 (17)0.0533 (18)0.0038 (11)0.0035 (12)0.0056 (13)
C220.0352 (12)0.0413 (13)0.0375 (14)0.0011 (9)0.0005 (11)−0.0015 (10)
C190.0411 (13)0.0500 (14)0.0359 (14)0.0018 (10)0.0011 (11)0.0014 (11)
C20.0561 (15)0.0541 (17)0.0411 (16)0.0085 (12)−0.0045 (14)0.0009 (13)
C90.0438 (13)0.0479 (15)0.0385 (14)−0.0032 (11)0.0001 (11)−0.0027 (11)
C50.0418 (13)0.0505 (15)0.0421 (15)0.0007 (10)0.0016 (11)−0.0004 (12)
C240.0359 (12)0.0513 (15)0.0513 (17)−0.0028 (11)0.0038 (12)−0.0016 (12)
C270.0536 (15)0.0571 (16)0.0368 (16)−0.0002 (12)−0.0031 (13)−0.0029 (12)
C130.0513 (15)0.0651 (17)0.0357 (16)0.0014 (13)−0.0052 (13)−0.0103 (13)
C100.0341 (12)0.0499 (15)0.0497 (16)0.0014 (11)0.0010 (11)−0.0045 (12)
C260.0545 (15)0.0571 (16)0.0463 (18)0.0074 (13)−0.0121 (14)−0.0076 (13)
C10.0408 (13)0.0475 (15)0.0435 (17)0.0017 (11)0.0008 (11)0.0011 (11)
C160.0509 (14)0.0592 (16)0.0389 (16)−0.0058 (12)−0.0078 (13)−0.0015 (13)
C40.0378 (13)0.0559 (16)0.0555 (18)−0.0022 (11)−0.0025 (12)−0.0025 (13)
C230.0425 (13)0.0539 (15)0.0424 (15)−0.0009 (11)0.0028 (12)0.0038 (12)
C150.0449 (13)0.0561 (17)0.0395 (17)−0.0011 (11)0.0036 (12)0.0015 (12)
C120.0503 (15)0.0621 (17)0.0414 (16)−0.0041 (13)−0.0133 (13)−0.0032 (13)
C250.0402 (13)0.0579 (17)0.0560 (18)0.0024 (12)−0.0091 (13)−0.0064 (13)
C30.0421 (13)0.0475 (15)0.0560 (18)0.0069 (11)−0.0129 (13)−0.0065 (13)
Cl1—C31.750 (3)C28—C271.406 (4)
Cl2—C171.743 (2)C18—C191.382 (3)
O2—C231.219 (3)C18—H180.9300
O1—C91.221 (3)C22—C231.424 (3)
N1—C101.378 (3)C19—H190.9300
N1—C141.382 (3)C2—C31.378 (4)
N1—C81.391 (3)C2—C11.384 (3)
N2—C141.347 (3)C2—H20.9300
N2—C71.351 (3)C9—H90.9300
N4—C281.341 (3)C5—C41.382 (3)
N4—C211.346 (3)C5—H50.9300
C6—C11.391 (4)C24—C251.351 (4)
C6—C51.394 (3)C24—H240.9300
C6—C71.470 (3)C27—C261.359 (3)
N3—C241.369 (3)C27—H270.9300
N3—C281.385 (3)C13—C121.366 (3)
N3—C221.400 (3)C13—H130.9300
C7—C81.398 (3)C10—H100.9300
C21—C221.397 (3)C26—C251.404 (4)
C21—C201.482 (3)C26—H260.9300
C11—C101.343 (4)C1—H10.9300
C11—C121.403 (4)C16—C151.389 (3)
C11—H110.9300C16—H160.9300
C17—C161.370 (4)C4—C31.370 (4)
C17—C181.375 (4)C4—H40.9300
C14—C131.399 (4)C23—H230.9300
C20—C151.388 (4)C15—H150.9300
C20—C191.390 (3)C12—H120.9300
C8—C91.434 (3)C25—H250.9300
C10—N1—C14121.4 (2)C1—C2—H2120.8
C10—N1—C8131.7 (2)O1—C9—C8125.4 (2)
C14—N1—C8106.87 (18)O1—C9—H9117.3
C14—N2—C7105.8 (2)C8—C9—H9117.3
C28—N4—C21105.7 (2)C4—C5—C6120.8 (3)
C1—C6—C5118.4 (2)C4—C5—H5119.6
C1—C6—C7122.3 (2)C6—C5—H5119.6
C5—C6—C7119.2 (2)C25—C24—N3118.6 (2)
C24—N3—C28122.3 (2)C25—C24—H24120.7
C24—N3—C22131.1 (2)N3—C24—H24120.7
C28—N3—C22106.61 (18)C26—C27—C28119.3 (3)
N2—C7—C8111.4 (2)C26—C27—H27120.4
N2—C7—C6120.7 (2)C28—C27—H27120.4
C8—C7—C6127.9 (2)C12—C13—C14119.2 (2)
N4—C21—C22112.0 (2)C12—C13—H13120.4
N4—C21—C20120.6 (2)C14—C13—H13120.4
C22—C21—C20127.4 (2)C11—C10—N1119.0 (2)
C10—C11—C12121.3 (2)C11—C10—H10120.5
C10—C11—H11119.4N1—C10—H10120.5
C12—C11—H11119.4C27—C26—C25120.4 (3)
C16—C17—C18121.5 (2)C27—C26—H26119.8
C16—C17—Cl2119.2 (2)C25—C26—H26119.8
C18—C17—Cl2119.3 (2)C2—C1—C6121.2 (2)
N2—C14—N1111.1 (2)C2—C1—H1119.4
N2—C14—C13129.7 (2)C6—C1—H1119.4
N1—C14—C13119.2 (2)C17—C16—C15119.2 (3)
C15—C20—C19118.5 (2)C17—C16—H16120.4
C15—C20—C21121.7 (2)C15—C16—H16120.4
C19—C20—C21119.8 (2)C3—C4—C5119.2 (3)
N1—C8—C7104.9 (2)C3—C4—H4120.4
N1—C8—C9123.3 (2)C5—C4—H4120.4
C7—C8—C9131.1 (2)O2—C23—C22125.3 (2)
N4—C28—N3111.3 (2)O2—C23—H23117.3
N4—C28—C27130.3 (2)C22—C23—H23117.3
N3—C28—C27118.4 (2)C20—C15—C16120.7 (2)
C17—C18—C19118.9 (2)C20—C15—H15119.7
C17—C18—H18120.5C16—C15—H15119.7
C19—C18—H18120.5C13—C12—C11120.0 (3)
C21—C22—N3104.3 (2)C13—C12—H12120.0
C21—C22—C23131.6 (2)C11—C12—H12120.0
N3—C22—C23123.5 (2)C24—C25—C26121.0 (2)
C18—C19—C20121.1 (2)C24—C25—H25119.5
C18—C19—H19119.4C26—C25—H25119.5
C20—C19—H19119.4C4—C3—C2122.0 (2)
C3—C2—C1118.5 (3)C4—C3—Cl1119.0 (2)
C3—C2—H2120.8C2—C3—Cl1119.1 (2)
D—H···AD—HH···AD···AD—H···A
C11—H11···O2i0.932.543.442 (3)163
C12—H12···N4ii0.932.593.518 (4)172
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C11—H11⋯O2i 0.932.543.442 (3)163
C12—H12⋯N4ii 0.932.593.518 (4)172

Symmetry codes: (i) ; (ii) .

  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  2 in total

1.  Crystal structure, DFT calculation, Hirshfeld surface analysis and energy framework study of 6-bromo-2-(4-bromo-phen-yl)imidazo[1,2-a]pyridine.

Authors:  Hussien Ahmed Khamees; Kumara Chaluvaiah; Nasseem Ahmed El-Khatatneh; Ananda Swamynayaka; Kwong Huey Chong; Jagadeesh Prasad Dasappa; Mahendra Madegowda
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2019-10-03

2.  Crystal Correlation Of Heterocyclic Imidazo[1,2-a]pyridine Analogues and Their Anticholinesterase Potential Evaluation.

Authors:  Huey Chong Kwong; C S Chidan Kumar; Siau Hui Mah; Yew Leng Mah; Tze Shyang Chia; Ching Kheng Quah; Gin Keat Lim; Siddegowda Chandraju
Journal:  Sci Rep       Date:  2019-01-30       Impact factor: 4.379

  2 in total

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