| Literature DB >> 21578899 |
Hadi D Arman, Pavel Poplaukhin, Edward R T Tiekink.
Abstract
The asymmetric unit in the title compound, C(5)H(5)NO, comprises two independent but virtually identical mol-ecules of 2-pyridone, and represents a monoclinic polymorph of the previously reported ortho-rhom-bic (P2(1)2(1)2(1)) form [Penfold (1953 ▶). Acta Cryst.6, 591-600; Ohms et al. (1984 ▶). Z. Kristallogr.169, 185-200; Yang & Craven (1998 ▶). Acta Cryst. B54, 912-920]. The independent mol-ecules are linked into supra-molecular dimers via eight-membered {⋯HNC(O)}(2) amide synthons in contrast to the helical supra-molecular chains, mediated by {⋯HNC(O)} links, found in the ortho-rhom-bic form.Entities:
Year: 2009 PMID: 21578899 PMCID: PMC2972078 DOI: 10.1107/S1600536809049496
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C5H5NO | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 3046 reflections |
| θ = 3.3–40.2° | |
| µ = 0.10 mm−1 | |
| β = 92.242 (7)° | Prism, colourless |
| 0.44 × 0.39 × 0.15 mm | |
| Rigaku AFC12K/SATURN724 diffractometer | 1903 independent reflections |
| Radiation source: fine-focus sealed tube | 1724 reflections with |
| graphite | |
| ω scans | θmax = 26.5°, θmin = 2.5° |
| Absorption correction: multi-scan ( | |
| 6582 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1903 reflections | (Δ/σ)max = 0.001 |
| 127 parameters | Δρmax = 0.21 e Å−3 |
| 0 restraints | Δρmin = −0.22 e Å−3 |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.27541 (14) | 0.36020 (6) | 0.47704 (10) | 0.0239 (2) | |
| N1 | −0.07408 (17) | 0.31779 (7) | 0.48531 (12) | 0.0201 (3) | |
| H1N | −0.1007 | 0.3587 | 0.5450 | 0.024* | |
| C1 | 0.1321 (2) | 0.30993 (8) | 0.43716 (14) | 0.0195 (3) | |
| C2 | −0.2397 (2) | 0.26660 (8) | 0.44686 (15) | 0.0232 (3) | |
| H2 | −0.3795 | 0.2769 | 0.4819 | 0.028* | |
| C3 | −0.2074 (2) | 0.20065 (8) | 0.35857 (15) | 0.0236 (3) | |
| H3 | −0.3219 | 0.1641 | 0.3330 | 0.028* | |
| C4 | 0.0019 (2) | 0.18832 (8) | 0.30615 (14) | 0.0224 (3) | |
| H4 | 0.0289 | 0.1426 | 0.2450 | 0.027* | |
| C5 | 0.1649 (2) | 0.24113 (8) | 0.34226 (14) | 0.0209 (3) | |
| H5 | 0.3033 | 0.2324 | 0.3039 | 0.025* | |
| O2 | −0.14759 (15) | 0.44304 (6) | 0.67815 (11) | 0.0263 (3) | |
| N2 | 0.19925 (17) | 0.48837 (7) | 0.67120 (12) | 0.0204 (3) | |
| H2N | 0.2238 | 0.4519 | 0.6027 | 0.024* | |
| C6 | −0.0049 (2) | 0.49182 (8) | 0.72495 (14) | 0.0199 (3) | |
| C7 | −0.0344 (2) | 0.55309 (8) | 0.83511 (15) | 0.0236 (3) | |
| H7 | −0.1717 | 0.5592 | 0.8765 | 0.028* | |
| C8 | 0.1311 (2) | 0.60263 (9) | 0.88132 (16) | 0.0267 (3) | |
| H8 | 0.1078 | 0.6427 | 0.9547 | 0.032* | |
| C9 | 0.3370 (2) | 0.59536 (9) | 0.82168 (17) | 0.0276 (3) | |
| H9 | 0.4526 | 0.6299 | 0.8539 | 0.033* | |
| C10 | 0.3652 (2) | 0.53746 (9) | 0.71679 (15) | 0.0243 (3) | |
| H10 | 0.5022 | 0.5313 | 0.6751 | 0.029* |
| O1 | 0.0186 (5) | 0.0256 (5) | 0.0277 (5) | −0.0021 (4) | 0.0025 (4) | −0.0048 (4) |
| N1 | 0.0186 (6) | 0.0198 (5) | 0.0219 (5) | 0.0010 (4) | 0.0027 (4) | −0.0035 (4) |
| C1 | 0.0180 (6) | 0.0210 (6) | 0.0195 (6) | 0.0012 (5) | 0.0000 (5) | 0.0018 (5) |
| C2 | 0.0178 (6) | 0.0248 (7) | 0.0272 (7) | −0.0013 (5) | 0.0026 (5) | −0.0022 (5) |
| C3 | 0.0208 (7) | 0.0220 (7) | 0.0281 (7) | −0.0021 (5) | 0.0013 (5) | −0.0036 (5) |
| C4 | 0.0244 (7) | 0.0202 (6) | 0.0227 (6) | 0.0036 (5) | −0.0004 (5) | −0.0025 (5) |
| C5 | 0.0179 (6) | 0.0239 (7) | 0.0211 (6) | 0.0031 (5) | 0.0031 (5) | −0.0010 (5) |
| O2 | 0.0206 (5) | 0.0245 (5) | 0.0342 (5) | −0.0041 (4) | 0.0062 (4) | −0.0078 (4) |
| N2 | 0.0209 (6) | 0.0183 (5) | 0.0221 (5) | −0.0003 (4) | 0.0029 (4) | −0.0014 (4) |
| C6 | 0.0191 (6) | 0.0183 (6) | 0.0222 (6) | 0.0011 (5) | 0.0009 (5) | 0.0029 (5) |
| C7 | 0.0212 (6) | 0.0252 (7) | 0.0245 (7) | 0.0031 (5) | 0.0025 (5) | −0.0007 (5) |
| C8 | 0.0268 (7) | 0.0262 (7) | 0.0270 (7) | 0.0035 (5) | −0.0010 (6) | −0.0063 (5) |
| C9 | 0.0227 (7) | 0.0256 (7) | 0.0342 (8) | −0.0026 (5) | −0.0024 (6) | −0.0043 (6) |
| C10 | 0.0176 (6) | 0.0251 (7) | 0.0304 (7) | −0.0016 (5) | 0.0015 (5) | 0.0016 (6) |
| O1—C1 | 1.2529 (16) | O2—C6 | 1.2530 (16) |
| N1—C2 | 1.3597 (17) | N2—C10 | 1.3567 (17) |
| N1—C1 | 1.3743 (17) | N2—C6 | 1.3762 (17) |
| N1—H1N | 0.8800 | N2—H2N | 0.8800 |
| C1—C5 | 1.4365 (18) | C6—C7 | 1.4335 (18) |
| C2—C3 | 1.3633 (19) | C7—C8 | 1.3607 (19) |
| C2—H2 | 0.9500 | C7—H7 | 0.9500 |
| C3—C4 | 1.4151 (18) | C8—C9 | 1.412 (2) |
| C3—H3 | 0.9500 | C8—H8 | 0.9500 |
| C4—C5 | 1.3590 (19) | C9—C10 | 1.360 (2) |
| C4—H4 | 0.9500 | C9—H9 | 0.9500 |
| C5—H5 | 0.9500 | C10—H10 | 0.9500 |
| C2—N1—C1 | 124.33 (11) | C10—N2—C6 | 124.37 (11) |
| C2—N1—H1N | 117.8 | C10—N2—H2N | 117.8 |
| C1—N1—H1N | 117.8 | C6—N2—H2N | 117.8 |
| O1—C1—N1 | 120.32 (11) | O2—C6—N2 | 120.04 (12) |
| O1—C1—C5 | 124.83 (12) | O2—C6—C7 | 124.99 (12) |
| N1—C1—C5 | 114.84 (11) | N2—C6—C7 | 114.96 (11) |
| N1—C2—C3 | 120.67 (12) | C8—C7—C6 | 121.03 (12) |
| N1—C2—H2 | 119.7 | C8—C7—H7 | 119.5 |
| C3—C2—H2 | 119.7 | C6—C7—H7 | 119.5 |
| C2—C3—C4 | 118.00 (12) | C7—C8—C9 | 120.93 (13) |
| C2—C3—H3 | 121.0 | C7—C8—H8 | 119.5 |
| C4—C3—H3 | 121.0 | C9—C8—H8 | 119.5 |
| C5—C4—C3 | 120.77 (12) | C10—C9—C8 | 118.12 (13) |
| C5—C4—H4 | 119.6 | C10—C9—H9 | 120.9 |
| C3—C4—H4 | 119.6 | C8—C9—H9 | 120.9 |
| C4—C5—C1 | 121.36 (12) | N2—C10—C9 | 120.59 (12) |
| C4—C5—H5 | 119.3 | N2—C10—H10 | 119.7 |
| C1—C5—H5 | 119.3 | C9—C10—H10 | 119.7 |
| C2—N1—C1—O1 | 179.47 (12) | C10—N2—C6—O2 | −178.77 (12) |
| C2—N1—C1—C5 | −1.04 (18) | C10—N2—C6—C7 | 0.61 (18) |
| C1—N1—C2—C3 | 2.1 (2) | O2—C6—C7—C8 | 178.83 (13) |
| N1—C2—C3—C4 | −1.3 (2) | N2—C6—C7—C8 | −0.51 (19) |
| C2—C3—C4—C5 | −0.4 (2) | C6—C7—C8—C9 | 0.2 (2) |
| C3—C4—C5—C1 | 1.5 (2) | C7—C8—C9—C10 | 0.0 (2) |
| O1—C1—C5—C4 | 178.72 (12) | C6—N2—C10—C9 | −0.4 (2) |
| N1—C1—C5—C4 | −0.74 (18) | C8—C9—C10—N2 | 0.1 (2) |
| H··· | ||||
| N1—H1n···O2 | 0.88 | 1.86 | 2.7450 (16) | 177 |
| N2—H2n···O1 | 0.88 | 1.92 | 2.7915 (16) | 171 |
| C2—H2···O1i | 0.95 | 2.53 | 3.3943 (18) | 150 |
| C4—H4···O2ii | 0.95 | 2.54 | 3.2989 (18) | 137 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1n⋯O2 | 0.88 | 1.86 | 2.7450 (16) | 177 |
| N2—H2n⋯O1 | 0.88 | 1.92 | 2.7915 (16) | 171 |
| C2—H2⋯O1i | 0.95 | 2.53 | 3.3943 (18) | 150 |
| C4—H4⋯O2ii | 0.95 | 2.54 | 3.2989 (18) | 137 |
Symmetry codes: (i) ; (ii) .