Literature DB >> 21578856

5-Bromo-2-[5-(4-nitro-phen-yl)-3-phenyl-4,5-dihydro-1H-pyrazol-1-yl]pyrimidine.

Jia Hao Goh, Hoong-Kun Fun, Adithya Adhikari, B Kalluraya.   

Abstract

In the title pyrazoline compound, C(19)H(14)BrN(5)O(2), the essentially planar pyrazoline and pyrimidine rings [maximum deviations = 0.013 (1) and 0.009 (1) Å, respectively] are inclined slightly to one another, making a dihedral angle of 10.81 (10)°. The nitro-benzene unit is almost perpendicular to the attached pyrazoline ring, as indicated by the dihedral angle of 84.61 (8)°. In the crystal structure, inter-molecular C-H⋯N contacts link the mol-ecules into dimers in an anti-parallel manner. These dimers are further linked into one-dimensional chains along the b axis via C-H⋯O contacts. The crystal structure is consolidated by three different inter-molecular π-π inter-actions [range of centroid-centroid distances = 3.5160 (11)-3.6912 (11) Å].

Entities:  

Year:  2009        PMID: 21578856      PMCID: PMC2972095          DOI: 10.1107/S1600536809048600

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to and applications of the title compound, see: Hegde et al. (2006 ▶); Kalluraya & Chimbalkar (2001 ▶); Kalluraya et al. (2001 ▶); Rai et al. (2008 ▶); Rathish et al. (2009 ▶); Tawab et al. (1960 ▶). For closely related structures, see: Goh et al. (2009 ▶). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C19H14BrN5O2 M = 424.26 Triclinic, a = 6.9709 (1) Å b = 11.6500 (2) Å c = 12.4365 (2) Å α = 114.969 (1)° β = 103.303 (1)° γ = 91.560 (1)° V = 882.12 (2) Å3 Z = 2 Mo Kα radiation μ = 2.36 mm−1 T = 100 K 0.33 × 0.22 × 0.12 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (; Bruker, 2005 ▶) T min = 0.510, T max = 0.760 28197 measured reflections 3804 independent reflections 3431 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.024 wR(F 2) = 0.060 S = 1.05 3804 reflections 300 parameters All H-atom parameters refined Δρmax = 0.49 e Å−3 Δρmin = −0.30 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809048600/tk2577sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809048600/tk2577Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C19H14BrN5O2Z = 2
Mr = 424.26F(000) = 428
Triclinic, P1Dx = 1.597 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 6.9709 (1) ÅCell parameters from 9873 reflections
b = 11.6500 (2) Åθ = 3.0–33.9°
c = 12.4365 (2) ŵ = 2.36 mm1
α = 114.969 (1)°T = 100 K
β = 103.303 (1)°Block, green
γ = 91.560 (1)°0.33 × 0.22 × 0.12 mm
V = 882.12 (2) Å3
Bruker SMART APEXII CCD area-detector diffractometer3804 independent reflections
Radiation source: fine-focus sealed tube3431 reflections with I > 2σ(I)
graphiteRint = 0.026
φ and ω scansθmax = 27.0°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −8→8
Tmin = 0.510, Tmax = 0.760k = −14→14
28197 measured reflectionsl = −15→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.024Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.060All H-atom parameters refined
S = 1.05w = 1/[σ2(Fo2) + (0.0288P)2 + 0.5594P] where P = (Fo2 + 2Fc2)/3
3804 reflections(Δ/σ)max = 0.001
300 parametersΔρmax = 0.49 e Å3
0 restraintsΔρmin = −0.30 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cyrosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1)K.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br10.32778 (3)0.891599 (17)1.068122 (15)0.02770 (7)
O1−0.3115 (2)0.02211 (12)0.64236 (12)0.0274 (3)
O2−0.0404 (2)−0.01117 (12)0.74511 (11)0.0258 (3)
N10.2287 (2)0.49488 (13)0.46957 (12)0.0175 (3)
N20.2681 (2)0.47661 (13)0.57546 (12)0.0177 (3)
N30.3203 (2)0.54232 (13)0.78176 (13)0.0191 (3)
N40.2364 (2)0.68890 (13)0.69321 (13)0.0182 (3)
N5−0.1294 (2)0.03714 (13)0.68034 (13)0.0205 (3)
C10.1859 (3)0.48220 (17)0.22862 (16)0.0224 (4)
C20.1604 (3)0.4683 (2)0.10980 (17)0.0282 (4)
C30.1682 (3)0.3501 (2)0.01564 (17)0.0300 (4)
C40.2012 (3)0.24641 (19)0.04084 (17)0.0275 (4)
C50.2323 (3)0.26060 (18)0.16071 (16)0.0236 (4)
C60.2252 (2)0.37903 (16)0.25600 (15)0.0201 (3)
C70.2607 (2)0.39338 (15)0.38231 (15)0.0176 (3)
C80.3349 (3)0.29328 (16)0.42148 (17)0.0228 (4)
C90.3406 (3)0.35347 (16)0.55889 (15)0.0191 (3)
C100.2129 (3)0.27153 (15)0.59130 (14)0.0175 (3)
C110.0070 (3)0.24832 (16)0.54497 (15)0.0188 (3)
C12−0.1072 (3)0.17094 (16)0.57339 (15)0.0191 (3)
C13−0.0101 (3)0.11782 (15)0.64817 (15)0.0178 (3)
C140.1942 (3)0.13677 (16)0.69325 (16)0.0211 (3)
C150.3060 (3)0.21486 (16)0.66433 (16)0.0213 (3)
C160.2747 (2)0.57397 (15)0.68747 (15)0.0165 (3)
C170.3326 (3)0.63670 (17)0.89244 (16)0.0207 (3)
C180.2999 (3)0.75881 (16)0.90934 (15)0.0204 (3)
C190.2496 (3)0.78065 (16)0.80562 (16)0.0201 (3)
H1A0.177 (3)0.563 (2)0.2909 (19)0.025 (5)*
H2A0.138 (4)0.540 (2)0.092 (2)0.038 (6)*
H3A0.154 (3)0.340 (2)−0.066 (2)0.037 (6)*
H4A0.206 (3)0.169 (2)−0.020 (2)0.024 (5)*
H5A0.257 (3)0.190 (2)0.178 (2)0.028 (5)*
H8A0.467 (3)0.2771 (19)0.4110 (19)0.024 (5)*
H8B0.250 (3)0.214 (2)0.378 (2)0.031 (6)*
H9A0.478 (3)0.3691 (17)0.6123 (17)0.013 (4)*
H11A−0.055 (3)0.2853 (18)0.4970 (18)0.019 (5)*
H12A−0.245 (3)0.1549 (19)0.5429 (19)0.024 (5)*
H14A0.258 (3)0.0991 (19)0.7416 (19)0.025 (5)*
H15A0.446 (3)0.2291 (19)0.6952 (19)0.025 (5)*
H17A0.372 (3)0.6149 (19)0.9598 (19)0.022 (5)*
H19A0.224 (3)0.8658 (19)0.8141 (18)0.019 (5)*
U11U22U33U12U13U23
Br10.02884 (11)0.02882 (11)0.01659 (9)0.00509 (7)0.00679 (7)0.00134 (7)
O10.0263 (7)0.0275 (7)0.0323 (7)0.0020 (5)0.0112 (6)0.0154 (6)
O20.0386 (8)0.0213 (6)0.0223 (6)0.0044 (5)0.0086 (6)0.0139 (5)
N10.0171 (7)0.0197 (7)0.0145 (6)0.0012 (5)0.0029 (5)0.0070 (5)
N20.0231 (8)0.0155 (6)0.0160 (7)0.0037 (5)0.0070 (6)0.0073 (5)
N30.0199 (7)0.0202 (7)0.0180 (7)0.0023 (6)0.0060 (6)0.0087 (6)
N40.0185 (7)0.0179 (7)0.0174 (7)0.0043 (5)0.0047 (6)0.0068 (6)
N50.0302 (9)0.0147 (6)0.0173 (7)0.0036 (6)0.0107 (6)0.0055 (6)
C10.0190 (9)0.0260 (9)0.0173 (8)0.0058 (7)0.0023 (7)0.0061 (7)
C20.0244 (10)0.0390 (11)0.0209 (9)0.0122 (8)0.0031 (7)0.0140 (8)
C30.0235 (10)0.0459 (12)0.0152 (8)0.0112 (8)0.0028 (7)0.0091 (8)
C40.0202 (9)0.0321 (10)0.0173 (8)0.0036 (8)0.0049 (7)−0.0012 (8)
C50.0185 (9)0.0247 (9)0.0219 (9)0.0023 (7)0.0063 (7)0.0045 (7)
C60.0137 (8)0.0250 (9)0.0169 (8)0.0010 (6)0.0040 (6)0.0049 (7)
C70.0149 (8)0.0172 (7)0.0179 (8)−0.0004 (6)0.0050 (6)0.0051 (6)
C80.0315 (10)0.0164 (8)0.0246 (9)0.0043 (7)0.0156 (8)0.0086 (7)
C90.0212 (9)0.0161 (7)0.0209 (8)0.0036 (6)0.0081 (7)0.0078 (6)
C100.0236 (9)0.0140 (7)0.0149 (7)0.0033 (6)0.0077 (6)0.0050 (6)
C110.0225 (9)0.0184 (8)0.0179 (8)0.0055 (7)0.0056 (7)0.0099 (7)
C120.0204 (9)0.0187 (8)0.0183 (8)0.0046 (7)0.0060 (7)0.0075 (7)
C130.0252 (9)0.0137 (7)0.0153 (7)0.0028 (6)0.0085 (7)0.0057 (6)
C140.0278 (10)0.0197 (8)0.0179 (8)0.0066 (7)0.0054 (7)0.0103 (7)
C150.0194 (9)0.0216 (8)0.0212 (8)0.0032 (7)0.0030 (7)0.0092 (7)
C160.0136 (8)0.0174 (8)0.0173 (8)0.0013 (6)0.0048 (6)0.0064 (6)
C170.0191 (9)0.0255 (9)0.0180 (8)0.0028 (7)0.0059 (7)0.0095 (7)
C180.0176 (8)0.0222 (8)0.0152 (8)0.0020 (7)0.0049 (6)0.0023 (7)
C190.0187 (9)0.0192 (8)0.0204 (8)0.0046 (7)0.0051 (7)0.0067 (7)
Br1—C181.8863 (16)C5—H5A0.94 (2)
O1—N51.228 (2)C6—C71.468 (2)
O2—N51.2337 (19)C7—C81.504 (2)
N1—C71.292 (2)C8—C91.539 (2)
N1—N21.3886 (19)C8—H8A0.97 (2)
N2—C161.365 (2)C8—H8B0.95 (2)
N2—C91.481 (2)C9—C101.519 (2)
N3—C171.332 (2)C9—H9A0.995 (19)
N3—C161.346 (2)C10—C111.391 (2)
N4—C191.334 (2)C10—C151.393 (2)
N4—C161.348 (2)C11—C121.389 (2)
N5—C131.471 (2)C11—H11A0.91 (2)
C1—C21.384 (3)C12—C131.387 (2)
C1—C61.399 (3)C12—H12A0.93 (2)
C1—H1A0.95 (2)C13—C141.379 (3)
C2—C31.394 (3)C14—C151.390 (2)
C2—H2A0.96 (2)C14—H14A0.93 (2)
C3—C41.383 (3)C15—H15A0.94 (2)
C3—H3A0.95 (2)C17—C181.381 (3)
C4—C51.392 (3)C17—H17A0.96 (2)
C4—H4A0.91 (2)C18—C191.388 (2)
C5—C61.400 (2)C19—H19A0.98 (2)
C7—N1—N2107.71 (14)N2—C9—C10113.23 (14)
C16—N2—N1121.50 (13)N2—C9—C8101.32 (13)
C16—N2—C9123.73 (14)C10—C9—C8113.11 (14)
N1—N2—C9113.65 (13)N2—C9—H9A110.2 (10)
C17—N3—C16115.56 (15)C10—C9—H9A107.2 (10)
C19—N4—C16115.45 (14)C8—C9—H9A111.9 (10)
O1—N5—O2123.49 (14)C11—C10—C15119.99 (15)
O1—N5—C13118.57 (14)C11—C10—C9121.01 (15)
O2—N5—C13117.94 (15)C15—C10—C9118.95 (15)
C2—C1—C6120.44 (17)C12—C11—C10120.27 (16)
C2—C1—H1A118.6 (12)C12—C11—H11A119.2 (12)
C6—C1—H1A121.0 (12)C10—C11—H11A120.5 (12)
C1—C2—C3120.15 (19)C13—C12—C11118.28 (16)
C1—C2—H2A120.0 (14)C13—C12—H12A120.8 (12)
C3—C2—H2A119.8 (14)C11—C12—H12A121.0 (12)
C4—C3—C2119.95 (17)C14—C13—C12122.77 (15)
C4—C3—H3A119.4 (14)C14—C13—N5118.41 (15)
C2—C3—H3A120.6 (14)C12—C13—N5118.82 (15)
C3—C4—C5120.16 (17)C13—C14—C15118.17 (16)
C3—C4—H4A120.9 (13)C13—C14—H14A122.0 (13)
C5—C4—H4A118.9 (13)C15—C14—H14A119.8 (13)
C4—C5—C6120.28 (18)C14—C15—C10120.49 (17)
C4—C5—H5A120.2 (13)C14—C15—H15A119.0 (12)
C6—C5—H5A119.5 (13)C10—C15—H15A120.5 (12)
C1—C6—C5118.96 (16)N3—C16—N4127.09 (15)
C1—C6—C7121.19 (15)N3—C16—N2114.49 (14)
C5—C6—C7119.85 (16)N4—C16—N2118.43 (14)
N1—C7—C6121.79 (16)N3—C17—C18122.24 (16)
N1—C7—C8114.40 (15)N3—C17—H17A115.3 (12)
C6—C7—C8123.81 (15)C18—C17—H17A122.4 (12)
C7—C8—C9102.87 (13)C17—C18—C19117.58 (15)
C7—C8—H8A112.2 (12)C17—C18—Br1121.08 (13)
C9—C8—H8A110.4 (12)C19—C18—Br1121.33 (13)
C7—C8—H8B112.8 (13)N4—C19—C18122.05 (16)
C9—C8—H8B111.1 (13)N4—C19—H19A118.1 (11)
H8A—C8—H8B107.5 (18)C18—C19—H19A119.8 (11)
C7—N1—N2—C16170.72 (14)C15—C10—C11—C121.4 (2)
C7—N1—N2—C92.42 (18)C9—C10—C11—C12178.62 (15)
C6—C1—C2—C31.8 (3)C10—C11—C12—C13−0.2 (2)
C1—C2—C3—C40.1 (3)C11—C12—C13—C14−1.2 (2)
C2—C3—C4—C5−1.8 (3)C11—C12—C13—N5179.18 (14)
C3—C4—C5—C61.6 (3)O1—N5—C13—C14178.59 (15)
C2—C1—C6—C5−1.9 (3)O2—N5—C13—C14−0.9 (2)
C2—C1—C6—C7177.49 (16)O1—N5—C13—C12−1.8 (2)
C4—C5—C6—C10.2 (3)O2—N5—C13—C12178.73 (14)
C4—C5—C6—C7−179.20 (16)C12—C13—C14—C151.5 (3)
N2—N1—C7—C6177.49 (14)N5—C13—C14—C15−178.92 (15)
N2—N1—C7—C8−2.15 (19)C13—C14—C15—C10−0.3 (3)
C1—C6—C7—N110.4 (2)C11—C10—C15—C14−1.1 (2)
C5—C6—C7—N1−170.23 (16)C9—C10—C15—C14−178.41 (15)
C1—C6—C7—C8−170.01 (16)C17—N3—C16—N4−1.6 (2)
C5—C6—C7—C89.4 (2)C17—N3—C16—N2178.34 (14)
N1—C7—C8—C91.11 (19)C19—N4—C16—N31.4 (2)
C6—C7—C8—C9−178.52 (15)C19—N4—C16—N2−178.54 (14)
C16—N2—C9—C1068.9 (2)N1—N2—C16—N3−178.10 (14)
N1—N2—C9—C10−123.07 (15)C9—N2—C16—N3−11.0 (2)
C16—N2—C9—C8−169.64 (15)N1—N2—C16—N41.8 (2)
N1—N2—C9—C8−1.64 (17)C9—N2—C16—N4168.92 (14)
C7—C8—C9—N20.35 (16)C16—N3—C17—C180.3 (2)
C7—C8—C9—C10121.86 (15)N3—C17—C18—C191.0 (3)
N2—C9—C10—C1149.0 (2)N3—C17—C18—Br1−177.75 (12)
C8—C9—C10—C11−65.5 (2)C16—N4—C19—C180.1 (2)
N2—C9—C10—C15−133.70 (16)C17—C18—C19—N4−1.2 (3)
C8—C9—C10—C15111.76 (18)Br1—C18—C19—N4177.53 (13)
D—H···AD—HH···AD···AD—H···A
C8—H8B···O2i0.95 (2)2.41 (2)3.352 (2)176.0 (17)
C11—H11A···N4ii0.92 (2)2.56 (2)3.431 (2)160.5 (18)
C19—H19A···O2iii0.98 (2)2.58 (2)3.412 (3)143.3 (17)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C8—H8B⋯O2i 0.95 (2)2.41 (2)3.352 (2)176.0 (17)
C11—H11A⋯N4ii 0.92 (2)2.56 (2)3.431 (2)160.5 (18)
C19—H19A⋯O2iii 0.98 (2)2.58 (2)3.412 (3)143.3 (17)

Symmetry codes: (i) ; (ii) ; (iii) .

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